FFCP PHASE1:Hg19::chr7:29234032..29234043,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1124 | |EntrezGene=1124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1944 | |HGNC=1944 | ||
|TSSclassifier=strong | |||
|UniProt=P52757 | |UniProt=P52757 | ||
|association_with_transcript=4bp_to_ENST00000222792_5end | |association_with_transcript=4bp_to_ENST00000222792_5end | ||
|cluster_id=chr7:29234032..29234043,+ | |||
|coexpression_cluster_id=C1458 | |coexpression_cluster_id=C1458 | ||
|description=CAGE_peak_16_at_CHN2_5end | |description=CAGE_peak_16_at_CHN2_5end | ||
|id=chr7:29234032..29234043,+ | |id=chr7:29234032..29234043,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.18e-14;5!CL:0002032;6.46e-09;1!CL:0000557;6.46e-09;1!CL:0002591;6.46e-09;1!CL:0000163;2.29e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.83e-14,5;CL:0002028,1.83e-14,5;CL:0002591,9.17e-09,1;CL:0000163,2.91e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;2.00e-24;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002037;1.66e-12;6!UBERON:0000073;1.83e-11;53!UBERON:0002616;1.83e-11;53!UBERON:0004733;1.13e-10;12!UBERON:0002028;1.13e-10;12!UBERON:0000955;2.89e-10;68!UBERON:0004732;7.30e-10;13!UBERON:0001950;4.05e-09;20!UBERON:0002038;6.46e-09;1!UBERON:0009661;6.46e-09;1!UBERON:0002950;6.46e-09;1!UBERON:0001891;6.46e-09;1!UBERON:0002780;7.96e-09;41!UBERON:0001890;7.96e-09;41!UBERON:0002784;1.07e-08;4!UBERON:0002680;1.69e-08;9!UBERON:0001895;1.69e-08;9!UBERON:0001016;2.09e-08;83!UBERON:0002619;2.62e-08;22!UBERON:0002791;1.32e-07;32!UBERON:0000956;2.52e-07;25!UBERON:0000203;2.52e-07;25!UBERON:0002021;2.87e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.44e-18,53;UBERON:0002616,1.44e-18,53;UBERON:0001049,1.76e-17,56;UBERON:0005068,1.76e-17,56;UBERON:0006241,1.76e-17,56;UBERON:0007135,1.76e-17,56;UBERON:0000955,2.20e-16,68;UBERON:0006238,2.20e-16,68;UBERON:0001017,9.84e-16,81;UBERON:0001016,6.06e-14,89;UBERON:0003075,2.16e-13,82;UBERON:0007284,2.16e-13,82;UBERON:0002346,1.14e-12,86;UBERON:0002037,1.45e-12,6;UBERON:0006215,1.45e-12,6;UBERON:0002780,9.67e-11,41;UBERON:0001890,9.67e-11,41;UBERON:0003080,9.67e-11,41;UBERON:0006240,9.67e-11,41;UBERON:0004733,1.19e-10,12;UBERON:0002028,1.19e-10,12;UBERON:0007277,1.19e-10,12;UBERON:0010371,4.27e-10,104;UBERON:0004732,7.66e-10,13;UBERON:0001950,3.49e-09,20;UBERON:0002784,9.20e-09,4;UBERON:0002038,1.16e-08,1;UBERON:0009661,1.16e-08,1;UBERON:0002950,1.16e-08,1;UBERON:0001891,1.16e-08,1;UBERON:0009616,1.16e-08,1;UBERON:0010286,1.16e-08,1;UBERON:0003076,1.51e-08,15;UBERON:0003057,1.51e-08,15;UBERON:0002680,1.55e-08,9;UBERON:0001895,1.55e-08,9;UBERON:0010092,1.55e-08,9;UBERON:0002619,2.29e-08,22;UBERON:0002791,5.62e-08,32;UBERON:0003528,1.72e-07,34;UBERON:0002020,1.72e-07,34;UBERON:0001893,1.72e-07,34;UBERON:0010314,1.75e-07,132;UBERON:0000956,2.24e-07,25;UBERON:0000203,2.24e-07,25;UBERON:0002021,2.62e-07,5;UBERON:0004121,3.16e-07,171;UBERON:0000924,3.16e-07,171;UBERON:0006601,3.16e-07,171;UBERON:0003056,6.29e-07,61 | |||
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|short_description=p16@CHN2 | |short_description=p16@CHN2 | ||
}} | }} |
Latest revision as of 04:03, 18 September 2015
Short description: | p16@CHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_CHN2_5end |
Coexpression cluster: | C1458_cerebellum_small_temporal_parietal_occipital_somatostatinoma_neuroectodermal |
Association with transcript: | 4bp_to_ENST00000222792_5end |
EntrezGene: | CHN2 |
HGNC: | 1944 |
UniProt: | P52757 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.83e-14 | 5 |
basophil mast progenitor cell | 1.83e-14 | 5 |
smooth muscle cell of the pulmonary artery | 9.17e-09 | 1 |
endocrine cell | 2.91e-08 | 9 |