FFCP PHASE1:Hg19::chr2:173724826..173724840,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:173724826..173724840,+ to FFCP PHASE1:Hg19::chr2:173724826..173724840,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11069 | |EntrezGene=11069 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16626 | |HGNC=16626 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z283 | |UniProt=B7Z283 | ||
|association_with_transcript=23bp_to_ENST00000540783,uc010zec.1,uc010zed.1_5end | |||
|cluster_id=chr2:173724826..173724840,+ | |||
|coexpression_cluster_id=C135 | |||
|description=CAGE_peak_15_at_RAPGEF4_5end | |||
|id=chr2:173724826..173724840,+ | |||
|ontology_enrichment_celltype=CL:0002144!4.31e-07!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010122;1.71e-09;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;9.07e-10;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,9.46e-10,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.21e-44!57;UBERON:0005068!3.21e-44!57;UBERON:0006241!3.21e-44!57;UBERON:0007135!3.21e-44!57;UBERON:0007023!1.06e-38!115;UBERON:0002616!2.04e-37!59;UBERON:0003080!4.52e-36!42;UBERON:0001017!8.41e-36!82;UBERON:0005743!2.48e-35!86;UBERON:0002780!2.74e-34!41;UBERON:0001890!2.74e-34!41;UBERON:0006240!2.74e-34!41;UBERON:0000073!9.31e-33!94;UBERON:0001016!9.31e-33!94;UBERON:0003075!4.66e-32!86;UBERON:0007284!4.66e-32!86;UBERON:0000955!6.79e-32!69;UBERON:0006238!6.79e-32!69;UBERON:0002020!2.91e-30!34;UBERON:0003528!2.91e-30!34;UBERON:0001893!3.80e-30!34;UBERON:0002346!4.28e-30!90;UBERON:0001869!6.83e-30!32;UBERON:0002791!1.90e-28!33;UBERON:0002619!3.90e-24!22;UBERON:0003056!6.67e-24!61;UBERON:0000956!9.12e-21!25;UBERON:0000203!9.12e-21!25;UBERON:0001950!2.21e-20!20;UBERON:0000025!2.58e-16!194;UBERON:0000033!1.65e-15!123;UBERON:0004111!7.02e-15!241;UBERON:0004121!9.28e-15!169;UBERON:0000153!2.63e-14!129;UBERON:0007811!2.63e-14!129;UBERON:0000924!3.88e-14!173;UBERON:0006601!3.88e-14!173;UBERON:0001871!3.63e-13!7;UBERON:0000477!7.91e-13!286;UBERON:0000200!8.36e-13!6;UBERON:0000349!6.01e-12!5;UBERON:0002420!9.82e-12!9;UBERON:0007245!9.82e-12!9;UBERON:0010009!9.82e-12!9;UBERON:0010011!9.82e-12!9;UBERON:0000454!9.82e-12!9;UBERON:0002308!4.51e-11!9;UBERON:0000125!4.51e-11!9;UBERON:0000483!1.17e-10!309;UBERON:0000119!2.08e-10!312;UBERON:0003076!2.43e-09!15;UBERON:0003057!2.43e-09!15;UBERON:0002298!8.93e-09!8;UBERON:0009663!7.53e-08!7;UBERON:0001915!4.31e-07!3;UBERON:0001982!4.31e-07!3;UBERON:0002240!4.40e-07!3;UBERON:0002771!5.54e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;5.52e-34;2!UBERON:0002757;5.52e-34;2!UBERON:0010134;5.52e-34;2!UBERON:0005408;5.52e-34;2!UBERON:0001899;5.52e-34;2!UBERON:0005383;6.80e-23;3!UBERON:0005382;6.80e-23;3!UBERON:0002780;1.99e-20;41!UBERON:0001890;1.99e-20;41!UBERON:0002791;1.86e-18;32!UBERON:0001874;5.72e-18;1!UBERON:0003296;1.51e-17;4!UBERON:0010133;1.51e-17;4!UBERON:0002784;1.51e-17;4!UBERON:0000369;1.94e-17;4!UBERON:0002435;1.94e-17;4!UBERON:0000204;1.94e-17;4!UBERON:0001869;2.67e-17;32!UBERON:0002420;3.73e-17;9!UBERON:0007245;3.73e-17;9!UBERON:0010009;3.73e-17;9!UBERON:0010011;3.73e-17;9!UBERON:0000454;3.73e-17;9!UBERON:0003528;1.09e-15;34!UBERON:0002020;1.09e-15;34!UBERON:0000349;3.72e-14;5!UBERON:0001893;1.31e-13;34!UBERON:0002619;9.76e-12;22!UBERON:0000073;1.49e-11;53!UBERON:0002616;1.49e-11;53!UBERON:0001894;1.90e-10;7!UBERON:0000956;2.03e-10;25!UBERON:0000203;2.03e-10;25!UBERON:0001871;2.19e-10;6!UBERON:0009663;2.19e-10;7!UBERON:0001876;1.17e-09;2!UBERON:0001873;1.71e-09;2!UBERON:0001954;1.71e-09;2!UBERON:0002702;1.71e-09;2!UBERON:0003022;1.71e-09;2!UBERON:0002421;1.71e-09;2!UBERON:0002600;1.71e-09;2!UBERON:0000955;1.56e-08;68!UBERON:0000125;2.80e-08;9!UBERON:0002308;2.80e-08;9!UBERON:0001950;1.18e-07;20!UBERON:0001870;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.29e-34,2;UBERON:0002757,4.29e-34,2;UBERON:0010134,4.29e-34,2;UBERON:0005408,4.29e-34,2;UBERON:0001899,4.29e-34,2;UBERON:0002780,1.76e-24,41;UBERON:0001890,1.76e-24,41;UBERON:0003080,1.76e-24,41;UBERON:0006240,1.76e-24,41;UBERON:0005383,5.76e-23,3;UBERON:0005382,5.76e-23,3;UBERON:0000073,6.06e-19,53;UBERON:0002616,6.06e-19,53;UBERON:0001874,4.44e-18,1;UBERON:0001049,6.38e-18,56;UBERON:0005068,6.38e-18,56;UBERON:0006241,6.38e-18,56;UBERON:0007135,6.38e-18,56;UBERON:0002791,1.02e-17,32;UBERON:0001869,1.02e-17,32;UBERON:0003296,1.33e-17,4;UBERON:0010133,1.33e-17,4;UBERON:0002784,1.33e-17,4;UBERON:0000369,1.71e-17,4;UBERON:0002435,1.71e-17,4;UBERON:0000204,1.71e-17,4;UBERON:0010082,1.71e-17,4;UBERON:0002420,3.53e-17,9;UBERON:0007245,3.53e-17,9;UBERON:0010009,3.53e-17,9;UBERON:0010011,3.53e-17,9;UBERON:0000454,3.53e-17,9;UBERON:0003528,1.07e-16,34;UBERON:0002020,1.07e-16,34;UBERON:0001893,1.07e-16,34;UBERON:0003056,1.95e-16,61;UBERON:0000955,1.68e-14,68;UBERON:0006238,1.68e-14,68;UBERON:0000349,4.11e-14,5;UBERON:0001016,7.47e-14,89;UBERON:0001017,3.83e-12,81;UBERON:0003075,3.83e-12,82;UBERON:0007284,3.83e-12,82;UBERON:0010371,4.87e-12,104;UBERON:0002619,1.02e-11,22;UBERON:0002346,1.47e-11,86;UBERON:0001894,1.77e-10,7;UBERON:0006222,1.77e-10,7;UBERON:0009663,2.04e-10,7;UBERON:0000956,2.11e-10,25;UBERON:0000203,2.11e-10,25;UBERON:0001871,2.46e-10,6;UBERON:0001876,1.22e-09,2;UBERON:0002702,1.44e-09,2;UBERON:0001873,1.71e-09,2;UBERON:0010122,1.71e-09,2;UBERON:0001954,1.86e-09,2;UBERON:0003022,1.86e-09,2;UBERON:0002421,1.86e-09,2;UBERON:0002600,1.86e-09,2;UBERON:0004121,1.08e-08,171;UBERON:0000924,1.08e-08,171;UBERON:0006601,1.08e-08,171;UBERON:0000125,2.65e-08,9;UBERON:0002308,2.65e-08,9;UBERON:0001950,1.20e-07,20;UBERON:0010314,2.41e-07,132;UBERON:0001870,8.62e-07,3 | |||
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| ||
|short_description=p15@RAPGEF4 | |||
}} | }} |
Latest revision as of 05:43, 18 September 2015
Short description: | p15@RAPGEF4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_RAPGEF4_5end |
Coexpression cluster: | C135_neuroblastoma_retinoblastoma_carcinoid_choriocarcinoma_testicular_acute_rectum |
Association with transcript: | 23bp_to_ENST00000540783, uc010zec.1, uc010zed.1_5end |
EntrezGene: | RAPGEF4 |
HGNC: | 16626 |
UniProt: | B7Z283 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanoma | 9.46e-10 | 2 |