FFCP PHASE1:Hg19::chr21:34774960..34774967,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:34774960..34774967,+ to FFCP PHASE1:Hg19::chr21:34774960..34774967,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3460 | |EntrezGene=3460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5440 | |HGNC=5440 | ||
|TSSclassifier=strong | |||
|UniProt=P38484,A8K881 | |UniProt=P38484,A8K881 | ||
|association_with_transcript=-234bp_to_ENST00000290219,NM_005534,uc002yrp.3,uc002yrq.3,uc010gma.2_5end | |||
|cluster_id=chr21:34774960..34774967,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_5_at_IFNGR2_5end | |||
|id=chr21:34774960..34774967,+ | |||
|ontology_enrichment_celltype=CL:0000766!1.48e-41!76;CL:0002057!1.47e-38!42;CL:0000557!2.41e-35!71;CL:0002194!2.94e-35!63;CL:0000576!2.94e-35!63;CL:0000040!2.94e-35!63;CL:0000559!2.94e-35!63;CL:0002009!3.28e-35!65;CL:0000860!1.35e-34!45;CL:0000839!6.43e-33!70;CL:0000763!1.11e-25!112;CL:0000049!1.11e-25!112;CL:0000738!1.30e-17!140;CL:0002087!9.45e-14!119;CL:0000037!1.15e-12!172;CL:0000566!1.15e-12!172;CL:0002031!1.41e-12!124;CL:0002032!1.12e-11!165;CL:0000837!1.12e-11!165;CL:0000988!1.34e-10!182;CL:0002393!1.64e-08!9;CL:0002397!1.64e-08!9;CL:0000094!2.44e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.41e-66;33!CL:0002057;1.41e-66;33!CL:0000473;1.78e-61;39!CL:0000234;1.78e-61;39!CL:0000576;4.08e-48;48!CL:0000766;2.01e-39;69!CL:0000763;1.85e-19;100!CL:0000094;1.89e-17;8!CL:0002393;4.66e-14;6!CL:0002397;4.66e-14;6!CL:0000081;2.91e-12;11!CL:0002087;7.19e-12;104!CL:0000738;2.36e-11;136!CL:0000235;2.20e-09;6!CL:0000775;8.17e-08;3!CL:0000767;4.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,8.67e-92,48;CL:0000234,8.67e-92,48;CL:0000766,2.63e-86,72;CL:0000860,7.66e-84,42;CL:0002057,7.66e-84,42;CL:0002009,1.45e-77,61;CL:0002194,6.17e-77,59;CL:0000576,6.17e-77,59;CL:0000040,6.17e-77,59;CL:0000559,6.17e-77,59;CL:0000557,2.16e-72,67;CL:0000839,2.11e-67,66;CL:0000763,5.96e-57,108;CL:0000049,5.96e-57,108;CL:0000738,7.83e-46,136;CL:0002087,2.48e-38,115;CL:0000037,2.06e-35,168;CL:0002032,2.06e-34,161;CL:0000837,2.06e-34,161;CL:0002031,2.56e-34,120;CL:0000988,8.76e-33,177;CL:0000094,7.94e-18,8;CL:0000134,6.49e-15,354;CL:0002320,2.74e-14,361;CL:0000081,1.58e-12,11;CL:0002393,3.43e-12,9;CL:0002397,3.43e-12,9;CL:0000219,4.28e-12,386;CL:0000048,1.90e-09,427;CL:0000235,3.05e-09,6;CL:0000034,3.72e-09,441;CL:0000723,4.36e-09,433;CL:0000775,5.99e-08,3;CL:0000767,2.63e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-59;42!CL:0000049;1.98e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.76e-34!102;UBERON:0003061!5.76e-34!102;UBERON:0002371!1.61e-30!80;UBERON:0002193!5.29e-30!112;UBERON:0001474!1.30e-26!86;UBERON:0004765!5.56e-23!101;UBERON:0001434!5.56e-23!101;UBERON:0007023!7.79e-20!115;UBERON:0002405!1.09e-19!115;UBERON:0003081!2.04e-11!216;UBERON:0002204!6.11e-09!167;UBERON:0000479!1.39e-08!787;UBERON:0000062!2.37e-08!511 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.29e-62,76;UBERON:0002390,8.31e-59,98;UBERON:0003061,8.31e-59,98;UBERON:0001474,1.18e-56,82;UBERON:0002193,5.92e-52,108;UBERON:0004765,2.17e-50,90;UBERON:0002405,2.57e-48,93;UBERON:0001434,5.79e-44,100;UBERON:0003081,1.28e-22,203;UBERON:0002204,7.94e-21,167;UBERON:0002384,1.95e-13,371;UBERON:0000926,6.73e-12,315;UBERON:0004120,6.73e-12,315;UBERON:0006603,6.73e-12,315 | |||
|phase1_expression=0,1.2846031433459,0.281908808191942,1.0007329835313,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.91914699048606,2.32224184974114,1.83884244895785,0,0,0,0,0,10.5259127621057,18.8511780621933,19.096956622995,0,0.647787332037959,1.03030227053675,11.7772573411447,6.80176698639857,8.24785808038575,16.967319694115,4.93401465626191,6.19412741790207,6.61692502340946,2.30544635876191,3.07426898855161,13.7898272294647,7.10033151942209,2.70852973188684,17.3182952379196,5.45812300115692,4.26974620445661,27.2414664210103,9.30694178520671,19.8194508997703,3.29851300186716,2.19410023383795,5.54092175692502,24.9579945220582,10.7803192691317,13.7020894779026,2.51248665256743,4.69334626578181,2.6062661364614,11.502590550034,12.5214396235772,8.86094684834476,2.11255286311942,2.97646019951061,1.67726916406701,2.69588714751588,4.05477610672067,1.76798145366788,0.855038231223746,2.38700012638908,0.365328307529268,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,1.68152568894461,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0.348259474598534,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,4.43190610957315,0,3.26988557035202,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0.414656231081544,0.288239906833923,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,1.2162378064119,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0.335032530668698,0,6.74106321552464,2.99161459204025,4.97298616123243,0,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0,2.27407504055985,0,0,0,0,0,0,0.82707210449155,9.70713903683776,3.30855429190677,0,0,0,0,0.920771839728375,1.40330047216537,0.128139149255701,0.511707249066704,0.321707842287215,1.48418066444991,0,0.532685175939381,0,0,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,1.30012049207304,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.392996164052485,0,0,0,0.329294892959902,0,0,0,1.34060455107157,0,0.564862804660675,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.238231775457789,0,1.29694662238543,0,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.561594356226918,0.228234679033192,0,0,0,0,0,0,0.687010689511529,0,0,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0.562677665642051,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,7.18449277040819,0,0,0.649376687132959,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.221158519862449,0,0.219385397153973,0,0,0.307801034015188,0.341826167541004,0,0.0897576444097721,0,0.957003479195758,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,2.21153028699708,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,0.126621591911757,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,1.27746588066972,0,0,0.558564802544508,0,0.717873024576814,0.399358000997982,0,0.223171457441873,0.268733889946905,1.08089965062721,0,0,0,0,0,0,0,0.544813624446302,0,0,0.83088067605837,0,4.6428117273477,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,1.42939065274673,1.32418394073086,0.25426853765475,0,0,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,1.16354660725395,0.52893040697076,0,0,2.24253566392159,0,1.65695622138878,0.496166021811951,0,0,0,2.1760712134779,0.7520696820681,0.306345576763462,0.655745261419609,0,0,0,1.001527445652,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,1.04349012362347,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0.138314504928436,0,0,0,0.11796972334774,0,0,1.1441462864015,0,0,0.376051641746286,0.40341013740704,0.781514011233092,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,0.175871244359621,0,2.14280734351315,0,2.42786241694653,0,0.443511850813194,0,0,0.271878931907327,0.0657727735628491,0,0,0.235479278551542,0.471346769748006,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,1.37415926980462,0.297046400327086,0,0.169927114687817,0.845855261818682,0.709036767709349,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0.872701380680755,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,2.41167717140561,0.829169439458779,0.310298987585686,0,0,0.193766729508018,0.806971285846153,0,0.0636471582781649,0.202117188958219,0.870866991587845,0.342233301085281,0.134704106029175,1.00411087549747,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0.813792356631477,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,1.2846031433459,0.281908808191942,1.0007329835313,0.446961094427288,1.74467704820074,2.53299878168311,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75354993794233,1.91914699048606,2.32224184974114,1.83884244895785,0,0,0,0,0,10.5259127621057,18.8511780621933,19.096956622995,0,0.647787332037959,1.03030227053675,11.7772573411447,6.80176698639857,8.24785808038575,16.967319694115,4.93401465626191,6.19412741790207,6.61692502340946,2.30544635876191,3.07426898855161,13.7898272294647,7.10033151942209,2.70852973188684,17.3182952379196,5.45812300115692,4.26974620445661,27.2414664210103,9.30694178520671,19.8194508997703,3.29851300186716,2.19410023383795,5.54092175692502,24.9579945220582,10.7803192691317,13.7020894779026,2.51248665256743,4.69334626578181,2.6062661364614,11.502590550034,12.5214396235772,8.86094684834476,2.11255286311942,2.97646019951061,1.67726916406701,2.69588714751588,4.05477610672067,1.76798145366788,0.855038231223746,2.38700012638908,0.365328307529268,0,0,0,0,0,0,0,0,0,1.17447437874188,0,0,1.68152568894461,0,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.0654895377488563,0,0.370784442784429,0,0.348259474598534,0,0.476981248610684,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.9068250461638,3.87780264148325,0,0.496971951695318,0,0.132409180813219,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0.298897361103602,0,0,0.140450806702248,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0,0.300476117813194,0,0.179389635688862,0.427114777637135,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0,0,0.386521706326594,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0.555530670951178,0,0,0,0,0,0,0,0,0,0,4.43190610957315,0,3.26988557035202,0,0.16798212819886,0,0.0895585227028483,0.290633938513962,0,0,0,0.414656231081544,0.288239906833923,0.25248486685276,0.063497894292169,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0.531876233169741,0,0,0,0.266422179016099,0,0,0.823240336780769,0,0,0,0,0,0,1.2162378064119,3.01354254859276,2.10833939483032,0,0,0,0,0,0,0,0,0,0.385029108839245,0,0,0,0.335032530668698,0,6.74106321552464,2.99161459204025,4.97298616123243,0,0,0,0,0.356857977594324,0.157702415033935,0.585707074963566,0,2.27407504055985,0,0,0,0,0,0,0.82707210449155,9.70713903683776,3.30855429190677,0,0,0,0,0.920771839728375,1.40330047216537,0.128139149255701,0.511707249066704,0.321707842287215,1.48418066444991,0,0.532685175939381,0,0,0.232420756919918,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.515205058238611,0,0,0,1.30012049207304,0,0,0,0,0,0.107420244868274,0,0,0,0.165284915360978,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0.392996164052485,0,0,0,0.329294892959902,0,0,0,1.34060455107157,0,0.564862804660675,0,0,0,0,0.507447609232169,0.764637207142375,1.13929437434833,0.238231775457789,0,1.29694662238543,0,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0.561594356226918,0.228234679033192,0,0,0,0,0,0,0.687010689511529,0,0,0.333698283423817,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0.23874448473769,0,0,0,0.562677665642051,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,0,0.394573622547734,7.18449277040819,0,0,0.649376687132959,0,0,0,1.44999915086959,0,0,0,0,0,0,0.885741385813839,0.482385754501632,0,0.221158519862449,0,0.219385397153973,0,0,0.307801034015188,0.341826167541004,0,0.0897576444097721,0,0.957003479195758,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0.611030144933625,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0.30607276163049,2.21153028699708,0,0,0,0,0,0,0.284609546029793,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0.90392296312213,0,0,0.126621591911757,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,1.09524303113594,1.27746588066972,0,0,0.558564802544508,0,0.717873024576814,0.399358000997982,0,0.223171457441873,0.268733889946905,1.08089965062721,0,0,0,0,0,0,0,0.544813624446302,0,0,0.83088067605837,0,4.6428117273477,0.0607495566580247,0,0.157611414598396,0.104909176269996,0,0,0,1.42939065274673,1.32418394073086,0.25426853765475,0,0,0,0,0,0.170388021785422,0.113312091520126,0.146552233678082,0,1.16354660725395,0.52893040697076,0,0,2.24253566392159,0,1.65695622138878,0.496166021811951,0,0,0,2.1760712134779,0.7520696820681,0.306345576763462,0.655745261419609,0,0,0,1.001527445652,0,0.443716206147409,0.310482014706917,0,0,0,0,0,0,0,0.149254802886874,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0,0,0,0.155262956876259,0,0,1.04349012362347,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0.212574920101683,0.371807292777007,0,0,0,0,0,0,0.128458450192919,0,0.159633859057151,0,0.504143392443436,0.138314504928436,0,0,0,0.11796972334774,0,0,1.1441462864015,0,0,0.376051641746286,0.40341013740704,0.781514011233092,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.0634158101939068,0.546974809018219,0,0.496211178389294,0.175871244359621,0,2.14280734351315,0,2.42786241694653,0,0.443511850813194,0,0,0.271878931907327,0.0657727735628491,0,0,0.235479278551542,0.471346769748006,0,0.913158720509496,0,0,0.285906176706625,0,0,0,0,0.207216164163037,0.3414369541879,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0.196300467230486,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,1.37415926980462,0.297046400327086,0,0.169927114687817,0.845855261818682,0.709036767709349,0,0,0,0,0,0,0.430018749454354,0,0.135982980381829,0.872701380680755,0.5290268405154,0,0.462175628631418,0,0,0,0,0,0,0,0,0.227336094654718,2.41167717140561,0.829169439458779,0.310298987585686,0,0,0.193766729508018,0.806971285846153,0,0.0636471582781649,0.202117188958219,0.870866991587845,0.342233301085281,0.134704106029175,1.00411087549747,0.332660356546013,0.0814032686109745,0,0,0,0,0.122241444182866,0.813792356631477,0.665756774185513,0.201273793591026,0 | ||
|short_description=p5@IFNGR2 | |||
}} | }} |
Latest revision as of 04:17, 18 September 2015
Short description: | p5@IFNGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_IFNGR2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -234bp_to_ENST00000290219, NM_005534, uc002yrp.3, uc002yrq.3, uc010gma.2_5end |
EntrezGene: | IFNGR2 |
HGNC: | 5440 |
UniProt: | P38484A8K881 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.29e-62 | 76 |
hematopoietic system | 8.31e-59 | 98 |
blood island | 8.31e-59 | 98 |
bone element | 1.18e-56 | 82 |
hemolymphoid system | 5.92e-52 | 108 |
skeletal element | 2.17e-50 | 90 |
immune system | 2.57e-48 | 93 |
skeletal system | 5.79e-44 | 100 |
lateral plate mesoderm | 1.28e-22 | 203 |
musculoskeletal system | 7.94e-21 | 167 |
connective tissue | 1.95e-13 | 371 |
mesoderm | 6.73e-12 | 315 |
mesoderm-derived structure | 6.73e-12 | 315 |
presumptive mesoderm | 6.73e-12 | 315 |