FFCP PHASE1:Hg19::chr21:36421401..36421414,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:36421401..36421414,- to FFCP PHASE1:Hg19::chr21:36421401..36421414,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=861 | |EntrezGene=861 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10471 | |HGNC=10471 | ||
|TSSclassifier=strong | |||
|UniProt=C9JFJ4,F5H139 | |UniProt=C9JFJ4,F5H139 | ||
|association_with_transcript=47bp_to_ENST00000431176,ENST00000486278,uc010gmu.2_5end | |||
|cluster_id=chr21:36421401..36421414,- | |||
|description=CAGE_peak_16_at_RUNX1_5end | |||
|id=chr21:36421401..36421414,- | |||
|ontology_enrichment_celltype=CL:0000037!7.10e-43!172;CL:0000566!7.10e-43!172;CL:0000988!3.89e-40!182;CL:0002032!9.88e-39!165;CL:0000837!9.88e-39!165;CL:0000738!2.68e-34!140;CL:0002087!2.99e-30!119;CL:0002031!6.31e-30!124;CL:0000763!1.24e-25!112;CL:0000049!1.24e-25!112;CL:0000766!7.17e-22!76;CL:0002057!6.60e-21!42;CL:0000839!1.53e-19!70;CL:0000557!1.60e-18!71;CL:0000860!3.29e-18!45;CL:0002194!6.87e-17!63;CL:0000576!6.87e-17!63;CL:0000040!6.87e-17!63;CL:0000559!6.87e-17!63;CL:0002009!1.04e-15!65;CL:0000542!1.01e-11!53;CL:0000051!1.01e-11!53;CL:0000084!1.55e-11!25;CL:0000827!1.55e-11!25;CL:0000838!1.73e-11!52;CL:0000791!4.82e-11!18;CL:0000789!4.82e-11!18;CL:0002420!4.82e-11!18;CL:0002419!4.82e-11!18;CL:0000790!4.82e-11!18;CL:0002320!1.27e-10!365;CL:0000134!1.44e-10!358;CL:0000625!3.07e-08!11;CL:0000219!7.82e-08!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.40e-21;33!CL:0002057;4.40e-21;33!CL:0000576;7.00e-16;48!CL:0000473;4.92e-15;39!CL:0000234;4.92e-15;39!CL:0000791;2.13e-14;18!CL:0000789;2.13e-14;18!CL:0002419;2.13e-14;18!CL:0000766;2.84e-13;69!CL:0000625;4.34e-13;11!CL:0002087;4.70e-12;104!CL:0000084;8.10e-11;25!CL:0000763;4.17e-10;100!CL:0000988;3.81e-09;177!CL:0000738;1.00e-07;136!CL:0000094;1.07e-07;8!CL:0000623;7.19e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.55e-44,168;CL:0000988,7.20e-41,177;CL:0000738,2.39e-40,136;CL:0002032,1.82e-38,161;CL:0000837,1.82e-38,161;CL:0002087,3.59e-32,115;CL:0002031,2.07e-30,120;CL:0000766,2.72e-26,72;CL:0000763,7.49e-26,108;CL:0000049,7.49e-26,108;CL:0000860,1.88e-24,42;CL:0002057,1.88e-24,42;CL:0000557,2.34e-20,67;CL:0000473,2.81e-20,48;CL:0000234,2.81e-20,48;CL:0000839,1.70e-19,66;CL:0002194,3.64e-18,59;CL:0000576,3.64e-18,59;CL:0000040,3.64e-18,59;CL:0000559,3.64e-18,59;CL:0002009,2.82e-17,61;CL:0000791,5.59e-15,18;CL:0000789,5.59e-15,18;CL:0002420,5.59e-15,18;CL:0002419,5.59e-15,18;CL:0000790,5.59e-15,18;CL:0000625,1.41e-13,11;CL:0000134,6.12e-13,354;CL:0002320,2.90e-12,361;CL:0000838,1.02e-11,52;CL:0000542,2.27e-11,53;CL:0000051,2.27e-11,53;CL:0000084,4.19e-11,25;CL:0000827,4.19e-11,25;CL:0000219,7.28e-11,386;CL:0000034,5.55e-10,441;CL:0000048,5.71e-10,427;CL:0000723,1.60e-09,433;CL:0000094,4.97e-08,8;CL:0000623,7.93e-07,3;CL:0000825,7.93e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;8.61e-19;42!CL:0000790;2.13e-14;18!CL:0000049;2.95e-08;108 | |||
|ontology_enrichment_disease=DOID:2531!1.50e-09!51;DOID:0060083!1.50e-09!51;DOID:1240!5.17e-09!39;DOID:8692!6.57e-08!31 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.96e-23!102;UBERON:0003061!6.96e-23!102;UBERON:0002193!5.66e-20!112;UBERON:0002371!8.79e-19!80;UBERON:0001474!3.95e-16!86;UBERON:0004765!2.11e-15!101;UBERON:0001434!2.11e-15!101;UBERON:0002384!9.12e-11!375;UBERON:0002405!1.37e-10!115;UBERON:0002204!3.60e-08!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.67e-21,98;UBERON:0003061,3.67e-21,98;UBERON:0002371,4.75e-19,76;UBERON:0002193,5.34e-18,108;UBERON:0001474,7.09e-17,82;UBERON:0002405,1.02e-14,93;UBERON:0004765,1.89e-14,90;UBERON:0002384,1.34e-12,371;UBERON:0001434,5.39e-12,100;UBERON:0002204,6.22e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,1.09499540058307,0,0.0764134057479513,0,0,3.93364276848904,1.91914699048606,2.32224184974114,0,0,0,0.542270404062111,0.142169232487422,1.46800219667424,7.20194031091441,5.21415563422368,3.47217393145363,0,0.647787332037959,0,1.74477886535478,1.51150377475524,1.94067248950253,1.85943229524548,2.05583944010913,0.619412741790207,3.74000110018796,3.58624989140741,1.18241114944293,1.72372840368309,2.5819387343353,1.35426486594342,2.25890807451126,0.818718450173537,1.34834090667051,3.67300670845083,0.641858054152187,1.27867425159808,1.31940520074686,3.98927315243264,3.83602275479425,1.16083695451434,0.56738522469114,0.622822248995575,6.53246529667532,2.08593167368081,2.6062661364614,1.81619850790011,0,0.632924774881769,0.211255286311942,0.425208599930087,1.04829322754188,0.786300418025466,1.50176892841506,0.32145117339416,0.570025487482497,0.39783335439818,0.730656615058536,0,1.09227722252426,0,1.28019066769952,0,0,0.661044872784862,0.954053754535364,3.98449078376614,1.76171156811282,1.91136614062614,2.64342657158052,1.68152568894461,0.263384084775077,1.37696839079683,2.35806457649499,1.85041349099558,1.00311897234407,0.977766799900771,0.946895611469467,0,0.668462741311041,1.47302953737419,0.664601683750863,0.541607727530031,1.28091319725675,2.08094956095805,1.47994114143309,1.93445012450094,1.44901542867526,1.03800594213442,0.802622484269139,1.04535523804977,1.13309342697566,0.766440987203842,1.03088233644789,0.506039384039006,0.95569624297229,1.95325036156926,1.90090408889675,1.20460095262218,1.66382594500744,1.24930726552346,2.8413270245282,2.46338399076314,1.61285394579786,2.40696176205157,2.17236605824198,0,0,0,0,0,0,0,0,0.0945348171640679,0.221729397462564,0.087834785693126,0.392937226493138,0,0,0.97364218096405,0.348259474598534,0.26591592103773,0,0.571994910780128,1.85728750664782,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,3.47880366186723,0,0.529636723252875,0,0,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0.280901613404497,0.408308342509787,0.491337269247072,0.103325781175765,0,0.247266929278557,0,0.718618141816238,0.505008341862199,0,0,0.877955241761676,0.919463387397059,0,0,0,0.427114777637135,0,0,0.103052529238439,1.54584324027377,0,0.506328996723799,0.0974370051611986,1.7670364197088,0.276149695926898,0,1.42003837006646,0.806016785821122,0.339121184620975,0.193260853163297,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0.220587945464788,0,0,0.269662616320329,0,0,0,0,0,0,0,0,0,3.09024169590255,0,0,0.548751427043128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.702012795417713,0.297262324577456,0.93733833986777,0.16798212819886,0.425325291727159,0.0895585227028483,0,0,2.46331618947972,3.60998579454227,0.414656231081544,0.864719720501769,1.64115163454294,0,0,0,0,0,0,0,0,0,0,0.646358578788889,0,0,0,0,0,0,0.266422179016099,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,4.27910715122155,0.723906533337896,1.2328579353023,1.79060963239896,0.112085143993527,3.34952292343276,4.9594342217689,4.36366323351144,0,0,0,0,0,2.99602809578873,0,2.48649308061621,0,0,0.271265023699736,0.415941723061614,0.178428988797162,0,0.117141414992713,0.902838299183157,2.27407504055985,0,0,0,0.173767228936166,0,0.343143423810856,1.44737618286021,2.15714200818617,1.38745825144478,0,0,0,0.248107807818777,0.153461973288062,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0.219259876645935,0.522870902049801,0,0,0,0.103041011647722,0.0915694648183434,0,0,0.650060246036521,0,1.83674364755032,0.462145851343933,0.614014698904518,1.92971201478343,0,0.580066775656914,0.596586391912706,1.24644849905432,0,0,0.382838137483752,0,0,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0.190630193923825,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0.0941438007767792,0,0,0,0,1.52234282769651,0,2.84823593587081,2.62054953003568,1.23408681925858,0.648473311192717,0.540031437238115,0,0,0,0.245040215981032,0.557409525377156,0.432807638929335,0.924843963529383,0.797131363644112,2.3949524571938,0.766021480529467,1.2700414963433,0.973865820823666,1.68478306868075,0.684704037099577,0.626719583092093,0,0.169291777801603,0.802940375518498,1.00899853595524,0.851692475380653,2.06103206853459,1.53620382154229,1.11838053946208,1.00109485027145,1.36771666781428,1.67043704337145,1.23087398947712,0.811367035427949,4.66300755196948,0,0,0.146508179271894,0,0.445773537109913,0,0,0,0,0,0.140669416410513,0.222617410045812,0.16480387422676,0,0.19924798825107,0.828851746593443,0,0.613612095012929,0.123084805461069,0.311039587661807,1.52776196950456,0,2.55786185113436,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0,0,0,1.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| ||
|short_description=p16@RUNX1 | |||
}} | }} |
Latest revision as of 07:04, 18 September 2015
Short description: | p16@RUNX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_RUNX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 47bp_to_ENST00000431176, ENST00000486278, uc010gmu.2_5end |
EntrezGene: | RUNX1 |
HGNC: | 10471 |
UniProt: | C9JFJ4F5H139 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.67e-21 | 98 |
blood island | 3.67e-21 | 98 |
bone marrow | 4.75e-19 | 76 |
hemolymphoid system | 5.34e-18 | 108 |
bone element | 7.09e-17 | 82 |
immune system | 1.02e-14 | 93 |
skeletal element | 1.89e-14 | 90 |
connective tissue | 1.34e-12 | 371 |
skeletal system | 5.39e-12 | 100 |
musculoskeletal system | 6.22e-07 | 167 |