FFCP PHASE1:Hg19::chr17:80291627..80291651,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6398 | |EntrezGene=6398 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10707 | |HGNC=10707 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVN6 | |UniProt=Q8WVN6 | ||
|association_with_transcript=269bp_to_ENST00000269389,NM_003004,uc002keo.2,uc002kep.2_5end | |association_with_transcript=269bp_to_ENST00000269389,NM_003004,uc002keo.2,uc002kep.2_5end | ||
|cluster_id=chr17:80291627..80291651,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_2_at_SECTM1_5end | |description=CAGE_peak_2_at_SECTM1_5end | ||
|id=chr17:80291627..80291651,- | |id=chr17:80291627..80291651,- | ||
|ontology_enrichment_celltype=CL:0002057!2.50e-27!42;CL:0000860!3.81e-26!45;CL:0000766!2.82e-25!76;CL:0002194!1.96e-24!63;CL:0000576!1.96e-24!63;CL:0000040!1.96e-24!63;CL:0000559!1.96e-24!63;CL:0002009!3.86e-23!65;CL:0000839!6.29e-19!70;CL:0000557!8.53e-19!71;CL:0000763!1.95e-07!112;CL:0000049!1.95e-07!112;CL:0002393!3.17e-07!9;CL:0002397!3.17e-07!9 | |ontology_enrichment_celltype=CL:0002057!2.50e-27!42;CL:0000860!3.81e-26!45;CL:0000766!2.82e-25!76;CL:0002194!1.96e-24!63;CL:0000576!1.96e-24!63;CL:0000040!1.96e-24!63;CL:0000559!1.96e-24!63;CL:0002009!3.86e-23!65;CL:0000839!6.29e-19!70;CL:0000557!8.53e-19!71;CL:0000763!1.95e-07!112;CL:0000049!1.95e-07!112;CL:0002393!3.17e-07!9;CL:0002397!3.17e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.12e-20;33!CL:0002057;1.12e-20;33!CL:0000576;7.47e-19;48!CL:0000473;3.63e-18;39!CL:0000234;3.63e-18;39!CL:0000766;3.05e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.03e-29,48;CL:0000234,1.03e-29,48;CL:0000860,9.26e-29,42;CL:0002057,9.26e-29,42;CL:0000766,1.53e-27,72;CL:0002194,3.97e-27,59;CL:0000576,3.97e-27,59;CL:0000040,3.97e-27,59;CL:0000559,3.97e-27,59;CL:0002009,4.47e-25,61;CL:0000839,5.66e-21,66;CL:0000557,3.64e-20,67;CL:0000763,4.41e-09,108;CL:0000049,4.41e-09,108;CL:0002393,1.54e-07,9;CL:0002397,1.54e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;6.91e-21;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.87e-19!102;UBERON:0003061!2.87e-19!102;UBERON:0002193!6.97e-18!112;UBERON:0002371!7.74e-17!80;UBERON:0004765!1.17e-15!101;UBERON:0001434!1.17e-15!101;UBERON:0002204!5.32e-15!167;UBERON:0001474!1.71e-14!86;UBERON:0000926!2.30e-13!448;UBERON:0004120!2.30e-13!448;UBERON:0006603!2.30e-13!448;UBERON:0002405!1.10e-11!115;UBERON:0000467!1.73e-09!625;UBERON:0000480!2.19e-09!626;UBERON:0002050!7.34e-09!605;UBERON:0005423!7.34e-09!605;UBERON:0000062!1.22e-08!511;UBERON:0000923!1.24e-08!604;UBERON:0005291!1.24e-08!604;UBERON:0006598!1.24e-08!604;UBERON:0002532!1.24e-08!604;UBERON:0000468!2.04e-08!659;UBERON:0000922!2.59e-08!612;UBERON:0003081!8.83e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!2.87e-19!102;UBERON:0003061!2.87e-19!102;UBERON:0002193!6.97e-18!112;UBERON:0002371!7.74e-17!80;UBERON:0004765!1.17e-15!101;UBERON:0001434!1.17e-15!101;UBERON:0002204!5.32e-15!167;UBERON:0001474!1.71e-14!86;UBERON:0000926!2.30e-13!448;UBERON:0004120!2.30e-13!448;UBERON:0006603!2.30e-13!448;UBERON:0002405!1.10e-11!115;UBERON:0000467!1.73e-09!625;UBERON:0000480!2.19e-09!626;UBERON:0002050!7.34e-09!605;UBERON:0005423!7.34e-09!605;UBERON:0000062!1.22e-08!511;UBERON:0000923!1.24e-08!604;UBERON:0005291!1.24e-08!604;UBERON:0006598!1.24e-08!604;UBERON:0002532!1.24e-08!604;UBERON:0000468!2.04e-08!659;UBERON:0000922!2.59e-08!612;UBERON:0003081!8.83e-08!216 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.13e-21,98;UBERON:0003061,5.13e-21,98;UBERON:0002193,1.56e-18,108;UBERON:0002371,4.74e-18,76;UBERON:0001434,7.76e-18,100;UBERON:0004765,6.04e-17,90;UBERON:0002204,2.87e-16,167;UBERON:0001474,7.82e-16,82;UBERON:0002405,1.32e-14,93;UBERON:0000926,9.21e-11,315;UBERON:0004120,9.21e-11,315;UBERON:0006603,9.21e-11,315;UBERON:0000923,5.95e-09,560;UBERON:0010316,5.95e-09,560;UBERON:0005291,5.95e-09,560;UBERON:0006598,5.95e-09,560;UBERON:0010317,5.95e-09,560;UBERON:0002532,5.95e-09,560;UBERON:0002050,6.23e-09,564;UBERON:0003081,1.70e-08,203;UBERON:0005423,5.44e-07,581;UBERON:0001007,7.93e-07,145;UBERON:0001555,7.93e-07,145;UBERON:0007026,7.93e-07,145 | |||
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| ||
|short_description=p2@SECTM1 | |short_description=p2@SECTM1 | ||
}} | }} |
Latest revision as of 12:27, 18 September 2015
Short description: | p2@SECTM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SECTM1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 269bp_to_ENST00000269389, NM_003004, uc002keo.2, uc002kep.2_5end |
EntrezGene: | SECTM1 |
HGNC: | 10707 |
UniProt: | Q8WVN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.03e-29 | 48 |
phagocyte | 1.03e-29 | 48 |
classical monocyte | 9.26e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.26e-29 | 42 |
myeloid leukocyte | 1.53e-27 | 72 |
monopoietic cell | 3.97e-27 | 59 |
monocyte | 3.97e-27 | 59 |
monoblast | 3.97e-27 | 59 |
promonocyte | 3.97e-27 | 59 |
macrophage dendritic cell progenitor | 4.47e-25 | 61 |
myeloid lineage restricted progenitor cell | 5.66e-21 | 66 |
granulocyte monocyte progenitor cell | 3.64e-20 | 67 |
myeloid cell | 4.41e-09 | 108 |
common myeloid progenitor | 4.41e-09 | 108 |
intermediate monocyte | 1.54e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.54e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.13e-21 | 98 |
blood island | 5.13e-21 | 98 |
hemolymphoid system | 1.56e-18 | 108 |
bone marrow | 4.74e-18 | 76 |
skeletal system | 7.76e-18 | 100 |
skeletal element | 6.04e-17 | 90 |
musculoskeletal system | 2.87e-16 | 167 |
bone element | 7.82e-16 | 82 |
immune system | 1.32e-14 | 93 |
mesoderm | 9.21e-11 | 315 |
mesoderm-derived structure | 9.21e-11 | 315 |
presumptive mesoderm | 9.21e-11 | 315 |
germ layer | 5.95e-09 | 560 |
germ layer / neural crest | 5.95e-09 | 560 |
embryonic tissue | 5.95e-09 | 560 |
presumptive structure | 5.95e-09 | 560 |
germ layer / neural crest derived structure | 5.95e-09 | 560 |
epiblast (generic) | 5.95e-09 | 560 |
embryonic structure | 6.23e-09 | 564 |
lateral plate mesoderm | 1.70e-08 | 203 |
developing anatomical structure | 5.44e-07 | 581 |
digestive system | 7.93e-07 | 145 |
digestive tract | 7.93e-07 | 145 |
primitive gut | 7.93e-07 | 145 |