FFCP PHASE1:Hg19::chr10:56561022..56561033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65217 | |EntrezGene=65217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14674 | |HGNC=14674 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QU1,A2A3E7,F8WCD8,A9Z1W1,A2A3E6,E7EMG0,A2A3E8,A2A3E3,A2A3E5,A2A3E1,A2A3E2,A2A3E4,B7ZBT8,E7EM97,C9J4F3,C9JIG1,E7EM53,E7EMG8,E7EQF1 | |UniProt=Q96QU1,A2A3E7,F8WCD8,A9Z1W1,A2A3E6,E7EMG0,A2A3E8,A2A3E3,A2A3E5,A2A3E1,A2A3E2,A2A3E4,B7ZBT8,E7EM97,C9J4F3,C9JIG1,E7EM53,E7EMG8,E7EQF1 | ||
|association_with_transcript=17bp_to_ENST00000320301,ENST00000361849,ENST00000373956,ENST00000373965,ENST00000395430,ENST00000395432,ENST00000395433,ENST00000395438,ENST00000395440,ENST00000395442,ENST00000395445,ENST00000395446,ENST00000409834,ENST00000414367,ENST00000414778,ENST00000417177,ENST00000437009,ENST00000448885,ENST00000455746,ENST00000495484,NM_001142763,NM_001142764,NM_001142765,NM_001142766,NM_001142767,NM_001142768,NM_001142769,NM_001142770,NM_001142771,NM_001142772,NM_001142773,NM_033056,uc001jju.1,uc001jjw.2,uc010qhq.1,uc010qhr.1,uc010qhs.1,uc010qht.1,uc010qhu.1,uc010qhv.1,uc010qhw.1,uc010qhx.1,uc010qhy.1,uc010qhz.1,uc010qia.1,uc010qib.1_5end | |association_with_transcript=17bp_to_ENST00000320301,ENST00000361849,ENST00000373956,ENST00000373965,ENST00000395430,ENST00000395432,ENST00000395433,ENST00000395438,ENST00000395440,ENST00000395442,ENST00000395445,ENST00000395446,ENST00000409834,ENST00000414367,ENST00000414778,ENST00000417177,ENST00000437009,ENST00000448885,ENST00000455746,ENST00000495484,NM_001142763,NM_001142764,NM_001142765,NM_001142766,NM_001142767,NM_001142768,NM_001142769,NM_001142770,NM_001142771,NM_001142772,NM_001142773,NM_033056,uc001jju.1,uc001jjw.2,uc010qhq.1,uc010qhr.1,uc010qhs.1,uc010qht.1,uc010qhu.1,uc010qhv.1,uc010qhw.1,uc010qhx.1,uc010qhy.1,uc010qhz.1,uc010qia.1,uc010qib.1_5end | ||
|cluster_id=chr10:56561022..56561033,- | |||
|coexpression_cluster_id=C2065 | |||
|description=CAGE_peak_4_at_PCDH15_5end | |description=CAGE_peak_4_at_PCDH15_5end | ||
|id=chr10:56561022..56561033,- | |id=chr10:56561022..56561033,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;1.82e-07;3!UBERON:0006241;2.88e-07;3!UBERON:0003057;2.88e-07;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.63e-66!57;UBERON:0005068!3.63e-66!57;UBERON:0006241!3.63e-66!57;UBERON:0007135!3.63e-66!57;UBERON:0002616!1.18e-52!59;UBERON:0003075!2.76e-52!86;UBERON:0007284!2.76e-52!86;UBERON:0005743!2.13e-51!86;UBERON:0001017!3.85e-51!82;UBERON:0000073!4.91e-51!94;UBERON:0001016!4.91e-51!94;UBERON:0002346!1.55e-49!90;UBERON:0002020!2.74e-49!34;UBERON:0003528!2.74e-49!34;UBERON:0001893!7.69e-49!34;UBERON:0002791!4.59e-46!33;UBERON:0000955!5.76e-46!69;UBERON:0006238!5.76e-46!69;UBERON:0001869!1.86e-43!32;UBERON:0002780!2.47e-43!41;UBERON:0001890!2.47e-43!41;UBERON:0006240!2.47e-43!41;UBERON:0003080!3.62e-42!42;UBERON:0007023!7.54e-39!115;UBERON:0002619!1.49e-37!22;UBERON:0000956!1.04e-32!25;UBERON:0000203!1.04e-32!25;UBERON:0003056!2.04e-32!61;UBERON:0001950!1.16e-31!20;UBERON:0000033!3.56e-29!123;UBERON:0004121!8.17e-29!169;UBERON:0000924!6.54e-28!173;UBERON:0006601!6.54e-28!173;UBERON:0000153!2.14e-27!129;UBERON:0007811!2.14e-27!129;UBERON:0003076!4.18e-25!15;UBERON:0003057!4.18e-25!15;UBERON:0002308!3.15e-18!9;UBERON:0000125!3.15e-18!9;UBERON:0000025!1.66e-17!194;UBERON:0004733!5.48e-17!12;UBERON:0002028!5.48e-17!12;UBERON:0007277!5.48e-17!12;UBERON:0004732!1.43e-15!13;UBERON:0002298!1.91e-15!8;UBERON:0001871!2.56e-14!7;UBERON:0002420!1.83e-13!9;UBERON:0007245!1.83e-13!9;UBERON:0010009!1.83e-13!9;UBERON:0010011!1.83e-13!9;UBERON:0000454!1.83e-13!9;UBERON:0000200!2.73e-13!6;UBERON:0004111!4.32e-13!241;UBERON:0002680!4.75e-13!9;UBERON:0001895!4.75e-13!9;UBERON:0010092!4.75e-13!9;UBERON:0000477!1.18e-12!286;UBERON:0000064!1.69e-12!219;UBERON:0009663!3.15e-12!7;UBERON:0000483!6.79e-12!309;UBERON:0000349!7.81e-12!5;UBERON:0000119!1.12e-11!312;UBERON:0000988!1.76e-11!3;UBERON:0006331!2.56e-11!3;UBERON:0002240!1.21e-10!3;UBERON:0000475!1.74e-10!365;UBERON:0002021!1.79e-10!5;UBERON:0002771!2.73e-10!3;UBERON:0000369!1.40e-08!4;UBERON:0002435!1.40e-08!4;UBERON:0000204!1.40e-08!4;UBERON:0010082!1.40e-08!4;UBERON:0002148!3.26e-08!2;UBERON:0009662!3.26e-08!2;UBERON:0001954!3.50e-08!2;UBERON:0003022!3.50e-08!2;UBERON:0002421!3.50e-08!2;UBERON:0002600!3.50e-08!2;UBERON:0001873!5.11e-08!2;UBERON:0010122!5.11e-08!2;UBERON:0000481!8.94e-07!347 | |ontology_enrichment_uberon=UBERON:0001049!3.63e-66!57;UBERON:0005068!3.63e-66!57;UBERON:0006241!3.63e-66!57;UBERON:0007135!3.63e-66!57;UBERON:0002616!1.18e-52!59;UBERON:0003075!2.76e-52!86;UBERON:0007284!2.76e-52!86;UBERON:0005743!2.13e-51!86;UBERON:0001017!3.85e-51!82;UBERON:0000073!4.91e-51!94;UBERON:0001016!4.91e-51!94;UBERON:0002346!1.55e-49!90;UBERON:0002020!2.74e-49!34;UBERON:0003528!2.74e-49!34;UBERON:0001893!7.69e-49!34;UBERON:0002791!4.59e-46!33;UBERON:0000955!5.76e-46!69;UBERON:0006238!5.76e-46!69;UBERON:0001869!1.86e-43!32;UBERON:0002780!2.47e-43!41;UBERON:0001890!2.47e-43!41;UBERON:0006240!2.47e-43!41;UBERON:0003080!3.62e-42!42;UBERON:0007023!7.54e-39!115;UBERON:0002619!1.49e-37!22;UBERON:0000956!1.04e-32!25;UBERON:0000203!1.04e-32!25;UBERON:0003056!2.04e-32!61;UBERON:0001950!1.16e-31!20;UBERON:0000033!3.56e-29!123;UBERON:0004121!8.17e-29!169;UBERON:0000924!6.54e-28!173;UBERON:0006601!6.54e-28!173;UBERON:0000153!2.14e-27!129;UBERON:0007811!2.14e-27!129;UBERON:0003076!4.18e-25!15;UBERON:0003057!4.18e-25!15;UBERON:0002308!3.15e-18!9;UBERON:0000125!3.15e-18!9;UBERON:0000025!1.66e-17!194;UBERON:0004733!5.48e-17!12;UBERON:0002028!5.48e-17!12;UBERON:0007277!5.48e-17!12;UBERON:0004732!1.43e-15!13;UBERON:0002298!1.91e-15!8;UBERON:0001871!2.56e-14!7;UBERON:0002420!1.83e-13!9;UBERON:0007245!1.83e-13!9;UBERON:0010009!1.83e-13!9;UBERON:0010011!1.83e-13!9;UBERON:0000454!1.83e-13!9;UBERON:0000200!2.73e-13!6;UBERON:0004111!4.32e-13!241;UBERON:0002680!4.75e-13!9;UBERON:0001895!4.75e-13!9;UBERON:0010092!4.75e-13!9;UBERON:0000477!1.18e-12!286;UBERON:0000064!1.69e-12!219;UBERON:0009663!3.15e-12!7;UBERON:0000483!6.79e-12!309;UBERON:0000349!7.81e-12!5;UBERON:0000119!1.12e-11!312;UBERON:0000988!1.76e-11!3;UBERON:0006331!2.56e-11!3;UBERON:0002240!1.21e-10!3;UBERON:0000475!1.74e-10!365;UBERON:0002021!1.79e-10!5;UBERON:0002771!2.73e-10!3;UBERON:0000369!1.40e-08!4;UBERON:0002435!1.40e-08!4;UBERON:0000204!1.40e-08!4;UBERON:0010082!1.40e-08!4;UBERON:0002148!3.26e-08!2;UBERON:0009662!3.26e-08!2;UBERON:0001954!3.50e-08!2;UBERON:0003022!3.50e-08!2;UBERON:0002421!3.50e-08!2;UBERON:0002600!3.50e-08!2;UBERON:0001873!5.11e-08!2;UBERON:0010122!5.11e-08!2;UBERON:0000481!8.94e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0000349;1.21e-32;5!UBERON:0001882;3.56e-19;1!UBERON:0005403;3.56e-19;1!UBERON:0003528;6.47e-12;34!UBERON:0002020;6.47e-12;34!UBERON:0001876;2.85e-10;2!UBERON:0001954;2.85e-10;2!UBERON:0002148;2.85e-10;2!UBERON:0006331;2.85e-10;2!UBERON:0009662;2.85e-10;2!UBERON:0003022;2.85e-10;2!UBERON:0002421;2.85e-10;2!UBERON:0002600;2.85e-10;2!UBERON:0002791;1.74e-09;32!UBERON:0001869;1.74e-09;32!UBERON:0002420;6.61e-09;9!UBERON:0000125;6.61e-09;9!UBERON:0007245;6.61e-09;9!UBERON:0002308;6.61e-09;9!UBERON:0010009;6.61e-09;9!UBERON:0010011;6.61e-09;9!UBERON:0000454;6.61e-09;9!UBERON:0002780;4.92e-08;41!UBERON:0001890;4.92e-08;41!UBERON:0001893;1.21e-07;34!UBERON:0002619;1.29e-07;22!UBERON:0002369;2.12e-07;3!UBERON:0001235;2.12e-07;3!UBERON:0006858;2.12e-07;3!UBERON:0000988;2.88e-07;3!UBERON:0002240;2.88e-07;3!UBERON:0005174;2.88e-07;3!UBERON:0001137;2.88e-07;3!UBERON:0000073;4.80e-07;53!UBERON:0002616;4.80e-07;53!UBERON:0000956;8.45e-07;25!UBERON:0000203;8.45e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000349,1.43e-32,5;UBERON:0001882,4.69e-19,1;UBERON:0005403,4.69e-19,1;UBERON:0003528,7.96e-13,34;UBERON:0002020,7.96e-13,34;UBERON:0001049,3.74e-11,56;UBERON:0005068,3.74e-11,56;UBERON:0006241,3.74e-11,56;UBERON:0007135,3.74e-11,56;UBERON:0001876,2.72e-10,2;UBERON:0003075,2.82e-10,82;UBERON:0007284,2.82e-10,82;UBERON:0001954,2.99e-10,2;UBERON:0003022,2.99e-10,2;UBERON:0002421,2.99e-10,2;UBERON:0002600,2.99e-10,2;UBERON:0002148,3.58e-10,2;UBERON:0006331,3.58e-10,2;UBERON:0009662,3.58e-10,2;UBERON:0002346,8.68e-10,86;UBERON:0002791,5.25e-09,32;UBERON:0001869,5.25e-09,32;UBERON:0002420,6.88e-09,9;UBERON:0007245,6.88e-09,9;UBERON:0010009,6.88e-09,9;UBERON:0010011,6.88e-09,9;UBERON:0000454,6.88e-09,9;UBERON:0000125,7.75e-09,9;UBERON:0002308,7.75e-09,9;UBERON:0001893,1.65e-08,34;UBERON:0000073,2.45e-08,53;UBERON:0002616,2.45e-08,53;UBERON:0010314,3.65e-08,132;UBERON:0010371,4.81e-08,104;UBERON:0002619,1.24e-07,22;UBERON:0001017,1.33e-07,81;UBERON:0007023,2.24e-07,114;UBERON:0002369,2.32e-07,3;UBERON:0001235,2.32e-07,3;UBERON:0006858,2.32e-07,3;UBERON:0002240,2.47e-07,3;UBERON:0005174,2.47e-07,3;UBERON:0001137,2.47e-07,3;UBERON:0003056,2.53e-07,61;UBERON:0000988,3.35e-07,3;UBERON:0002780,3.90e-07,41;UBERON:0001890,3.90e-07,41;UBERON:0003080,3.90e-07,41;UBERON:0006240,3.90e-07,41;UBERON:0001016,7.74e-07,89;UBERON:0000956,8.20e-07,25;UBERON:0000203,8.20e-07,25 | |||
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|short_description=p4@PCDH15 | |short_description=p4@PCDH15 | ||
}} | }} |
Latest revision as of 13:37, 18 September 2015
Short description: | p4@PCDH15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PCDH15_5end |
Coexpression cluster: | C2065_eye_retina_leiomyoblastoma_spinal_hippocampus_lung_rhabdomyosarcoma |
Association with transcript: | 17bp_to_ENST00000320301, ENST00000361849, ENST00000373956, ENST00000373965, ENST00000395430, ENST00000395432, ENST00000395433, ENST00000395438, ENST00000395440, ENST00000395442, ENST00000395445, ENST00000395446, ENST00000409834, ENST00000414367, ENST00000414778, ENST00000417177, ENST00000437009, ENST00000448885, ENST00000455746, ENST00000495484, NM_001142763, NM_001142764, NM_001142765, NM_001142766, NM_001142767, NM_001142768, NM_001142769, NM_001142770, NM_001142771, NM_001142772, NM_001142773, NM_033056, uc001jju.1, uc001jjw.2, uc010qhq.1, uc010qhr.1, uc010qhs.1, uc010qht.1, uc010qhu.1, uc010qhv.1, uc010qhw.1, uc010qhx.1, uc010qhy.1, uc010qhz.1, uc010qia.1, uc010qib.1_5end |
EntrezGene: | PCDH15 |
HGNC: | 14674 |
UniProt: | Q96QU1A2A3E7F8WCD8A9Z1W1A2A3E6E7EMG0A2A3E8A2A3E3A2A3E5A2A3E1A2A3E2A2A3E4B7ZBT8E7EM97C9J4F3C9JIG1E7EM53E7EMG8E7EQF1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data