FFCP PHASE1:Hg19::chr5:58571894..58571922,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5144 | |EntrezGene=5144 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8783 | |HGNC=8783 | ||
|TSSclassifier=strong | |||
|UniProt=Q08499 | |UniProt=Q08499 | ||
|association_with_transcript=22bp_to_ENST00000503258,NM_001197220,uc003jrv.2_5end | |association_with_transcript=22bp_to_ENST00000503258,NM_001197220,uc003jrv.2_5end | ||
|cluster_id=chr5:58571894..58571922,- | |||
|description=CAGE_peak_12_at_PDE4D_5end | |description=CAGE_peak_12_at_PDE4D_5end | ||
|id=chr5:58571894..58571922,- | |id=chr5:58571894..58571922,- | ||
|ontology_enrichment_celltype=CL:0002139!2.77e-08!24;CL:0000115!6.99e-07!35;CL:0000071!9.84e-07!18;CL:0002546!9.84e-07!18 | |ontology_enrichment_celltype=CL:0002139!2.77e-08!24;CL:0000115!6.99e-07!35;CL:0000071!9.84e-07!18;CL:0002546!9.84e-07!18 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.42e-07,36 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.42e-07;29 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.11e-36!115;UBERON:0001049!8.31e-19!57;UBERON:0005068!8.31e-19!57;UBERON:0006241!8.31e-19!57;UBERON:0007135!8.31e-19!57;UBERON:0002616!6.72e-17!59;UBERON:0002780!1.01e-16!41;UBERON:0001890!1.01e-16!41;UBERON:0006240!1.01e-16!41;UBERON:0003080!5.12e-16!42;UBERON:0001893!5.37e-16!34;UBERON:0002020!8.82e-16!34;UBERON:0003528!8.82e-16!34;UBERON:0001869!1.49e-15!32;UBERON:0002791!2.43e-15!33;UBERON:0000477!1.21e-14!286;UBERON:0001017!2.77e-14!82;UBERON:0000955!7.40e-14!69;UBERON:0006238!7.40e-14!69;UBERON:0002619!8.99e-14!22;UBERON:0005743!1.03e-13!86;UBERON:0003075!1.34e-13!86;UBERON:0007284!1.34e-13!86;UBERON:0001950!7.70e-13!20;UBERON:0004111!1.72e-12!241;UBERON:0000956!2.09e-12!25;UBERON:0000203!2.09e-12!25;UBERON:0002346!3.34e-12!90;UBERON:0000073!3.24e-11!94;UBERON:0001016!3.24e-11!94;UBERON:0000025!1.10e-09!194;UBERON:0000064!1.94e-09!219;UBERON:0003056!2.28e-09!61;UBERON:0000481!1.56e-08!347;UBERON:0000059!1.02e-07!11;UBERON:0000922!1.05e-07!612;UBERON:0000467!2.34e-07!625;UBERON:0000062!2.50e-07!511;UBERON:0000480!2.95e-07!626;UBERON:0000468!3.79e-07!659;UBERON:0004921!5.17e-07!129;UBERON:0004185!5.17e-07!129;UBERON:0000153!7.41e-07!129;UBERON:0007811!7.41e-07!129;UBERON:0002050!7.85e-07!605;UBERON:0005423!7.85e-07!605;UBERON:0001986!9.84e-07!18;UBERON:0004638!9.84e-07!18;UBERON:0004852!9.84e-07!18 | |ontology_enrichment_uberon=UBERON:0007023!7.11e-36!115;UBERON:0001049!8.31e-19!57;UBERON:0005068!8.31e-19!57;UBERON:0006241!8.31e-19!57;UBERON:0007135!8.31e-19!57;UBERON:0002616!6.72e-17!59;UBERON:0002780!1.01e-16!41;UBERON:0001890!1.01e-16!41;UBERON:0006240!1.01e-16!41;UBERON:0003080!5.12e-16!42;UBERON:0001893!5.37e-16!34;UBERON:0002020!8.82e-16!34;UBERON:0003528!8.82e-16!34;UBERON:0001869!1.49e-15!32;UBERON:0002791!2.43e-15!33;UBERON:0000477!1.21e-14!286;UBERON:0001017!2.77e-14!82;UBERON:0000955!7.40e-14!69;UBERON:0006238!7.40e-14!69;UBERON:0002619!8.99e-14!22;UBERON:0005743!1.03e-13!86;UBERON:0003075!1.34e-13!86;UBERON:0007284!1.34e-13!86;UBERON:0001950!7.70e-13!20;UBERON:0004111!1.72e-12!241;UBERON:0000956!2.09e-12!25;UBERON:0000203!2.09e-12!25;UBERON:0002346!3.34e-12!90;UBERON:0000073!3.24e-11!94;UBERON:0001016!3.24e-11!94;UBERON:0000025!1.10e-09!194;UBERON:0000064!1.94e-09!219;UBERON:0003056!2.28e-09!61;UBERON:0000481!1.56e-08!347;UBERON:0000059!1.02e-07!11;UBERON:0000922!1.05e-07!612;UBERON:0000467!2.34e-07!625;UBERON:0000062!2.50e-07!511;UBERON:0000480!2.95e-07!626;UBERON:0000468!3.79e-07!659;UBERON:0004921!5.17e-07!129;UBERON:0004185!5.17e-07!129;UBERON:0000153!7.41e-07!129;UBERON:0007811!7.41e-07!129;UBERON:0002050!7.85e-07!605;UBERON:0005423!7.85e-07!605;UBERON:0001986!9.84e-07!18;UBERON:0004638!9.84e-07!18;UBERON:0004852!9.84e-07!18 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.12e-12;22!UBERON:0001950;3.31e-12;20!UBERON:0000956;2.70e-10;25!UBERON:0000203;2.70e-10;25!UBERON:0001869;2.56e-09;32!UBERON:0000200;7.65e-09;6!UBERON:0001893;2.42e-08;34!UBERON:0002791;4.51e-08;32!UBERON:0007023;7.54e-08;114!UBERON:0003528;8.53e-08;34!UBERON:0002020;8.53e-08;34!UBERON:0005409;1.76e-07;22!UBERON:0001737;3.86e-07;9!UBERON:0001557;3.86e-07;9!UBERON:0000160;4.15e-07;17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.92e-29,114;UBERON:0002619,1.81e-12,22;UBERON:0001950,2.02e-12,20;UBERON:0011216,1.50e-11,223;UBERON:0001869,9.86e-11,32;UBERON:0000956,1.70e-10,25;UBERON:0000203,1.70e-10,25;UBERON:0001893,8.17e-10,34;UBERON:0001049,1.79e-09,56;UBERON:0005068,1.79e-09,56;UBERON:0006241,1.79e-09,56;UBERON:0007135,1.79e-09,56;UBERON:0002791,1.85e-09,32;UBERON:0002780,2.31e-09,41;UBERON:0001890,2.31e-09,41;UBERON:0003080,2.31e-09,41;UBERON:0006240,2.31e-09,41;UBERON:0000200,5.35e-09,6;UBERON:0003528,1.22e-08,34;UBERON:0002020,1.22e-08,34;UBERON:0004111,1.30e-08,240;UBERON:0000073,1.47e-08,53;UBERON:0002616,1.47e-08,53;UBERON:0004921,5.83e-08,118;UBERON:0005409,1.69e-07,25;UBERON:0000025,3.46e-07,192;UBERON:0000160,3.47e-07,17;UBERON:0001737,3.82e-07,9;UBERON:0003075,5.27e-07,82;UBERON:0007284,5.27e-07,82;UBERON:0001017,9.49e-07,81;UBERON:0001007,9.72e-07,145;UBERON:0001555,9.72e-07,145;UBERON:0007026,9.72e-07,145 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0,0,0,0,0,0,0,0,0,0,0.85870796139317,0,0,0,0,0,0.786728553697808,0,0.464448369948228,0,0,0,0,0.142169232487422,0.880801318004542,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2529523714611,0,0.724232594804119,0,3.89307896242109,0,0.221729397462564,0,2.0956652079634,0,0,0,0,0,0,0,0,0.596287222100115,0,2.42998351125316,0,1.67799774483962,1.37559020970034,0.208994966536811,1.03366703667732,1.06729878806013,2.34304428935269,2.41697590265488,0.760272105718513,0.488124115096339,4.04429388380456,1.62028389576352,4.37568668591991,2.2452937262617,2.59006405111641,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0.269421344139376,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243947412259191,0,0,0.310983165046111,0.252320850875628,0,0,0,0,0,0,1.0647612003586,1.34867752062481,1.68707720918437,1.98529150918309,1.30727666455444,1.42362371466658,1.21348177344148,0.784885860501384,1.53898862778556,3.69077727312324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.821860859650752,0.866198686566443,0,0.570762456703795,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0.317489471460845,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0.167516265334349,0,0,0,0,0,0.500170521059677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0.34444334449382,1.45672934405374,1.18011973463482,0,0,0,0,0,1.13733384070897,2.55140557914773,1.0795795805107,3.08454505380579,0,0,0,0,0,0,0,0,0,0,2.7821073144885,0.640986253728404,0.742585499285292,0,0,0,0,0.154048617114644,0,0,0,0,0,0.267096106940212,0.165284915360978,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,1.2655176988749,0.190630193923825,0,0,0,0,0.179872457583315,0.274537029736055,0.235624804691373,0,0,0,0,0,0,1.9109987597118,0.141405431953713,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0.633322905892992,0,0,0,0,0,0,1.7887322147588,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0.766021480529467,5.50351315082095,0,1.12318871245384,0,0,7.51903431270201,0,0,0,0,0,0,0,0,0,0,1.23087398947712,0.270455678475983,0,1.4098700508785,4.49137296979728,1.17206543417515,0.242721043499027,0,0,2.86493381685228,0.593929361665277,2.15012491469462,0.994147647766298,0.281338832821026,0,0,0,0.597743964753209,3.86797481743607,0,0.102268682502155,0,0,0.0898683511473268,7.69791051105119,0,11.837208676432,0,0,0,1.66982576691332,0,0,0,0,0.568967241427498,0,0.236387681767936,0,2.91604613383254,5.38237484293206,0.885741385813839,0.844175070377856,3.05163472634166,1.21637185924347,0,3.29078095730959,1.85195387982283,0,12.3120413606075,0,0.23056390438806,0,0,0.638002319463839,0,0,0,0,0.831058409500782,0,0,0,0,0.158936578980379,0,0.163232808159148,0.141353071433941,8.00637967045737,2.98578579323551,7.60735054728717,4.27721101453538,0,0,0,0.606610196826093,3.21031058919516,0,0,0,0,8.68085686268659,3.62972148145992,0.61214552326098,1.64285107034069,4.66002600184927,1.65901106235595,0,0,0,0,0,0,0,0,0,1.22308667769421,0,1.9351266257817,2.55812609801649,1.72442459811739,3.58859361007152,0,2.48578814858586,0,0,2.9756074099263,4.49768180290047,0,10.6726497369676,0.19980960958213,0,2.97795150031381,0,1.00838358591705,0,1.17847017308398,0,0,0.305994652908965,0,1.80126086612937,0.547621515567972,1.27746588066972,0,0,9.21631924198439,2.29160424011684,2.15361907373044,0.998395002494955,1.71690419254628,0.446342914883745,2.21705459206197,0,0,0,0,0,0.590564889088493,0,1.59045937961861,0.817220436669454,0,0,0,0,0,3.21972650287531,0,2.83700546277113,5.82245928298479,0,4.48218348332112,0,2.85878130549347,0,0,1.08599920350743,0,0,0,0,0,1.47305718976163,0.439656701034247,0,0.775697738169303,0.79339561045614,2.22412889249628,0,2.13574825135389,13.2051616283719,2.48543433208317,0.496166021811951,0,0.487170393523584,0.638341257770182,0,0,0,0,0,3.54427271986794,2.92863035764712,5.75878281249899,3.44045517414043,0.887432412294818,0.807253238237985,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,4.70078682915885,0,0,0,0.327609848846413,0,0,0,0,1.72214979660816,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47727217721857,0,2.07524016774297,1.8460472781668,0.504143392443436,1.45230230174858,2.26065903884592,0,0.785181748008205,0.235939446695481,0,0.115525666150338,0,0,9.74689488369746,1.42899623863589,0.20170506870352,1.56302802246618,0,0,0,2.4988906308806,4.68646859168308,6.40729069153671,2.91712726891971,0.546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| ||
|short_description=p12@PDE4D | |short_description=p12@PDE4D | ||
}} | }} |
Latest revision as of 07:35, 18 September 2015
Short description: | p12@PDE4D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PDE4D_5end |
Coexpression cluster: | NA |
Association with transcript: | 22bp_to_ENST00000503258, NM_001197220, uc003jrv.2_5end |
EntrezGene: | PDE4D |
HGNC: | 8783 |
UniProt: | Q08499 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.42e-07 | 36 |
Ontology term | p-value | n |
---|---|---|
adult organism | 2.92e-29 | 114 |
regional part of cerebral cortex | 1.81e-12 | 22 |
neocortex | 2.02e-12 | 20 |
organ system subdivision | 1.50e-11 | 223 |
cerebral hemisphere | 9.86e-11 | 32 |
cerebral cortex | 1.70e-10 | 25 |
pallium | 1.70e-10 | 25 |
telencephalon | 8.17e-10 | 34 |
neural tube | 1.79e-09 | 56 |
neural rod | 1.79e-09 | 56 |
future spinal cord | 1.79e-09 | 56 |
neural keel | 1.79e-09 | 56 |
regional part of telencephalon | 1.85e-09 | 32 |
regional part of forebrain | 2.31e-09 | 41 |
forebrain | 2.31e-09 | 41 |
anterior neural tube | 2.31e-09 | 41 |
future forebrain | 2.31e-09 | 41 |
gyrus | 5.35e-09 | 6 |
brain grey matter | 1.22e-08 | 34 |
gray matter | 1.22e-08 | 34 |
anatomical conduit | 1.30e-08 | 240 |
regional part of nervous system | 1.47e-08 | 53 |
regional part of brain | 1.47e-08 | 53 |
subdivision of digestive tract | 5.83e-08 | 118 |
gastrointestinal system | 1.69e-07 | 25 |
tube | 3.46e-07 | 192 |
intestine | 3.47e-07 | 17 |
larynx | 3.82e-07 | 9 |
neural plate | 5.27e-07 | 82 |
presumptive neural plate | 5.27e-07 | 82 |
central nervous system | 9.49e-07 | 81 |
digestive system | 9.72e-07 | 145 |
digestive tract | 9.72e-07 | 145 |
primitive gut | 9.72e-07 | 145 |