FFCP PHASE1:Hg19::chr21:38071488..38071502,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6493 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10883 | |||
|TSSclassifier=strong | |||
|UniProt=Q14190 | |||
|association_with_transcript=54bp_to_ENST00000290399,ENST00000481185_5end | |||
|cluster_id=chr21:38071488..38071502,+ | |||
|coexpression_cluster_id=C2630 | |||
|description=CAGE_peak_4_at_SIM2_5end | |||
|id=chr21:38071488..38071502,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.83e-17!254 | |||
|ontology_enrichment_celltype_v019=CL:0002539;1.60e-11;10!CL:1000449;1.68e-07;15!CL:0000359;2.75e-07;32 | |||
|ontology_enrichment_celltype_v019_2=CL:0002539,1.59e-11,10;CL:1000449,1.39e-07,15;CL:0000359,2.08e-07,32;CL:1000507,9.63e-07,10;CL:1000494,9.63e-07,10 | |||
|ontology_enrichment_development_v019=UBERON:0005425;3.32e-08;1 | |||
|ontology_enrichment_disease=DOID:0050687!4.59e-33!143;DOID:305!6.91e-30!106;DOID:162!2.87e-27!235;DOID:14566!4.36e-26!239;DOID:299!5.59e-12!25;DOID:1749!5.69e-07!14 | |||
|ontology_enrichment_disease_v019=DOID:3371;9.77e-09;1!DOID:4549;9.77e-09;1!DOID:5861;9.77e-09;1!DOID:6496;9.77e-09;1!DOID:0060085;3.32e-08;1!DOID:3165;3.32e-08;1!DOID:0060121;3.32e-08;1!DOID:3111;3.32e-08;1!DOID:2438;3.32e-08;1!DOID:4418;3.32e-08;1!DOID:3603;3.32e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,9.79e-09,1;DOID:4549,9.79e-09,1;DOID:5861,9.79e-09,1;DOID:6496,9.79e-09,1;DOID:3111,1.88e-08,1;DOID:3603,1.88e-08,1;DOID:0060085,2.89e-08,1;DOID:3165,2.89e-08,1;DOID:0060121,2.89e-08,1;DOID:2438,2.89e-08,1;DOID:4418,2.89e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0003104!6.24e-09!238;UBERON:0009142!6.24e-09!238;UBERON:0006554!2.04e-08!44;UBERON:0001008!4.26e-08!45;UBERON:0002113!1.44e-07!27;UBERON:0003918!1.44e-07!27;UBERON:0005095!1.44e-07!27;UBERON:0007687!1.44e-07!27;UBERON:0003064!6.97e-07!37;UBERON:0000489!7.95e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0004237;1.60e-11;10!UBERON:0004695;1.60e-11;10!UBERON:0002111;1.60e-11;10!UBERON:0004178;1.60e-11;10!UBERON:0004573;2.55e-08;33!UBERON:0004571;2.55e-08;33!UBERON:0000941;3.32e-08;1!UBERON:0001389;3.32e-08;1!UBERON:0000026;3.32e-08;1!UBERON:0008784;3.32e-08;1!UBERON:0001785;3.32e-08;1!UBERON:0002464;3.32e-08;1!UBERON:0004904;3.32e-08;1!UBERON:0006058;3.32e-08;1!UBERON:0003663;3.32e-08;1!UBERON:0004256;3.32e-08;1!UBERON:0001021;3.32e-08;1!UBERON:0004708;3.32e-08;1!UBERON:0002101;3.32e-08;1!UBERON:0004709;3.32e-08;1!UBERON:0002529;3.32e-08;1!UBERON:0010538;3.32e-08;1!UBERON:0003661;3.32e-08;1!UBERON:0010890;3.32e-08;1!UBERON:0002471;3.32e-08;1!UBERON:0001383;3.32e-08;1!UBERON:0010758;3.32e-08;1!UBERON:0010707;3.32e-08;1!UBERON:0000978;3.32e-08;1!UBERON:0002103;3.32e-08;1!UBERON:0001665;3.32e-08;1!UBERON:0003823;3.32e-08;1!UBERON:0000154;3.32e-08;1!UBERON:0010709;3.32e-08;1!UBERON:0000947;3.39e-08;21!UBERON:0010191;3.39e-08;21!UBERON:0001135;1.02e-07;15!UBERON:0006555;1.68e-07;15!UBERON:0004819;1.68e-07;15!UBERON:0001285;1.68e-07;15!UBERON:0007684;1.68e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004237,1.59e-11,10;UBERON:0004695,1.59e-11,10;UBERON:0002111,1.59e-11,10;UBERON:0004178,1.59e-11,10;UBERON:0004573,1.43e-09,33;UBERON:0004571,1.43e-09,33;UBERON:0005418,1.75e-08,1;UBERON:0001389,1.75e-08,1;UBERON:0000026,1.75e-08,1;UBERON:0008784,1.75e-08,1;UBERON:0006058,1.75e-08,1;UBERON:0003663,1.75e-08,1;UBERON:0004256,1.75e-08,1;UBERON:0004708,1.75e-08,1;UBERON:0002101,1.75e-08,1;UBERON:0004709,1.75e-08,1;UBERON:0002529,1.75e-08,1;UBERON:0010538,1.75e-08,1;UBERON:0003661,1.75e-08,1;UBERON:0010890,1.75e-08,1;UBERON:0002471,1.75e-08,1;UBERON:0001383,1.75e-08,1;UBERON:0004357,1.75e-08,1;UBERON:0004347,1.75e-08,1;UBERON:0005420,1.75e-08,1;UBERON:0005732,1.75e-08,1;UBERON:0010758,1.75e-08,1;UBERON:0010707,1.75e-08,1;UBERON:0000978,1.75e-08,1;UBERON:0002103,1.75e-08,1;UBERON:0001665,1.75e-08,1;UBERON:0003823,1.75e-08,1;UBERON:0000154,1.75e-08,1;UBERON:0010709,1.75e-08,1;UBERON:0005733,1.75e-08,1;UBERON:0005730,1.75e-08,1;UBERON:0000941,2.69e-08,1;UBERON:0001785,2.69e-08,1;UBERON:0002464,2.69e-08,1;UBERON:0004904,2.69e-08,1;UBERON:0001021,2.69e-08,1;UBERON:0003902,2.69e-08,1;UBERON:0005425,2.69e-08,1;UBERON:0000947,3.53e-08,21;UBERON:0010191,3.53e-08,21;UBERON:0001135,1.01e-07,15;UBERON:0003914,1.37e-07,117;UBERON:0004211,1.39e-07,15;UBERON:0009773,1.39e-07,15;UBERON:0001231,1.39e-07,15;UBERON:0001285,1.39e-07,15;UBERON:0007684,1.39e-07,15;UBERON:0004208,1.39e-07,15;UBERON:0001637,2.44e-07,42;UBERON:0003509,2.44e-07,42;UBERON:0004572,2.44e-07,42;UBERON:0006555,4.09e-07,16;UBERON:0004819,4.09e-07,16;UBERON:0004810,9.63e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,2.6893005858071,0.602694528023977,3.65155045193687,1.95173119516203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,1.2663051166458,0,0,0,0,3.20246987189115,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194874010322397,0,0,0,0,0,0,0,0,0.860413786167011,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0.55146986366197,0.871517776369625,0,0.674156540800822,0.784885860501384,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0.370353780634118,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.40101294060657,0.368323955743585,0,0,0,1.35359883872224,0.231046011313244,0.784349769176855,1.46139224653261,0.527758144464379,0,0,0,1.54227252690289,0,0,1.27438136522519,0,0.671624264166535,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0,0,0,0,0,0.0852266274161009,0.178064071293475,0.165284915360978,0,0,0,0,0,0,0,1.06461206063404,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,1.2130948894399,0,0,0,2.19342140668156,0,0,0,0,0,0,0,0,0,0,0,0.563391205064483,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0.324621940274555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30998378285754,0,0,0,0,0,0,0,0,0,0,0,0.211125408127993,0.19924798825107,0,0,0.613612095012929,0,0,0.0898683511473268,0.179021174675609,0,0,0,0,0,0,0,0.520855522170466,0,0,0.455173793141999,0,0.236387681767936,0,0,0.173624994933292,0,0.120596438625408,0,0,0,0,0.21787692703798,0.139423744278603,0.0769502585037971,0.455768223388005,0,0.538545866458633,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,0.150323419414493,0.933193722575224,0.664653872707185,0.330991955875499,0.313932918407225,0,0.569219092059585,0,0.347119476670262,0.489961987071888,0.69647365264322,0.17472666824203,0.343972064943233,0.387025325156341,0.584714536689484,0.656923656425674,0.387956065953678,6.17792886840502,0,0.137041924646751,1.39100228192093,0,0.391102765469606,0.320635281006135,0,1.19885765749278,0.288180834308212,0,0.686379991447858,0,0.621262677827163,0,0,0,0.101998217636322,0.577901179803038,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,1.16495949527454,0,0,0,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0.236417121897595,0.629455057619977,0,0.179287339332845,0.575745591958336,0,0,0.25426853765475,0,0,0,1.19730191562487,0,0,0.226624183040251,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124980407962107,0,0.285465333544967,0.470531639396343,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0.443565449968902,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0.800055529326307,0,0,0,0,0.214441591374926,0.782982875895635,0.906823702049089,0,0.734210113519403,1.25362188757041,0.617602894321944,1.53498834705095,0,0,0.168942440653073,0,0.345430341731199,0.607719912354764,0,0,0,0,1.31043939538565,0.491545817507439,1.69049698686902,0,0,0,0,0,0,0,0,0.107824811396682,0,0,0.33946505990805,0.425149840203366,0,0,0,0,0,0.705351887381368,0,0,0,0.159633859057151,0,0,0,0,1.42769420259154,0.0981477185010256,0,0,0.346576998451015,0.381382095467167,0.690359926060101,0.397832444232549,0,0,0,0,0.327543835020193,0.295712172434091,0,0,0,0,0,0,0,0.879356221798103,0,0,0,0,0,0,0,0,0,0,0.118193840883968,2.00216523405724,0.078493092850514,0,0.280272163313789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0.111855431797792,0.098150233615243,0.487671699929078,1.94228651156368,0.102662806856247,0,0,0.233939463462106,1.98950775161368,0.118920090777569,1.1294608203896,0,0.150962843566674,0,0,0,0,0,0,0,0,0.169927114687817,0,0,0,0.178553938605658,0.352894871715692,0,1.46067277649303,0,0.430018749454354,0,0,0,0,0,0,0,0.126166424835079,0,0,0.101988829741982,0.26721740526556,1.10273879441814,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0.217716747896961,0,0.404112318087525,0,0,0.89543595472072,0.747091421144008,0,0.359300808426348,0,0,0,0,0,0 | |||
|short_description=p4@SIM2 | |||
}} |
Latest revision as of 08:01, 18 September 2015
Short description: | p4@SIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SIM2_5end |
Coexpression cluster: | C2630_extraskeletal_Fibroblast_Smooth_Aortic_mesothelioma_prostate_small |
Association with transcript: | 54bp_to_ENST00000290399, ENST00000481185_5end |
EntrezGene: | SIM2 |
HGNC: | 10883 |
UniProt: | Q14190 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
aortic smooth muscle cell | 1.59e-11 | 10 |
epithelial cell of nephron | 1.39e-07 | 15 |
vascular associated smooth muscle cell | 2.08e-07 | 32 |
kidney tubule cell | 9.63e-07 | 10 |
nephron tubule epithelial cell | 9.63e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 9.79e-09 | 1 |
extraosseous chondrosarcoma | 9.79e-09 | 1 |
myxoid chondrosarcoma | 9.79e-09 | 1 |
extraskeletal myxoid chondrosarcoma | 9.79e-09 | 1 |
cystadenocarcinoma | 1.88e-08 | 1 |
mucinous cystadenocarcinoma | 1.88e-08 | 1 |
organ system benign neoplasm | 2.89e-08 | 1 |
skin benign neoplasm | 2.89e-08 | 1 |
integumentary system benign neoplasm | 2.89e-08 | 1 |
dermis tumor | 2.89e-08 | 1 |
cutaneous fibrous histiocytoma | 2.89e-08 | 1 |