FFCP PHASE1:Hg19::chr1:47697591..47697604,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:47697591..47697604,-
|short_description=p11@TAL1
|description=CAGE_peak_11_at_TAL1_5end
|association_with_transcript=-204bp_to_ENST00000371884,uc001cqy.2_5...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6886 | |EntrezGene=6886 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11556 | |HGNC=11556 | ||
|TSSclassifier=strong | |||
|UniProt=P17542 | |UniProt=P17542 | ||
|association_with_transcript=-204bp_to_ENST00000371884,uc001cqy.2_5end | |||
|cluster_id=chr1:47697591..47697604,- | |||
|description=CAGE_peak_11_at_TAL1_5end | |||
|id=chr1:47697591..47697604,- | |||
|ontology_enrichment_celltype=CL:0002139!1.29e-29!24;CL:0000115!3.14e-24!35;CL:0000071!4.47e-22!18;CL:0002546!4.47e-22!18;CL:0002078!1.47e-17!44;CL:0000213!7.57e-13!57;CL:0000215!7.57e-13!57;CL:1000413!5.89e-12!9;CL:0002544!1.12e-10!6;CL:0002274!1.09e-09!5;CL:0000457!1.09e-09!5;CL:0002191!1.09e-09!5;CL:0000097!1.09e-09!5;CL:0000831!1.09e-09!5;CL:0002028!1.09e-09!5;CL:0005020!4.32e-09!6;CL:0002138!4.32e-09!6;CL:0005022!4.32e-09!6;CL:0002543!2.69e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0000071;1.42e-36;18!CL:0002139;6.45e-27;24!CL:1000413;1.21e-22;9!CL:0000115;6.59e-22;36!CL:0000097;7.76e-20;5!CL:0002544;1.15e-15;6!CL:0002078;2.89e-15;45!CL:0000764;1.39e-12;2!CL:0000558;1.39e-12;2!CL:0000163;4.50e-11;9!CL:0002543;3.70e-09;6!CL:0000213;7.68e-09;58!CL:0000215;7.68e-09;58!CL:0002144;1.12e-08;3!CL:0002618;1.12e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000071,1.59e-36,18;CL:0002546,1.59e-36,18;CL:0000115,3.57e-28,36;CL:0002139,7.01e-27,24;CL:1000413,1.44e-22,9;CL:0002078,5.79e-22,45;CL:0000097,9.88e-20,5;CL:0002028,9.88e-20,5;CL:0000213,2.13e-16,58;CL:0000215,2.13e-16,58;CL:0002544,8.49e-16,6;CL:0000764,5.96e-13,2;CL:0000765,5.96e-13,2;CL:0000050,5.96e-13,2;CL:0000038,5.96e-13,2;CL:0000558,5.96e-13,2;CL:0000547,5.96e-13,2;CL:0000549,5.96e-13,2;CL:0000550,5.96e-13,2;CL:0000552,5.96e-13,2;CL:0000163,5.12e-11,9;CL:0000763,2.39e-10,108;CL:0000049,2.39e-10,108;CL:0002543,4.15e-09,6;CL:0000076,5.70e-09,63;CL:0002144,9.09e-09,3;CL:0002618,1.56e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;1.42e-36;18!UBERON:0000358;2.51e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!7.94e-15!31;DOID:1240!5.44e-12!39;DOID:1036!9.10e-10!8;DOID:2531!7.91e-08!51;DOID:0060083!7.91e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.90e-16;31!DOID:1036;2.07e-11;8!DOID:1240;8.67e-11;39!DOID:8552;6.30e-07;1!DOID:2531;9.73e-07;51!DOID:0060083;9.73e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,8.22e-17,31;DOID:1240,5.36e-13,39;DOID:1036,2.58e-11,8;DOID:2531,1.60e-09,51;DOID:0060083,1.60e-09,51;DOID:8552,5.14e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.64e-23!115;UBERON:0001986!4.47e-22!18;UBERON:0004638!4.47e-22!18;UBERON:0004852!4.47e-22!18;UBERON:0000487!4.28e-17!22;UBERON:0006914!2.00e-14!25;UBERON:0003915!5.89e-12!9;UBERON:0004700!5.89e-12!9;UBERON:0001917!5.89e-12!9;UBERON:0000055!4.67e-11!69;UBERON:0004111!8.45e-10!241;UBERON:0002049!1.16e-08!79;UBERON:0007798!1.16e-08!79;UBERON:0000025!5.08e-08!194;UBERON:0000477!5.64e-08!286;UBERON:0001981!9.90e-08!60;UBERON:0007500!9.90e-08!60;UBERON:0004537!9.90e-08!60;UBERON:0006965!9.90e-08!60;UBERON:0004872!1.34e-07!84 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.42e-36;18!UBERON:0001986;1.42e-36;18!UBERON:0004852;1.42e-36;18!UBERON:0000487;1.50e-29;22!UBERON:0006914;9.30e-26;25!UBERON:0003915;1.21e-22;9!UBERON:0004700;1.21e-22;9!UBERON:0001917;1.21e-22;9!UBERON:0000490;5.68e-19;33!UBERON:0010523;1.12e-08;3!UBERON:0001915;1.12e-08;3!UBERON:0001982;1.12e-08;3!UBERON:0007500;3.03e-07;56!UBERON:0001981;3.03e-07;56!UBERON:0004537;3.03e-07;56!UBERON:0002146;6.30e-07;1!UBERON:0005623;6.30e-07;1!UBERON:0003914;8.41e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,1.59e-36,18;UBERON:0001986,1.59e-36,18;UBERON:0004852,1.59e-36,18;UBERON:0000487,1.64e-29,22;UBERON:0006914,1.01e-25,25;UBERON:0003915,1.44e-22,9;UBERON:0004700,1.44e-22,9;UBERON:0001917,1.44e-22,9;UBERON:0007500,9.79e-14,59;UBERON:0001981,9.79e-14,59;UBERON:0004537,9.79e-14,59;UBERON:0006965,9.79e-14,59;UBERON:0000055,1.41e-11,68;UBERON:0002049,9.13e-10,78;UBERON:0007798,9.13e-10,78;UBERON:0003914,4.50e-09,117;UBERON:0004872,5.02e-09,83;UBERON:0010523,9.09e-09,3;UBERON:0001915,9.09e-09,3;UBERON:0001982,9.09e-09,3;UBERON:0003081,4.31e-07,203;UBERON:0002146,7.29e-07,1;UBERON:0005623,7.29e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,2.58070378531837,1.38856200643038,1.69592382577203,2.09749718104953,1.10047216776027,0,0.516833518338658,0.71153252537342,0.66944122552934,0.805658634218294,2.28081631715554,1.70843440283719,0.735326160691737,2.43042584364528,2.05389375053383,1.34717623575702,0.675668882899933,1.53316637465883,0,0.732806975721629,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,2.0251139823042,3.7319060797339,5.47655822984453,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,1.36074964221213,0.647747748306418,1.54227252690289,0,0,0,0,0,2.85037839639715,1.8300481571743,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0.797131363644112,0.399158742865633,0,1.48171507906718,0,0.280797178113459,0,0,2.50634477090067,0.50787533340481,0,0,0,0,0,0.223676107892416,0,0,0.835218521685727,2.46174797895425,4.8682022125677,0.66614393599564,2.81974010175699,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0,0,0,1.72678282034527,1.49590513710141,1.1279783030859,0.784250137270958,1.1747511088309,0.37950746544837,0.635746315921515,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,0.468528891450678,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,1.3749625440701,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,1.39557285273876,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.943225830597996,0.414239055347196,0,0,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.202612753855184,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.594092800654172,0,0,0.375935671919414,0.966868319603658,0,0,0,0,1.46067277649303,0,0.716697915757256,0,0.271965960763659,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0.426467963801962,0.23806443146374,0,0.124149428591716,0,0.12729431655633,0.606351566874658,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0.79504962946682,2.58070378531837,1.38856200643038,1.69592382577203,2.09749718104953,1.10047216776027,0,0.516833518338658,0.71153252537342,0.66944122552934,0.805658634218294,2.28081631715554,1.70843440283719,0.735326160691737,2.43042584364528,2.05389375053383,1.34717623575702,0.675668882899933,1.53316637465883,0,0.732806975721629,0,0,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,0,0,0,0,0.590789906681404,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0.577465791044295,0.925971025153221,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,2.0251139823042,3.7319060797339,5.47655822984453,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,1.36074964221213,0.647747748306418,1.54227252690289,0,0,0,0,0,2.85037839639715,1.8300481571743,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0,0,0,0,0.797131363644112,0.399158742865633,0,1.48171507906718,0,0.280797178113459,0,0,2.50634477090067,0.50787533340481,0,0,0,0,0,0.223676107892416,0,0,0.835218521685727,2.46174797895425,4.8682022125677,0.66614393599564,2.81974010175699,0,0.439524537815682,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0.398495976502139,0.276283915531148,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173624994933292,0,0.120596438625408,0,0.110579259931225,0,0,0,0,0.538651809526579,0,0,0,0,0.31900115973192,0,0,0,1.72678282034527,1.49590513710141,1.1279783030859,0.784250137270958,1.1747511088309,0.37950746544837,0.635746315921515,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.539209063845416,0,0.468528891450678,0,0,0,0,0,0,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,1.3749625440701,0,0,0,0,0.403100834920358,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.242998226632099,0,0.0788057072991982,0.104909176269996,0,0,0,0.714695326373367,0,0,0,0,0,0,1.39557285273876,0,0,0,1.32506888912221,0.129282956361551,0.13223260174269,0,0,0.427149650270779,0.943225830597996,0.414239055347196,0,0,0,0.638341257770182,0,0,0.306345576763462,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.638535436228605,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0.781514011233092,0,0,0,0.202612753855184,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.354809480650555,0,0,0.135939465953663,0.197318320688547,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0.594092800654172,0,0,0.375935671919414,0.966868319603658,0,0,0,0,1.46067277649303,0,0.716697915757256,0,0.271965960763659,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0.20686599172379,0.426467963801962,0.23806443146374,0,0.124149428591716,0,0.12729431655633,0.606351566874658,0.217716747896961,0,0.0673520530145875,0.0717222053926763,0,0,0,0,0,2.34640942403454,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p11@TAL1 | |||
}} | }} |
Latest revision as of 09:57, 18 September 2015
Short description: | p11@TAL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_TAL1_5end |
Coexpression cluster: | NA |
Association with transcript: | -204bp_to_ENST00000371884, uc001cqy.2_5end |
EntrezGene: | TAL1 |
HGNC: | 11556 |
UniProt: | P17542 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
blood vessel endothelial cell | 1.59e-36 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.59e-36 | 18 |
endothelial cell | 3.57e-28 | 36 |
endothelial cell of vascular tree | 7.01e-27 | 24 |
endothelial cell of artery | 1.44e-22 | 9 |
meso-epithelial cell | 5.79e-22 | 45 |
mast cell | 9.88e-20 | 5 |
basophil mast progenitor cell | 9.88e-20 | 5 |
lining cell | 2.13e-16 | 58 |
barrier cell | 2.13e-16 | 58 |
aortic endothelial cell | 8.49e-16 | 6 |
erythroid lineage cell | 5.96e-13 | 2 |
erythroblast | 5.96e-13 | 2 |
megakaryocyte-erythroid progenitor cell | 5.96e-13 | 2 |
erythroid progenitor cell | 5.96e-13 | 2 |
reticulocyte | 5.96e-13 | 2 |
proerythroblast | 5.96e-13 | 2 |
basophilic erythroblast | 5.96e-13 | 2 |
polychromatophilic erythroblast | 5.96e-13 | 2 |
orthochromatic erythroblast | 5.96e-13 | 2 |
endocrine cell | 5.12e-11 | 9 |
myeloid cell | 2.39e-10 | 108 |
common myeloid progenitor | 2.39e-10 | 108 |
vein endothelial cell | 4.15e-09 | 6 |
squamous epithelial cell | 5.70e-09 | 63 |
capillary endothelial cell | 9.09e-09 | 3 |
endothelial cell of umbilical vein | 1.56e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 1.59e-36 | 18 |
endothelium | 1.59e-36 | 18 |
cardiovascular system endothelium | 1.59e-36 | 18 |
simple squamous epithelium | 1.64e-29 | 22 |
squamous epithelium | 1.01e-25 | 25 |
endothelial tube | 1.44e-22 | 9 |
arterial system endothelium | 1.44e-22 | 9 |
endothelium of artery | 1.44e-22 | 9 |
epithelial tube open at both ends | 9.79e-14 | 59 |
blood vessel | 9.79e-14 | 59 |
blood vasculature | 9.79e-14 | 59 |
vascular cord | 9.79e-14 | 59 |
vessel | 1.41e-11 | 68 |
vasculature | 9.13e-10 | 78 |
vascular system | 9.13e-10 | 78 |
epithelial tube | 4.50e-09 | 117 |
splanchnic layer of lateral plate mesoderm | 5.02e-09 | 83 |
microcirculatory vessel | 9.09e-09 | 3 |
endothelium of capillary | 9.09e-09 | 3 |
capillary | 9.09e-09 | 3 |
lateral plate mesoderm | 4.31e-07 | 203 |
pulmonary valve | 7.29e-07 | 1 |
semi-lunar valve | 7.29e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 8.22e-17 | 31 |
leukemia | 5.36e-13 | 39 |
chronic leukemia | 2.58e-11 | 8 |
hematologic cancer | 1.60e-09 | 51 |
immune system cancer | 1.60e-09 | 51 |
chronic myeloid leukemia | 5.14e-07 | 1 |