FFCP PHASE1:Hg19::chr8:39771339..39771352,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3620 | |EntrezGene=3620 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6059 | |HGNC=6059 | ||
|TSSclassifier=strong | |||
|UniProt=P14902 | |UniProt=P14902 | ||
|association_with_transcript=11bp_to_NM_002164,uc003xnm.2,uc003xnn.2_5end | |association_with_transcript=11bp_to_NM_002164,uc003xnm.2,uc003xnn.2_5end | ||
|cluster_id=chr8:39771339..39771352,+ | |||
|coexpression_cluster_id=C821 | |||
|description=CAGE_peak_4_at_IDO1_5end | |description=CAGE_peak_4_at_IDO1_5end | ||
|id=chr8:39771339..39771352,+ | |id=chr8:39771339..39771352,+ | ||
|ontology_enrichment_celltype=CL:0000860!9.84e-20!45;CL:0002057!4.84e-19!42;CL:0002009!1.62e-15!65;CL:0002194!3.14e-15!63;CL:0000576!3.14e-15!63;CL:0000040!3.14e-15!63;CL:0000559!3.14e-15!63;CL:0000557!2.28e-13!71;CL:0000839!9.49e-13!70;CL:0000766!5.30e-12!76;CL:0000763!1.96e-08!112;CL:0000049!1.96e-08!112 | |ontology_enrichment_celltype=CL:0000860!9.84e-20!45;CL:0002057!4.84e-19!42;CL:0002009!1.62e-15!65;CL:0002194!3.14e-15!63;CL:0000576!3.14e-15!63;CL:0000040!3.14e-15!63;CL:0000559!3.14e-15!63;CL:0000557!2.28e-13!71;CL:0000839!9.49e-13!70;CL:0000766!5.30e-12!76;CL:0000763!1.96e-08!112;CL:0000049!1.96e-08!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;9.51e-47;33!CL:0002057;9.51e-47;33!CL:0000473;9.50e-33;39!CL:0000234;9.50e-33;39!CL:0000576;4.37e-21;48!CL:0000766;4.37e-12;69!CL:0000453;8.52e-09;5!CL:0000763;5.57e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.44e-40,42;CL:0002057,4.44e-40,42;CL:0000473,2.09e-34,48;CL:0000234,2.09e-34,48;CL:0002194,1.81e-26,59;CL:0000576,1.81e-26,59;CL:0000040,1.81e-26,59;CL:0000559,1.81e-26,59;CL:0002009,1.91e-25,61;CL:0000839,3.72e-23,66;CL:0000766,5.72e-23,72;CL:0000557,9.72e-23,67;CL:0000763,1.35e-18,108;CL:0000049,1.35e-18,108;CL:0000738,1.47e-13,136;CL:0002087,3.16e-11,115;CL:0002031,1.47e-10,120;CL:0002032,1.48e-10,161;CL:0000837,1.48e-10,161;CL:0000037,7.03e-10,168;CL:0000988,4.33e-09,177;CL:0000453,8.42e-09,5 | |||
|ontology_enrichment_development_v019=CL:0002057;3.22e-28;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!2.62e-20!112;UBERON:0002390!1.87e-18!102;UBERON:0003061!1.87e-18!102;UBERON:0001474!1.15e-12!86;UBERON:0002371!1.52e-12!80;UBERON:0002405!1.83e-12!115;UBERON:0004765!6.33e-10!101;UBERON:0001434!6.33e-10!101;UBERON:0007023!7.06e-10!115;UBERON:0001737!1.01e-07!9;UBERON:0000926!1.27e-07!448;UBERON:0004120!1.27e-07!448;UBERON:0006603!1.27e-07!448;UBERON:0001557!2.58e-07!19 | |ontology_enrichment_uberon=UBERON:0002193!2.62e-20!112;UBERON:0002390!1.87e-18!102;UBERON:0003061!1.87e-18!102;UBERON:0001474!1.15e-12!86;UBERON:0002371!1.52e-12!80;UBERON:0002405!1.83e-12!115;UBERON:0004765!6.33e-10!101;UBERON:0001434!6.33e-10!101;UBERON:0007023!7.06e-10!115;UBERON:0001737!1.01e-07!9;UBERON:0000926!1.27e-07!448;UBERON:0004120!1.27e-07!448;UBERON:0006603!1.27e-07!448;UBERON:0001557!2.58e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.55e-09;15!UBERON:0000179;4.55e-09;15!UBERON:0000463;4.55e-09;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.48e-29,98;UBERON:0003061,9.48e-29,98;UBERON:0002193,1.81e-25,108;UBERON:0002371,1.79e-19,76;UBERON:0002405,2.50e-18,93;UBERON:0001474,1.08e-17,82;UBERON:0004765,1.09e-15,90;UBERON:0001434,1.24e-13,100;UBERON:0003081,1.67e-12,203;UBERON:0000178,4.99e-09,15;UBERON:0000179,4.99e-09,15;UBERON:0000463,4.99e-09,15;UBERON:0000926,1.57e-07,315;UBERON:0004120,1.57e-07,315;UBERON:0006603,1.57e-07,315;UBERON:0002204,4.15e-07,167 | |||
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| ||
|short_description=p4@IDO1 | |short_description=p4@IDO1 | ||
}} | }} |
Latest revision as of 05:14, 18 September 2015
Short description: | p4@IDO1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_IDO1_5end |
Coexpression cluster: | C821_migratory_CD14_immature_CD14CD16_Dendritic_Macrophage_Monocytederived |
Association with transcript: | 11bp_to_NM_002164, uc003xnm.2, uc003xnn.2_5end |
EntrezGene: | IDO1 |
HGNC: | 6059 |
UniProt: | P14902 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 4.44e-40 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.44e-40 | 42 |
defensive cell | 2.09e-34 | 48 |
phagocyte | 2.09e-34 | 48 |
monopoietic cell | 1.81e-26 | 59 |
monocyte | 1.81e-26 | 59 |
monoblast | 1.81e-26 | 59 |
promonocyte | 1.81e-26 | 59 |
macrophage dendritic cell progenitor | 1.91e-25 | 61 |
myeloid lineage restricted progenitor cell | 3.72e-23 | 66 |
myeloid leukocyte | 5.72e-23 | 72 |
granulocyte monocyte progenitor cell | 9.72e-23 | 67 |
myeloid cell | 1.35e-18 | 108 |
common myeloid progenitor | 1.35e-18 | 108 |
leukocyte | 1.47e-13 | 136 |
nongranular leukocyte | 3.16e-11 | 115 |
hematopoietic lineage restricted progenitor cell | 1.47e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.48e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.48e-10 | 161 |
hematopoietic stem cell | 7.03e-10 | 168 |
hematopoietic cell | 4.33e-09 | 177 |
Langerhans cell | 8.42e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 9.48e-29 | 98 |
blood island | 9.48e-29 | 98 |
hemolymphoid system | 1.81e-25 | 108 |
bone marrow | 1.79e-19 | 76 |
immune system | 2.50e-18 | 93 |
bone element | 1.08e-17 | 82 |
skeletal element | 1.09e-15 | 90 |
skeletal system | 1.24e-13 | 100 |
lateral plate mesoderm | 1.67e-12 | 203 |
blood | 4.99e-09 | 15 |
haemolymphatic fluid | 4.99e-09 | 15 |
organism substance | 4.99e-09 | 15 |
mesoderm | 1.57e-07 | 315 |
mesoderm-derived structure | 1.57e-07 | 315 |
presumptive mesoderm | 1.57e-07 | 315 |
musculoskeletal system | 4.15e-07 | 167 |