FFCP PHASE1:Hg19::chr6:33037520..33037535,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3113 | |EntrezGene=3113 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4938 | |HGNC=4938 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-495bp_to_ENST00000437811_5end | |association_with_transcript=-495bp_to_ENST00000437811_5end | ||
|cluster_id=chr6:33037520..33037535,- | |||
|coexpression_cluster_id=C187 | |||
|description=CAGE_peak_8_at_HLA-DPA1_5end | |description=CAGE_peak_8_at_HLA-DPA1_5end | ||
|id=chr6:33037520..33037535,- | |id=chr6:33037520..33037535,- | ||
|ontology_enrichment_celltype=CL:0000738!1.91e-54!140;CL:0002087!7.41e-53!119;CL:0002031!6.18e-50!124;CL:0002009!2.02e-49!65;CL:0002057!3.20e-47!42;CL:0002194!1.15e-46!63;CL:0000576!1.15e-46!63;CL:0000040!1.15e-46!63;CL:0000559!1.15e-46!63;CL:0000557!8.88e-44!71;CL:0000037!2.92e-43!172;CL:0000566!2.92e-43!172;CL:0000860!4.03e-43!45;CL:0000988!1.26e-41!182;CL:0002032!1.32e-40!165;CL:0000837!1.32e-40!165;CL:0000839!2.45e-40!70;CL:0000766!3.70e-39!76;CL:0000763!1.75e-30!112;CL:0000049!1.75e-30!112;CL:0000990!1.18e-14!8;CL:0000451!3.59e-14!10;CL:0000945!6.34e-13!24;CL:0000826!6.34e-13!24;CL:0000134!2.81e-11!358;CL:0002320!1.31e-10!365;CL:0000840!3.61e-10!5;CL:0001029!3.61e-10!5;CL:0000838!1.51e-09!52;CL:0000542!3.05e-09!53;CL:0000051!3.05e-09!53;CL:0000453!6.14e-09!5;CL:0000219!9.56e-09!390;CL:0002393!5.04e-08!9;CL:0002397!5.04e-08!9;CL:0000236!1.21e-07!14 | |ontology_enrichment_celltype=CL:0000738!1.91e-54!140;CL:0002087!7.41e-53!119;CL:0002031!6.18e-50!124;CL:0002009!2.02e-49!65;CL:0002057!3.20e-47!42;CL:0002194!1.15e-46!63;CL:0000576!1.15e-46!63;CL:0000040!1.15e-46!63;CL:0000559!1.15e-46!63;CL:0000557!8.88e-44!71;CL:0000037!2.92e-43!172;CL:0000566!2.92e-43!172;CL:0000860!4.03e-43!45;CL:0000988!1.26e-41!182;CL:0002032!1.32e-40!165;CL:0000837!1.32e-40!165;CL:0000839!2.45e-40!70;CL:0000766!3.70e-39!76;CL:0000763!1.75e-30!112;CL:0000049!1.75e-30!112;CL:0000990!1.18e-14!8;CL:0000451!3.59e-14!10;CL:0000945!6.34e-13!24;CL:0000826!6.34e-13!24;CL:0000134!2.81e-11!358;CL:0002320!1.31e-10!365;CL:0000840!3.61e-10!5;CL:0001029!3.61e-10!5;CL:0000838!1.51e-09!52;CL:0000542!3.05e-09!53;CL:0000051!3.05e-09!53;CL:0000453!6.14e-09!5;CL:0000219!9.56e-09!390;CL:0002393!5.04e-08!9;CL:0002397!5.04e-08!9;CL:0000236!1.21e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.99e-56;33!CL:0002057;4.99e-56;33!CL:0000473;3.86e-52;39!CL:0000234;3.86e-52;39!CL:0000576;6.80e-33;48!CL:0000990;7.87e-27;8!CL:0000766;5.53e-22;69!CL:0000451;8.83e-22;10!CL:0000453;2.07e-16;5!CL:0000738;3.37e-14;136!CL:0000840;5.34e-14;5!CL:0000235;3.16e-13;6!CL:0000763;1.59e-10;100!CL:0002087;1.64e-10;104!CL:0000988;1.07e-07;177!CL:0002393;1.37e-07;6!CL:0002397;1.37e-07;6!CL:0000219;7.66e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,1.48e-73,61;CL:0000473,1.72e-72,48;CL:0000234,1.72e-72,48;CL:0002194,4.75e-71,59;CL:0000576,4.75e-71,59;CL:0000040,4.75e-71,59;CL:0000559,4.75e-71,59;CL:0000557,1.83e-66,67;CL:0000839,6.28e-63,66;CL:0000860,9.14e-61,42;CL:0002057,9.14e-61,42;CL:0000766,3.32e-57,72;CL:0000738,4.26e-49,136;CL:0000763,1.06e-47,108;CL:0000049,1.06e-47,108;CL:0002087,1.46e-46,115;CL:0002031,1.41e-44,120;CL:0000037,2.24e-38,168;CL:0002032,4.00e-38,161;CL:0000837,4.00e-38,161;CL:0000988,4.71e-36,177;CL:0000990,5.75e-27,8;CL:0000451,6.86e-22,10;CL:0000453,1.74e-16,5;CL:0000134,3.15e-14,354;CL:0000840,4.71e-14,5;CL:0001029,4.71e-14,5;CL:0002320,8.43e-14,361;CL:0000235,6.56e-13,6;CL:0000219,2.70e-12,386;CL:0000048,1.89e-10,427;CL:0000723,3.40e-10,433;CL:0000034,7.25e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-41;42!CL:0000049;2.44e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.54e-40!80;UBERON:0002390!8.39e-39!102;UBERON:0003061!8.39e-39!102;UBERON:0002193!2.43e-36!112;UBERON:0001474!3.89e-36!86;UBERON:0002405!1.12e-29!115;UBERON:0004765!1.73e-29!101;UBERON:0001434!1.73e-29!101;UBERON:0003081!1.45e-13!216;UBERON:0002204!3.47e-13!167;UBERON:0002384!3.93e-10!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.73e-58,76;UBERON:0001474,3.23e-53,82;UBERON:0004765,6.17e-48,90;UBERON:0002390,1.88e-46,98;UBERON:0003061,1.88e-46,98;UBERON:0002405,3.46e-46,93;UBERON:0001434,1.65e-42,100;UBERON:0002193,1.51e-41,108;UBERON:0002204,8.47e-23,167;UBERON:0003081,2.19e-20,203;UBERON:0002384,3.22e-13,371;UBERON:0000926,1.33e-10,315;UBERON:0004120,1.33e-10,315;UBERON:0006603,1.33e-10,315 | |||
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|short_description=p8@HLA-DPA1 | |short_description=p8@HLA-DPA1 | ||
}} | }} |
Latest revision as of 05:29, 18 September 2015
Short description: | p8@HLA-DPA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HLA-DPA1_5end |
Coexpression cluster: | C187_migratory_immature_Dendritic_CD19_CD14_Monocytederived_Macrophage |
Association with transcript: | -495bp_to_ENST00000437811_5end |
EntrezGene: | HLA-DPA1 |
HGNC: | 4938 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.73e-58 | 76 |
bone element | 3.23e-53 | 82 |
skeletal element | 6.17e-48 | 90 |
hematopoietic system | 1.88e-46 | 98 |
blood island | 1.88e-46 | 98 |
immune system | 3.46e-46 | 93 |
skeletal system | 1.65e-42 | 100 |
hemolymphoid system | 1.51e-41 | 108 |
musculoskeletal system | 8.47e-23 | 167 |
lateral plate mesoderm | 2.19e-20 | 203 |
connective tissue | 3.22e-13 | 371 |
mesoderm | 1.33e-10 | 315 |
mesoderm-derived structure | 1.33e-10 | 315 |
presumptive mesoderm | 1.33e-10 | 315 |