FFCP PHASE1:Hg19::chr1:170632250..170632277,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:170632250..170632277,+
|short_description=p7@PRRX1
|description=CAGE_peak_7_at_PRRX1_5end
|association_with_transcript=0bp_to_ENST00000367760_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=5396 | |EntrezGene=5396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9142 | |HGNC=9142 | ||
|TSSclassifier=strong | |||
|UniProt=P54821 | |UniProt=P54821 | ||
|association_with_transcript=0bp_to_ENST00000367760_5end | |||
|cluster_id=chr1:170632250..170632277,+ | |||
|coexpression_cluster_id=C929 | |||
|description=CAGE_peak_7_at_PRRX1_5end | |||
|id=chr1:170632250..170632277,+ | |||
|ontology_enrichment_celltype=CL:0000055!2.78e-39!180;CL:0000057!5.13e-24!75;CL:0000680!5.79e-16!57;CL:0000056!5.79e-16!57;CL:0000355!5.79e-16!57;CL:0000187!1.27e-14!54;CL:0000183!2.60e-13!59;CL:0002620!1.83e-12!23;CL:0000393!2.49e-11!60;CL:0000211!2.49e-11!60;CL:0000192!3.54e-11!42;CL:0000514!3.54e-11!42;CL:0000359!1.55e-09!32;CL:0000048!2.45e-07!430;CL:0002334!5.43e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.39e-14;23!CL:0000057;3.15e-10;73!CL:0000359;4.86e-10;32!CL:0000187;3.40e-09;55!CL:0002320;3.94e-09;188!CL:0000192;6.73e-09;43!CL:0002334;2.41e-08;12!CL:0000499;5.59e-08;28!CL:0002570;1.48e-07;8!CL:0000134;2.84e-07;55!CL:0000723;2.92e-07;61!CL:0000393;3.44e-07;61!CL:0000211;3.44e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.51e-28,76;CL:0000680,1.54e-17,58;CL:0000056,1.54e-17,58;CL:0000355,1.54e-17,58;CL:0000048,3.03e-16,427;CL:0000187,5.71e-16,55;CL:0000723,2.81e-15,433;CL:0002620,8.95e-15,23;CL:0000034,4.80e-14,441;CL:0000393,6.50e-13,61;CL:0000211,6.50e-13,61;CL:0000192,8.80e-12,43;CL:0000514,8.80e-12,43;CL:0000359,1.44e-10,32;CL:0002334,3.09e-08,12;CL:0002320,4.32e-08,361;CL:0000499,5.59e-08,28;CL:0002570,1.24e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000355;3.78e-09;58!CL:0000514;6.73e-09;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!4.77e-26!83;UBERON:0002329!4.77e-26!83;UBERON:0003077!4.77e-26!83;UBERON:0003059!4.77e-26!83;UBERON:0007282!4.77e-26!83;UBERON:0009618!4.77e-26!83;UBERON:0007285!4.77e-26!83;UBERON:0004290!1.62e-22!70;UBERON:0000486!2.26e-18!82;UBERON:0001134!1.67e-17!61;UBERON:0002036!1.67e-17!61;UBERON:0003082!1.67e-17!61;UBERON:0002385!2.35e-17!63;UBERON:0001015!2.35e-17!63;UBERON:0000383!2.35e-17!63;UBERON:0000475!2.64e-16!365;UBERON:0003102!3.70e-13!95;UBERON:0002199!3.92e-11!45;UBERON:0002416!3.92e-11!45;UBERON:0002097!1.51e-09!40;UBERON:0005256!2.11e-09!143;UBERON:0000479!8.16e-09!787;UBERON:0000481!1.25e-08!347;UBERON:0000468!5.39e-08!659;UBERON:0004872!4.00e-07!84;UBERON:0001637!4.90e-07!42;UBERON:0003509!4.90e-07!42;UBERON:0004572!4.90e-07!42;UBERON:0002100!7.03e-07!216;UBERON:0004573!8.49e-07!33;UBERON:0004571!8.49e-07!33;UBERON:0002067!8.90e-07!9;UBERON:0004016!8.90e-07!9;UBERON:0010083!8.90e-07!9;UBERON:0000119!9.61e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.95e-11;31!UBERON:0001015;1.95e-11;31!UBERON:0000383;1.95e-11;31!UBERON:0002384;1.78e-10;198!UBERON:0002204;3.36e-10;70!UBERON:0002097;2.75e-09;41!UBERON:0002199;2.83e-09;46!UBERON:0002416;2.83e-09;46!UBERON:0001134;3.44e-09;16!UBERON:0002036;3.44e-09;16!UBERON:0003102;5.66e-09;50!UBERON:0001013;7.97e-08;14!UBERON:0002067;8.79e-08;9!UBERON:0004573;1.21e-07;33!UBERON:0004571;1.21e-07;33!UBERON:0001434;1.81e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,2.21e-25,73;UBERON:0002329,3.09e-25,71;UBERON:0003059,3.09e-25,71;UBERON:0007282,3.09e-25,71;UBERON:0004290,3.09e-25,71;UBERON:0009618,3.09e-25,71;UBERON:0003077,1.44e-24,72;UBERON:0007285,1.44e-24,72;UBERON:0000486,1.21e-21,83;UBERON:0007503,5.88e-21,78;UBERON:0001134,2.35e-19,62;UBERON:0002036,2.35e-19,62;UBERON:0003082,2.35e-19,62;UBERON:0002385,3.55e-18,64;UBERON:0001015,3.55e-18,64;UBERON:0000383,3.55e-18,64;UBERON:0003102,6.71e-16,99;UBERON:0002199,1.84e-14,46;UBERON:0002416,1.84e-14,46;UBERON:0002097,2.09e-12,41;UBERON:0005256,3.46e-10,122;UBERON:0003104,7.96e-10,160;UBERON:0009142,7.96e-10,160;UBERON:0002384,4.08e-09,371;UBERON:0004573,1.76e-08,33;UBERON:0004571,1.76e-08,33;UBERON:0001637,1.84e-08,42;UBERON:0003509,1.84e-08,42;UBERON:0004572,1.84e-08,42;UBERON:0000479,2.78e-08,773;UBERON:0002204,4.91e-08,167;UBERON:0001013,6.84e-08,14;UBERON:0000926,7.85e-08,315;UBERON:0004120,7.85e-08,315;UBERON:0006603,7.85e-08,315;UBERON:0002067,8.40e-08,9;UBERON:0004016,8.40e-08,9;UBERON:0010083,8.40e-08,9;UBERON:0004872,7.58e-07,83 | |||
|phase1_expression=5.99538651592837,4.06790995392868,3.10099689011137,2.00146596706261,1.34088328328186,2.61701557230111,0,7.58063848112197,6.26845507679612,0.245733936501509,0,0,0.263766978228454,8.16857929536308,2.31978163009541,4.70627602516243,4.21886169616784,10.9546513558106,3.90346239032406,0.738726348460727,1.22400414746552,0.313454721478088,1.43117993565528,1.36874425072884,0.627713197974014,1.91033514369878,1.55991119954897,0.944529375764151,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144824403882799,0,4.02420515822182,1.40648818027883,5.78302643815306,8.02140657017423,6.66293987219789,22.2680065174308,7.78615792484217,0.0945348171640679,0,0.263504357079378,0.654895377488563,0,0,0,0,0,0,0,0,0,1.72046919021225,0,0,0.419499436209906,0,0,0,0,0.33472061276467,0,0,0,0,0,0,0,0.225222960966644,0,0,0,0,0,0,4.96971951695318,6.20489507156441,4.8991396900891,3.72887606973458,5.67469411517371,1.68203280042692,0,0.24666754841716,6.22422070799533,0.942974704487816,2.45192854670188,0.605429710579726,1.72852777344,2.81185718200556,12.7985631500431,4.56377457235559,4.48346041655403,6.92863541998213,6.47491777472526,6.74163872170793,19.5988004404698,8.72123652913553,13.8456546775526,20.1960485737949,11.1270118175351,0.910161361938026,0,18.3486364209932,10.509955669245,19.1174239684086,6.58466431321257,6.43624371177941,13.6716633605003,1.36118619792025,6.45802688479903,6.83383644219416,5.29829752898905,3.60109315301283,5.66788910811414,3.86460810068444,3.7223371266318,9.11392194102838,7.3077753870899,4.54380793639406,3.77404584433427,8.89053312503465,7.10019185033229,5.13835700960965,4.57813599238317,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,3.12899064659632,12.2215778256648,11.0507937081984,11.6091982007995,7.94067429836544,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3725424823882,0,0,0,0,3.25808305310325,6.23960871167747,0,0.231860809950154,2.11335649624479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190493682876507,0,0,0,0.308482478109971,0,0,3.81245686774226,2.1798003441664,6.7471222955274,1.55126058909333,10.7296933755565,6.762422020448,3.72313363218819,3.12022310734098,4.37252536245642,0,3.72991050622539,0.142977993658148,1.08524321078289,1.64648067356154,7.49193223875591,0.355391948742546,0,0,0,0,0,0,0,7.42837052023906,6.89171615004683,2.85273810081437,3.61953266668948,6.1642896765115,4.83464600747718,0,0,0,0,0,0,0,0,0,0,0,0,7.60687248658667,6.5022167737758,2.71265023699736,9.56665963041713,8.20773348466944,8.04282316673067,14.8769597040746,3.31040709700491,2.27407504055985,1.03473071292505,5.97803038681893,2.94990669666725,13.0325421702124,1.56640925970192,2.05886054286514,0,0,0,0,0,0.604780586659361,7.69134204238208,18.4154367945675,6.17452207752762,3.20347873139252,7.16390148693385,2.2519548960105,0,9.09837193435668,8.16783936440384,12.5654548701128,8.30807086693794,6.74020195067764,0,0,0,1.49258782613989,2.1850940160806,3.14698595902618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0.328014645699706,0.976135183992909,0.515205058238611,0,0,1.72279661398852,0,0,3.38347514022427,1.84858340537573,3.37708084397485,3.30807773962873,6.87489567156951,5.075584286998,5.45450415463046,4.18450567539666,0,0,0,0,4.64845549297286,7.24068397710472,2.7881490806424,2.7723022215848,1.59691809095107,1.73986598415015,4.26245703939016,1.00187420719394,2.60510858551767,5.06207079549961,0.762520775695299,1.02359116524534,2.56763392820352,4.45484547096312,0,1.61885211824983,1.09814811894422,0.824686816419805,1.01091240786658,1.58510321173008,2.10629228119491,0,2.43713489631284,1.05650146756755,4.09499734223957,0.707027159768564,4.52032466480971,3.85955740482287,2.65375590096488,2.63070531152258,3.47265320560013,7.21484227251296,1.01455188481352,1.239293992399,1.40847801266121,1.72093622644862,1.27723753317057,1.426684205925,6.03093808920016,8.02209014131124,7.57378253807774,4.9331512589543,4.54915136318478,0,2.01090682660736,0,0.376575203107117,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.56731081233197,0,0,0,0,0.296964680832639,0,0,0.844016498463076,0.222617410045812,0,0,1.79323189425963,0,0,0,2.33861130376032,3.11039587661807,0,0,0,2.17015492401254,0,4.44547960578548,0,0.556608588971108,0,0,0,1.44999915086959,0,0,0,0,0,0.347249989866585,0,0.964771509003264,0,0.774054819518572,0.591095237907095,0.219385397153973,0,0,3.92446318369365,0.341826167541004,0,0,0,0,3.38911095586891,0,0,0,0,0,0,0,0,0,0,0,0,6.27527055252064,0,0.442287822516696,1.22206028986725,0,0,0.104421949505455,0.471807930864739,4.81546588379273,0.468528891450678,0,0,0,1.18375320854817,1.20990716048664,0,9.22524062575924,0,0,0,0,0,0,0,17.7503581456817,0,0,0,1.92199335066233,0.171986032471617,0,0,0,1.45483524732629,0,1.58186518546373,0,1.19228767021794,0.443175571691151,0,0.400794101257669,0.85381197895741,0,0,0.114536596165916,0,0,0,0,3.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| ||
|short_description=p7@PRRX1 | |||
}} | }} |
Latest revision as of 14:07, 18 September 2015
Short description: | p7@PRRX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_PRRX1_5end |
Coexpression cluster: | C929_myxofibrosarcoma_Fibroblast_normal_Olfactory_mesenchymal_dura_Preadipocyte |
Association with transcript: | 0bp_to_ENST00000367760_5end |
EntrezGene: | PRRX1 |
HGNC: | 9142 |
UniProt: | P54821 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.51e-28 | 76 |
muscle precursor cell | 1.54e-17 | 58 |
myoblast | 1.54e-17 | 58 |
multi-potent skeletal muscle stem cell | 1.54e-17 | 58 |
multi fate stem cell | 3.03e-16 | 427 |
muscle cell | 5.71e-16 | 55 |
somatic stem cell | 2.81e-15 | 433 |
skin fibroblast | 8.95e-15 | 23 |
stem cell | 4.80e-14 | 441 |
electrically responsive cell | 6.50e-13 | 61 |
electrically active cell | 6.50e-13 | 61 |
smooth muscle cell | 8.80e-12 | 43 |
smooth muscle myoblast | 8.80e-12 | 43 |
vascular associated smooth muscle cell | 1.44e-10 | 32 |
preadipocyte | 3.09e-08 | 12 |
connective tissue cell | 4.32e-08 | 361 |
stromal cell | 5.59e-08 | 28 |
mesenchymal stem cell of adipose | 1.24e-07 | 8 |