FFCP PHASE1:Hg19::chr2:171673341..171673352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2571 | |EntrezGene=2571 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4092 | |HGNC=4092 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-69bp_to_ENST00000344257_5end | |association_with_transcript=-69bp_to_ENST00000344257_5end | ||
|cluster_id=chr2:171673341..171673352,+ | |||
|coexpression_cluster_id=C3 | |coexpression_cluster_id=C3 | ||
|description=CAGE_peak_3_at_GAD1_5end | |description=CAGE_peak_3_at_GAD1_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;4.62e-07;2 | |ontology_enrichment_celltype_v019=CL:0000047;4.62e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.26e-09,8 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.08e-10;82!UBERON:0010122;1.06e-07;2 | |ontology_enrichment_development_v019=UBERON:0006601;7.08e-10;82!UBERON:0010122;1.06e-07;2 | ||
|ontology_enrichment_disease=DOID:305!8.51e-17!106;DOID:0050687!4.62e-16!143;DOID:14566!1.60e-14!239;DOID:162!1.82e-14!235 | |ontology_enrichment_disease=DOID:305!8.51e-17!106;DOID:0050687!4.62e-16!143;DOID:14566!1.60e-14!239;DOID:162!1.82e-14!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.80e-45!82;UBERON:0005743!2.17e-44!86;UBERON:0001049!2.50e-42!57;UBERON:0005068!2.50e-42!57;UBERON:0006241!2.50e-42!57;UBERON:0007135!2.50e-42!57;UBERON:0000073!3.41e-40!94;UBERON:0001016!3.41e-40!94;UBERON:0000955!3.21e-38!69;UBERON:0006238!3.21e-38!69;UBERON:0002780!2.26e-37!41;UBERON:0001890!2.26e-37!41;UBERON:0006240!2.26e-37!41;UBERON:0003080!4.29e-36!42;UBERON:0002616!5.76e-35!59;UBERON:0001893!7.31e-32!34;UBERON:0002020!7.86e-32!34;UBERON:0003528!7.86e-32!34;UBERON:0002791!9.26e-31!33;UBERON:0001869!1.25e-30!32;UBERON:0003075!2.50e-29!86;UBERON:0007284!2.50e-29!86;UBERON:0002346!4.72e-28!90;UBERON:0003056!6.63e-26!61;UBERON:0000956!3.22e-23!25;UBERON:0000203!3.22e-23!25;UBERON:0002619!2.78e-22!22;UBERON:0001950!1.84e-20!20;UBERON:0000033!7.77e-20!123;UBERON:0000153!3.98e-19!129;UBERON:0007811!3.98e-19!129;UBERON:0004121!7.18e-17!169;UBERON:0000924!1.71e-16!173;UBERON:0006601!1.71e-16!173;UBERON:0007023!7.37e-15!115;UBERON:0002420!3.52e-10!9;UBERON:0007245!3.52e-10!9;UBERON:0010009!3.52e-10!9;UBERON:0010011!3.52e-10!9;UBERON:0000454!3.52e-10!9;UBERON:0002308!5.17e-10!9;UBERON:0000125!5.17e-10!9;UBERON:0000025!1.10e-08!194;UBERON:0009663!2.98e-08!7;UBERON:0001737!6.27e-08!9;UBERON:0003076!7.99e-08!15;UBERON:0003057!7.99e-08!15;UBERON:0000064!1.21e-07!219;UBERON:0000200!1.47e-07!6;UBERON:0000477!1.70e-07!286;UBERON:0001871!3.34e-07!7;UBERON:0001894!7.28e-07!7;UBERON:0006222!7.28e-07!7;UBERON:0001872!7.43e-07!5 | |ontology_enrichment_uberon=UBERON:0001017!9.80e-45!82;UBERON:0005743!2.17e-44!86;UBERON:0001049!2.50e-42!57;UBERON:0005068!2.50e-42!57;UBERON:0006241!2.50e-42!57;UBERON:0007135!2.50e-42!57;UBERON:0000073!3.41e-40!94;UBERON:0001016!3.41e-40!94;UBERON:0000955!3.21e-38!69;UBERON:0006238!3.21e-38!69;UBERON:0002780!2.26e-37!41;UBERON:0001890!2.26e-37!41;UBERON:0006240!2.26e-37!41;UBERON:0003080!4.29e-36!42;UBERON:0002616!5.76e-35!59;UBERON:0001893!7.31e-32!34;UBERON:0002020!7.86e-32!34;UBERON:0003528!7.86e-32!34;UBERON:0002791!9.26e-31!33;UBERON:0001869!1.25e-30!32;UBERON:0003075!2.50e-29!86;UBERON:0007284!2.50e-29!86;UBERON:0002346!4.72e-28!90;UBERON:0003056!6.63e-26!61;UBERON:0000956!3.22e-23!25;UBERON:0000203!3.22e-23!25;UBERON:0002619!2.78e-22!22;UBERON:0001950!1.84e-20!20;UBERON:0000033!7.77e-20!123;UBERON:0000153!3.98e-19!129;UBERON:0007811!3.98e-19!129;UBERON:0004121!7.18e-17!169;UBERON:0000924!1.71e-16!173;UBERON:0006601!1.71e-16!173;UBERON:0007023!7.37e-15!115;UBERON:0002420!3.52e-10!9;UBERON:0007245!3.52e-10!9;UBERON:0010009!3.52e-10!9;UBERON:0010011!3.52e-10!9;UBERON:0000454!3.52e-10!9;UBERON:0002308!5.17e-10!9;UBERON:0000125!5.17e-10!9;UBERON:0000025!1.10e-08!194;UBERON:0009663!2.98e-08!7;UBERON:0001737!6.27e-08!9;UBERON:0003076!7.99e-08!15;UBERON:0003057!7.99e-08!15;UBERON:0000064!1.21e-07!219;UBERON:0000200!1.47e-07!6;UBERON:0000477!1.70e-07!286;UBERON:0001871!3.34e-07!7;UBERON:0001894!7.28e-07!7;UBERON:0006222!7.28e-07!7;UBERON:0001872!7.43e-07!5 | ||
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| ||
|short_description=p3@GAD1 | |short_description=p3@GAD1 | ||
}} | }} |
Latest revision as of 03:36, 18 September 2015
Short description: | p3@GAD1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GAD1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -69bp_to_ENST00000344257_5end |
EntrezGene: | GAD1 |
HGNC: | 4092 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 1.26e-09 | 8 |