FFCP PHASE1:Hg19::chr17:8213539..8213566,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22899 | |EntrezGene=22899 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15590 | |HGNC=15590 | ||
|TSSclassifier=strong | |||
|UniProt=O94989 | |UniProt=O94989 | ||
|association_with_transcript=0bp_to_ENST00000361926,NM_173728_5end | |association_with_transcript=0bp_to_ENST00000361926,NM_173728_5end | ||
|cluster_id=chr17:8213539..8213566,+ | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_1_at_ARHGEF15_5end | |description=CAGE_peak_1_at_ARHGEF15_5end | ||
|id=chr17:8213539..8213566,+ | |id=chr17:8213539..8213566,+ | ||
|ontology_enrichment_celltype=CL:0002139!8.83e-29!24;CL:0000115!1.43e-26!35;CL:0000071!1.61e-22!18;CL:0002546!1.61e-22!18;CL:0002078!5.65e-20!44;CL:1000413!3.07e-12!9;CL:0000213!5.10e-12!57;CL:0000215!5.10e-12!57;CL:0002544!8.49e-09!6;CL:0002543!1.35e-08!6;CL:0005020!8.21e-08!6;CL:0002138!8.21e-08!6;CL:0005022!8.21e-08!6 | |ontology_enrichment_celltype=CL:0002139!8.83e-29!24;CL:0000115!1.43e-26!35;CL:0000071!1.61e-22!18;CL:0002546!1.61e-22!18;CL:0002078!5.65e-20!44;CL:1000413!3.07e-12!9;CL:0000213!5.10e-12!57;CL:0000215!5.10e-12!57;CL:0002544!8.49e-09!6;CL:0002543!1.35e-08!6;CL:0005020!8.21e-08!6;CL:0002138!8.21e-08!6;CL:0005022!8.21e-08!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.11e-35;24!CL:0000115;4.25e-29;36!CL:0000071;2.62e-27;18!CL:0002078;2.91e-16;45!CL:1000413;1.18e-14;9!CL:0000213;2.51e-11;58!CL:0000215;2.51e-11;58!CL:0002544;1.91e-10;6!CL:0002543;3.21e-10;6!CL:0002138;3.03e-09;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.41e-35,24;CL:0000115,2.24e-34,36;CL:0000071,2.70e-27,18;CL:0002546,2.70e-27,18;CL:0002078,3.03e-25,45;CL:0000213,3.41e-17,58;CL:0000215,3.41e-17,58;CL:1000413,1.16e-14,9;CL:0002544,1.93e-10,6;CL:0002543,3.40e-10,6;CL:0005020,3.10e-09,6;CL:0002138,3.10e-09,6;CL:0005022,3.10e-09,6 | |||
|ontology_enrichment_development_v019=CL:0002546;2.62e-27;18!CL:0005022;3.03e-09;6!UBERON:0004872;2.69e-07;7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.19e-60!115;UBERON:0004111!3.22e-29!241;UBERON:0000025!2.44e-26!194;UBERON:0000477!2.14e-25!286;UBERON:0001986!1.61e-22!18;UBERON:0004638!1.61e-22!18;UBERON:0004852!1.61e-22!18;UBERON:0001049!2.82e-20!57;UBERON:0005068!2.82e-20!57;UBERON:0006241!2.82e-20!57;UBERON:0007135!2.82e-20!57;UBERON:0000487!4.20e-17!22;UBERON:0003080!2.98e-16!42;UBERON:0003075!4.86e-16!86;UBERON:0007284!4.86e-16!86;UBERON:0002616!5.85e-16!59;UBERON:0002780!2.23e-15!41;UBERON:0001890!2.23e-15!41;UBERON:0006240!2.23e-15!41;UBERON:0002346!1.13e-14!90;UBERON:0001017!1.44e-14!82;UBERON:0005743!3.08e-14!86;UBERON:0006914!3.26e-14!25;UBERON:0000955!5.72e-14!69;UBERON:0006238!5.72e-14!69;UBERON:0000483!7.00e-14!309;UBERON:0001893!7.64e-14!34;UBERON:0002020!9.65e-14!34;UBERON:0003528!9.65e-14!34;UBERON:0000119!1.84e-13!312;UBERON:0002791!2.82e-13!33;UBERON:0001869!9.12e-13!32;UBERON:0000055!1.01e-12!69;UBERON:0004872!2.29e-12!84;UBERON:0003915!3.07e-12!9;UBERON:0004700!3.07e-12!9;UBERON:0001917!3.07e-12!9;UBERON:0002619!4.09e-12!22;UBERON:0000073!1.28e-11!94;UBERON:0001016!1.28e-11!94;UBERON:0000468!1.73e-11!659;UBERON:0000467!5.22e-11!625;UBERON:0000480!6.45e-11!626;UBERON:0001950!1.22e-10!20;UBERON:0001009!1.52e-10!113;UBERON:0003914!2.35e-10!118;UBERON:0002049!2.88e-10!79;UBERON:0007798!2.88e-10!79;UBERON:0000956!4.68e-10!25;UBERON:0000203!4.68e-10!25;UBERON:0003056!6.68e-10!61;UBERON:0001981!9.45e-10!60;UBERON:0007500!9.45e-10!60;UBERON:0004537!9.45e-10!60;UBERON:0006965!9.45e-10!60;UBERON:0004535!4.50e-09!110;UBERON:0003103!4.68e-09!69;UBERON:0000153!8.10e-09!129;UBERON:0007811!8.10e-09!129;UBERON:0000922!1.53e-08!612;UBERON:0000033!1.11e-07!123;UBERON:0002050!1.41e-07!605;UBERON:0005423!1.41e-07!605;UBERON:0000923!2.99e-07!604;UBERON:0005291!2.99e-07!604;UBERON:0006598!2.99e-07!604;UBERON:0002532!2.99e-07!604;UBERON:0000481!3.47e-07!347;UBERON:0001638!5.92e-07!9;UBERON:0003920!5.92e-07!9;UBERON:0004582!5.92e-07!9;UBERON:0002298!6.70e-07!8;UBERON:0001871!8.02e-07!7;UBERON:0002465!8.38e-07!10 | |ontology_enrichment_uberon=UBERON:0007023!2.19e-60!115;UBERON:0004111!3.22e-29!241;UBERON:0000025!2.44e-26!194;UBERON:0000477!2.14e-25!286;UBERON:0001986!1.61e-22!18;UBERON:0004638!1.61e-22!18;UBERON:0004852!1.61e-22!18;UBERON:0001049!2.82e-20!57;UBERON:0005068!2.82e-20!57;UBERON:0006241!2.82e-20!57;UBERON:0007135!2.82e-20!57;UBERON:0000487!4.20e-17!22;UBERON:0003080!2.98e-16!42;UBERON:0003075!4.86e-16!86;UBERON:0007284!4.86e-16!86;UBERON:0002616!5.85e-16!59;UBERON:0002780!2.23e-15!41;UBERON:0001890!2.23e-15!41;UBERON:0006240!2.23e-15!41;UBERON:0002346!1.13e-14!90;UBERON:0001017!1.44e-14!82;UBERON:0005743!3.08e-14!86;UBERON:0006914!3.26e-14!25;UBERON:0000955!5.72e-14!69;UBERON:0006238!5.72e-14!69;UBERON:0000483!7.00e-14!309;UBERON:0001893!7.64e-14!34;UBERON:0002020!9.65e-14!34;UBERON:0003528!9.65e-14!34;UBERON:0000119!1.84e-13!312;UBERON:0002791!2.82e-13!33;UBERON:0001869!9.12e-13!32;UBERON:0000055!1.01e-12!69;UBERON:0004872!2.29e-12!84;UBERON:0003915!3.07e-12!9;UBERON:0004700!3.07e-12!9;UBERON:0001917!3.07e-12!9;UBERON:0002619!4.09e-12!22;UBERON:0000073!1.28e-11!94;UBERON:0001016!1.28e-11!94;UBERON:0000468!1.73e-11!659;UBERON:0000467!5.22e-11!625;UBERON:0000480!6.45e-11!626;UBERON:0001950!1.22e-10!20;UBERON:0001009!1.52e-10!113;UBERON:0003914!2.35e-10!118;UBERON:0002049!2.88e-10!79;UBERON:0007798!2.88e-10!79;UBERON:0000956!4.68e-10!25;UBERON:0000203!4.68e-10!25;UBERON:0003056!6.68e-10!61;UBERON:0001981!9.45e-10!60;UBERON:0007500!9.45e-10!60;UBERON:0004537!9.45e-10!60;UBERON:0006965!9.45e-10!60;UBERON:0004535!4.50e-09!110;UBERON:0003103!4.68e-09!69;UBERON:0000153!8.10e-09!129;UBERON:0007811!8.10e-09!129;UBERON:0000922!1.53e-08!612;UBERON:0000033!1.11e-07!123;UBERON:0002050!1.41e-07!605;UBERON:0005423!1.41e-07!605;UBERON:0000923!2.99e-07!604;UBERON:0005291!2.99e-07!604;UBERON:0006598!2.99e-07!604;UBERON:0002532!2.99e-07!604;UBERON:0000481!3.47e-07!347;UBERON:0001638!5.92e-07!9;UBERON:0003920!5.92e-07!9;UBERON:0004582!5.92e-07!9;UBERON:0002298!6.70e-07!8;UBERON:0001871!8.02e-07!7;UBERON:0002465!8.38e-07!10 | ||
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|short_description=p1@ARHGEF15 | |short_description=p1@ARHGEF15 | ||
}} | }} |
Latest revision as of 15:22, 18 September 2015
Short description: | p1@ARHGEF15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARHGEF15_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | 0bp_to_ENST00000361926, NM_173728_5end |
EntrezGene: | ARHGEF15 |
HGNC: | 15590 |
UniProt: | O94989 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.41e-35 | 24 |
endothelial cell | 2.24e-34 | 36 |
blood vessel endothelial cell | 2.70e-27 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.70e-27 | 18 |
meso-epithelial cell | 3.03e-25 | 45 |
lining cell | 3.41e-17 | 58 |
barrier cell | 3.41e-17 | 58 |
endothelial cell of artery | 1.16e-14 | 9 |
aortic endothelial cell | 1.93e-10 | 6 |
vein endothelial cell | 3.40e-10 | 6 |
lymphangioblast | 3.10e-09 | 6 |
endothelial cell of lymphatic vessel | 3.10e-09 | 6 |
vascular lymphangioblast | 3.10e-09 | 6 |