FFCP PHASE1:Hg19::chr8:59507206..59507217,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8439 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=88bp_to_ENST00000519174_5end | |||
|cluster_id=chr8:59507206..59507217,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_23_at_NSMAF_5end | |||
|id=chr8:59507206..59507217,- | |||
|ontology_enrichment_celltype=CL:0002057!2.61e-103!42;CL:0000860!6.16e-96!45;CL:0000766!5.59e-85!76;CL:0002194!6.58e-74!63;CL:0000576!6.58e-74!63;CL:0000040!6.58e-74!63;CL:0000559!6.58e-74!63;CL:0002009!1.94e-71!65;CL:0000839!7.13e-66!70;CL:0000557!7.48e-65!71;CL:0000763!2.69e-55!112;CL:0000049!2.69e-55!112;CL:0000738!1.38e-47!140;CL:0002087!1.13e-40!119;CL:0000037!3.16e-37!172;CL:0000566!3.16e-37!172;CL:0002032!4.70e-37!165;CL:0000837!4.70e-37!165;CL:0002031!2.14e-36!124;CL:0000988!9.91e-35!182;CL:0000094!5.95e-19!8;CL:0000134!1.87e-14!358;CL:0002320!5.19e-14!365;CL:0000081!1.25e-13!11;CL:0000219!1.92e-12!390;CL:0000048!2.16e-11!430;CL:0000723!4.11e-11!436;CL:0000034!9.43e-11!444;CL:0000771!5.03e-10!2 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.35e-140;33!CL:0002057;4.35e-140;33!CL:0000473;2.24e-96;39!CL:0000234;2.24e-96;39!CL:0000576;1.14e-63;48!CL:0000766;2.01e-40;69!CL:0000763;6.83e-21;100!CL:0002087;4.45e-17;104!CL:0000771;2.24e-13;2!CL:0000738;2.81e-12;136!CL:0000094;1.90e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.18e-121,42;CL:0002057,9.18e-121,42;CL:0000473,4.66e-105,48;CL:0000234,4.66e-105,48;CL:0002194,4.62e-83,59;CL:0000576,4.62e-83,59;CL:0000040,4.62e-83,59;CL:0000559,4.62e-83,59;CL:0000766,7.49e-83,72;CL:0002009,3.19e-80,61;CL:0000839,7.27e-74,66;CL:0000557,1.05e-72,67;CL:0000763,8.23e-54,108;CL:0000049,8.23e-54,108;CL:0000738,9.29e-42,136;CL:0002087,1.58e-40,115;CL:0002031,1.21e-38,120;CL:0002032,1.65e-34,161;CL:0000837,1.65e-34,161;CL:0000037,7.32e-33,168;CL:0000988,6.20e-31,177;CL:0000771,1.86e-13,2;CL:0000134,8.31e-13,354;CL:0002320,1.88e-12,361;CL:0000219,3.37e-11,386;CL:0000048,1.15e-09,427;CL:0000723,1.88e-09,433;CL:0000034,3.54e-09,441;CL:0000094,1.72e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;3.77e-90;42!CL:0000049;7.94e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.42e-57!80;UBERON:0001474!2.34e-52!86;UBERON:0002390!8.34e-46!102;UBERON:0003061!8.34e-46!102;UBERON:0004765!1.55e-43!101;UBERON:0001434!1.55e-43!101;UBERON:0002193!4.60e-41!112;UBERON:0002405!2.34e-37!115;UBERON:0002204!4.77e-25!167;UBERON:0003081!1.21e-17!216;UBERON:0002384!2.10e-13!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.27e-63,76;UBERON:0001474,1.16e-58,82;UBERON:0004765,4.63e-53,90;UBERON:0002405,3.31e-51,93;UBERON:0002390,2.30e-48,98;UBERON:0003061,2.30e-48,98;UBERON:0001434,2.63e-47,100;UBERON:0002193,1.85e-43,108;UBERON:0002204,2.21e-26,167;UBERON:0003081,8.46e-21,203;UBERON:0002384,5.75e-12,371;UBERON:0000926,1.60e-11,315;UBERON:0004120,1.60e-11,315;UBERON:0006603,1.60e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0.651032612147555,0,0,0,2.18097358169347,2.26725566213286,0.727752183563449,2.55671940596253,6.57868620834921,6.81354015969228,5.17846306179871,4.35473201099471,7.80391358632331,3.10271112662957,8.39130088658974,8.12558919566051,3.57660445130949,3.0019676506363,6.96642801779762,5.20342617030534,6.41858054152187,5.11469700639233,2.96866170168044,2.99195486432448,1.70489900213078,6.67481248845743,9.64554881974938,9.34233373493363,2.26123798731069,4.69334626578181,6.29847649644838,2.42159801053347,18.7821594353658,12.3420331101945,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.9534125230819,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.749007023947182,0,2.90090859405225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p23@NSMAF | |||
}} |
Latest revision as of 15:28, 18 September 2015
Short description: | p23@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_NSMAF_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 88bp_to_ENST00000519174_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.18e-121 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.18e-121 | 42 |
defensive cell | 4.66e-105 | 48 |
phagocyte | 4.66e-105 | 48 |
monopoietic cell | 4.62e-83 | 59 |
monocyte | 4.62e-83 | 59 |
monoblast | 4.62e-83 | 59 |
promonocyte | 4.62e-83 | 59 |
myeloid leukocyte | 7.49e-83 | 72 |
macrophage dendritic cell progenitor | 3.19e-80 | 61 |
myeloid lineage restricted progenitor cell | 7.27e-74 | 66 |
granulocyte monocyte progenitor cell | 1.05e-72 | 67 |
myeloid cell | 8.23e-54 | 108 |
common myeloid progenitor | 8.23e-54 | 108 |
leukocyte | 9.29e-42 | 136 |
nongranular leukocyte | 1.58e-40 | 115 |
hematopoietic lineage restricted progenitor cell | 1.21e-38 | 120 |
hematopoietic oligopotent progenitor cell | 1.65e-34 | 161 |
hematopoietic multipotent progenitor cell | 1.65e-34 | 161 |
hematopoietic stem cell | 7.32e-33 | 168 |
hematopoietic cell | 6.20e-31 | 177 |
eosinophil | 1.86e-13 | 2 |
mesenchymal cell | 8.31e-13 | 354 |
connective tissue cell | 1.88e-12 | 361 |
motile cell | 3.37e-11 | 386 |
multi fate stem cell | 1.15e-09 | 427 |
somatic stem cell | 1.88e-09 | 433 |
stem cell | 3.54e-09 | 441 |
granulocyte | 1.72e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.27e-63 | 76 |
bone element | 1.16e-58 | 82 |
skeletal element | 4.63e-53 | 90 |
immune system | 3.31e-51 | 93 |
hematopoietic system | 2.30e-48 | 98 |
blood island | 2.30e-48 | 98 |
skeletal system | 2.63e-47 | 100 |
hemolymphoid system | 1.85e-43 | 108 |
musculoskeletal system | 2.21e-26 | 167 |
lateral plate mesoderm | 8.46e-21 | 203 |
connective tissue | 5.75e-12 | 371 |
mesoderm | 1.60e-11 | 315 |
mesoderm-derived structure | 1.60e-11 | 315 |
presumptive mesoderm | 1.60e-11 | 315 |