FFCP PHASE1:Hg19::chr10:56561022..56561033,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=65217 | |EntrezGene=65217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14674 | |HGNC=14674 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QU1,A2A3E7,F8WCD8,A9Z1W1,A2A3E6,E7EMG0,A2A3E8,A2A3E3,A2A3E5,A2A3E1,A2A3E2,A2A3E4,B7ZBT8,E7EM97,C9J4F3,C9JIG1,E7EM53,E7EMG8,E7EQF1 | |UniProt=Q96QU1,A2A3E7,F8WCD8,A9Z1W1,A2A3E6,E7EMG0,A2A3E8,A2A3E3,A2A3E5,A2A3E1,A2A3E2,A2A3E4,B7ZBT8,E7EM97,C9J4F3,C9JIG1,E7EM53,E7EMG8,E7EQF1 | ||
|association_with_transcript=17bp_to_ENST00000320301,ENST00000361849,ENST00000373956,ENST00000373965,ENST00000395430,ENST00000395432,ENST00000395433,ENST00000395438,ENST00000395440,ENST00000395442,ENST00000395445,ENST00000395446,ENST00000409834,ENST00000414367,ENST00000414778,ENST00000417177,ENST00000437009,ENST00000448885,ENST00000455746,ENST00000495484,NM_001142763,NM_001142764,NM_001142765,NM_001142766,NM_001142767,NM_001142768,NM_001142769,NM_001142770,NM_001142771,NM_001142772,NM_001142773,NM_033056,uc001jju.1,uc001jjw.2,uc010qhq.1,uc010qhr.1,uc010qhs.1,uc010qht.1,uc010qhu.1,uc010qhv.1,uc010qhw.1,uc010qhx.1,uc010qhy.1,uc010qhz.1,uc010qia.1,uc010qib.1_5end | |association_with_transcript=17bp_to_ENST00000320301,ENST00000361849,ENST00000373956,ENST00000373965,ENST00000395430,ENST00000395432,ENST00000395433,ENST00000395438,ENST00000395440,ENST00000395442,ENST00000395445,ENST00000395446,ENST00000409834,ENST00000414367,ENST00000414778,ENST00000417177,ENST00000437009,ENST00000448885,ENST00000455746,ENST00000495484,NM_001142763,NM_001142764,NM_001142765,NM_001142766,NM_001142767,NM_001142768,NM_001142769,NM_001142770,NM_001142771,NM_001142772,NM_001142773,NM_033056,uc001jju.1,uc001jjw.2,uc010qhq.1,uc010qhr.1,uc010qhs.1,uc010qht.1,uc010qhu.1,uc010qhv.1,uc010qhw.1,uc010qhx.1,uc010qhy.1,uc010qhz.1,uc010qia.1,uc010qib.1_5end | ||
|cluster_id=chr10:56561022..56561033,- | |||
|coexpression_cluster_id=C2065 | |coexpression_cluster_id=C2065 | ||
|description=CAGE_peak_4_at_PCDH15_5end | |description=CAGE_peak_4_at_PCDH15_5end | ||
Latest revision as of 13:37, 18 September 2015
| Short description: | p4@PCDH15 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_PCDH15_5end |
| Coexpression cluster: | C2065_eye_retina_leiomyoblastoma_spinal_hippocampus_lung_rhabdomyosarcoma |
| Association with transcript: | 17bp_to_ENST00000320301, ENST00000361849, ENST00000373956, ENST00000373965, ENST00000395430, ENST00000395432, ENST00000395433, ENST00000395438, ENST00000395440, ENST00000395442, ENST00000395445, ENST00000395446, ENST00000409834, ENST00000414367, ENST00000414778, ENST00000417177, ENST00000437009, ENST00000448885, ENST00000455746, ENST00000495484, NM_001142763, NM_001142764, NM_001142765, NM_001142766, NM_001142767, NM_001142768, NM_001142769, NM_001142770, NM_001142771, NM_001142772, NM_001142773, NM_033056, uc001jju.1, uc001jjw.2, uc010qhq.1, uc010qhr.1, uc010qhs.1, uc010qht.1, uc010qhu.1, uc010qhv.1, uc010qhw.1, uc010qhx.1, uc010qhy.1, uc010qhz.1, uc010qia.1, uc010qib.1_5end |
| EntrezGene: | PCDH15 |
| HGNC: | 14674 |
| UniProt: | Q96QU1A2A3E7F8WCD8A9Z1W1A2A3E6E7EMG0A2A3E8A2A3E3A2A3E5A2A3E1A2A3E2A2A3E4B7ZBT8E7EM97C9J4F3C9JIG1E7EM53E7EMG8E7EQF1 |
| Genome view: | ZENBU |
View on UCSC genome browser
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CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
