FFCP PHASE1:Hg19::chr21:34775772..34775786,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3460 | |EntrezGene=3460 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5440 | |HGNC=5440 | ||
|TSSclassifier=strong | |||
|UniProt=B5MCZ0 | |UniProt=B5MCZ0 | ||
|association_with_transcript=0bp_to_ENST00000405436_5end | |association_with_transcript=0bp_to_ENST00000405436_5end | ||
|cluster_id=chr21:34775772..34775786,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_2_at_IFNGR2_5end | |description=CAGE_peak_2_at_IFNGR2_5end | ||
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|ontology_enrichment_celltype=CL:0000766!1.00e-30!76;CL:0002009!9.62e-29!65;CL:0002194!6.89e-28!63;CL:0000576!6.89e-28!63;CL:0000040!6.89e-28!63;CL:0000559!6.89e-28!63;CL:0002057!3.27e-27!42;CL:0000557!7.66e-26!71;CL:0000839!7.41e-24!70;CL:0000860!2.09e-23!45;CL:0000763!1.79e-18!112;CL:0000049!1.79e-18!112;CL:0000738!2.98e-12!140;CL:0002087!1.14e-09!119;CL:0002031!3.04e-08!124;CL:0002032!1.62e-07!165;CL:0000837!1.62e-07!165;CL:0000037!4.22e-07!172;CL:0000566!4.22e-07!172;CL:0002393!8.33e-07!9;CL:0002397!8.33e-07!9;CL:0000988!8.51e-07!182;CL:0002371!9.51e-07!591 | |ontology_enrichment_celltype=CL:0000766!1.00e-30!76;CL:0002009!9.62e-29!65;CL:0002194!6.89e-28!63;CL:0000576!6.89e-28!63;CL:0000040!6.89e-28!63;CL:0000559!6.89e-28!63;CL:0002057!3.27e-27!42;CL:0000557!7.66e-26!71;CL:0000839!7.41e-24!70;CL:0000860!2.09e-23!45;CL:0000763!1.79e-18!112;CL:0000049!1.79e-18!112;CL:0000738!2.98e-12!140;CL:0002087!1.14e-09!119;CL:0002031!3.04e-08!124;CL:0002032!1.62e-07!165;CL:0000837!1.62e-07!165;CL:0000037!4.22e-07!172;CL:0000566!4.22e-07!172;CL:0002393!8.33e-07!9;CL:0002397!8.33e-07!9;CL:0000988!8.51e-07!182;CL:0002371!9.51e-07!591 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.62e-23;33!CL:0002057;7.62e-23;33!CL:0000473;1.47e-22;39!CL:0000234;1.47e-22;39!CL:0000576;2.61e-19;48!CL:0000766;3.02e-16;69!CL:0000763;4.18e-07;100 | |ontology_enrichment_celltype_v019=CL:0000860;7.62e-23;33!CL:0002057;7.62e-23;33!CL:0000473;1.47e-22;39!CL:0000234;1.47e-22;39!CL:0000576;2.61e-19;48!CL:0000766;3.02e-16;69!CL:0000763;4.18e-07;100 | ||
|ontology_enrichment_celltype_v019_2=CL:0000766,9.18e-36,72;CL:0000473,4.65e-35,48;CL:0000234,4.65e-35,48;CL:0002009,1.00e-34,61;CL:0002194,9.46e-34,59;CL:0000576,9.46e-34,59;CL:0000040,9.46e-34,59;CL:0000559,9.46e-34,59;CL:0000860,5.11e-31,42;CL:0002057,5.11e-31,42;CL:0000557,1.69e-30,67;CL:0000839,1.40e-28,66;CL:0000763,6.32e-22,108;CL:0000049,6.32e-22,108;CL:0000738,4.51e-18,136;CL:0002087,7.06e-15,115;CL:0002031,8.92e-13,120;CL:0002032,1.70e-11,161;CL:0000837,1.70e-11,161;CL:0000037,2.45e-11,168;CL:0000988,9.27e-11,177;CL:0002393,1.38e-07,9;CL:0002397,1.38e-07,9;CL:0002320,2.53e-07,361;CL:0000134,2.92e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-22;42!CL:0000049;3.48e-07;108 | |ontology_enrichment_development_v019=CL:0002057;1.09e-22;42!CL:0000049;3.48e-07;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.45e-25!102;UBERON:0003061!7.45e-25!102;UBERON:0002193!1.49e-24!112;UBERON:0002371!9.82e-23!80;UBERON:0001474!5.30e-21!86;UBERON:0002405!1.51e-19!115;UBERON:0004765!2.35e-18!101;UBERON:0001434!2.35e-18!101;UBERON:0003081!2.03e-15!216;UBERON:0002204!1.23e-12!167;UBERON:0000926!2.75e-07!448;UBERON:0004120!2.75e-07!448;UBERON:0006603!2.75e-07!448;UBERON:0000480!9.27e-07!626 | |ontology_enrichment_uberon=UBERON:0002390!7.45e-25!102;UBERON:0003061!7.45e-25!102;UBERON:0002193!1.49e-24!112;UBERON:0002371!9.82e-23!80;UBERON:0001474!5.30e-21!86;UBERON:0002405!1.51e-19!115;UBERON:0004765!2.35e-18!101;UBERON:0001434!2.35e-18!101;UBERON:0003081!2.03e-15!216;UBERON:0002204!1.23e-12!167;UBERON:0000926!2.75e-07!448;UBERON:0004120!2.75e-07!448;UBERON:0006603!2.75e-07!448;UBERON:0000480!9.27e-07!626 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.21e-28,98;UBERON:0003061,1.21e-28,98;UBERON:0002193,6.77e-27,108;UBERON:0002371,2.42e-26,76;UBERON:0002405,1.42e-22,93;UBERON:0001474,1.65e-22,82;UBERON:0004765,1.54e-21,90;UBERON:0001434,6.53e-18,100;UBERON:0003081,1.41e-16,203;UBERON:0002204,5.82e-12,167;UBERON:0000926,1.29e-07,315;UBERON:0004120,1.29e-07,315;UBERON:0006603,1.29e-07,315;UBERON:0002384,1.56e-07,371 | |||
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| ||
|short_description=p2@IFNGR2 | |short_description=p2@IFNGR2 | ||
}} | }} |
Latest revision as of 04:22, 18 September 2015
Short description: | p2@IFNGR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_IFNGR2_5end |
Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
Association with transcript: | 0bp_to_ENST00000405436_5end |
EntrezGene: | IFNGR2 |
HGNC: | 5440 |
UniProt: | B5MCZ0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 9.18e-36 | 72 |
defensive cell | 4.65e-35 | 48 |
phagocyte | 4.65e-35 | 48 |
macrophage dendritic cell progenitor | 1.00e-34 | 61 |
monopoietic cell | 9.46e-34 | 59 |
monocyte | 9.46e-34 | 59 |
monoblast | 9.46e-34 | 59 |
promonocyte | 9.46e-34 | 59 |
classical monocyte | 5.11e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.11e-31 | 42 |
granulocyte monocyte progenitor cell | 1.69e-30 | 67 |
myeloid lineage restricted progenitor cell | 1.40e-28 | 66 |
myeloid cell | 6.32e-22 | 108 |
common myeloid progenitor | 6.32e-22 | 108 |
leukocyte | 4.51e-18 | 136 |
nongranular leukocyte | 7.06e-15 | 115 |
hematopoietic lineage restricted progenitor cell | 8.92e-13 | 120 |
hematopoietic oligopotent progenitor cell | 1.70e-11 | 161 |
hematopoietic multipotent progenitor cell | 1.70e-11 | 161 |
hematopoietic stem cell | 2.45e-11 | 168 |
hematopoietic cell | 9.27e-11 | 177 |
intermediate monocyte | 1.38e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.38e-07 | 9 |
connective tissue cell | 2.53e-07 | 361 |
mesenchymal cell | 2.92e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.21e-28 | 98 |
blood island | 1.21e-28 | 98 |
hemolymphoid system | 6.77e-27 | 108 |
bone marrow | 2.42e-26 | 76 |
immune system | 1.42e-22 | 93 |
bone element | 1.65e-22 | 82 |
skeletal element | 1.54e-21 | 90 |
skeletal system | 6.53e-18 | 100 |
lateral plate mesoderm | 1.41e-16 | 203 |
musculoskeletal system | 5.82e-12 | 167 |
mesoderm | 1.29e-07 | 315 |
mesoderm-derived structure | 1.29e-07 | 315 |
presumptive mesoderm | 1.29e-07 | 315 |
connective tissue | 1.56e-07 | 371 |