FFCP PHASE1:Hg19::chr8:59507235..59507250,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8439 | |EntrezGene=8439 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8017 | |HGNC=8017 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_ENST00000519174_5end | |association_with_transcript=55bp_to_ENST00000519174_5end | ||
|cluster_id=chr8:59507235..59507250,- | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_12_at_NSMAF_5end | |description=CAGE_peak_12_at_NSMAF_5end | ||
|id=chr8:59507235..59507250,- | |id=chr8:59507235..59507250,- | ||
|ontology_enrichment_celltype=CL:0002057!8.60e-99!42;CL:0000766!2.81e-93!76;CL:0000860!1.33e-91!45;CL:0002194!2.64e-81!63;CL:0000576!2.64e-81!63;CL:0000040!2.64e-81!63;CL:0000559!2.64e-81!63;CL:0002009!1.53e-78!65;CL:0000839!4.73e-76!70;CL:0000557!7.42e-75!71;CL:0000763!3.89e-60!112;CL:0000049!3.89e-60!112;CL:0000738!2.65e-55!140;CL:0002087!7.11e-48!119;CL:0002031!3.05e-43!124;CL:0000037!5.21e-43!172;CL:0000566!5.21e-43!172;CL:0002032!2.66e-41!165;CL:0000837!2.66e-41!165;CL:0000988!4.77e-40!182;CL:0000134!8.07e-16!358;CL:0000094!1.92e-15!8;CL:0002320!2.68e-15!365;CL:0000219!2.69e-14!390;CL:0000034!2.85e-11!444;CL:0000048!2.92e-11!430;CL:0000775!3.02e-11!3;CL:0000081!4.77e-11!11;CL:0000723!5.99e-11!436;CL:0000771!2.58e-08!2;CL:0000063!4.01e-07!578 | |ontology_enrichment_celltype=CL:0002057!8.60e-99!42;CL:0000766!2.81e-93!76;CL:0000860!1.33e-91!45;CL:0002194!2.64e-81!63;CL:0000576!2.64e-81!63;CL:0000040!2.64e-81!63;CL:0000559!2.64e-81!63;CL:0002009!1.53e-78!65;CL:0000839!4.73e-76!70;CL:0000557!7.42e-75!71;CL:0000763!3.89e-60!112;CL:0000049!3.89e-60!112;CL:0000738!2.65e-55!140;CL:0002087!7.11e-48!119;CL:0002031!3.05e-43!124;CL:0000037!5.21e-43!172;CL:0000566!5.21e-43!172;CL:0002032!2.66e-41!165;CL:0000837!2.66e-41!165;CL:0000988!4.77e-40!182;CL:0000134!8.07e-16!358;CL:0000094!1.92e-15!8;CL:0002320!2.68e-15!365;CL:0000219!2.69e-14!390;CL:0000034!2.85e-11!444;CL:0000048!2.92e-11!430;CL:0000775!3.02e-11!3;CL:0000081!4.77e-11!11;CL:0000723!5.99e-11!436;CL:0000771!2.58e-08!2;CL:0000063!4.01e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.36e-131;33!CL:0002057;2.36e-131;33!CL:0000473;1.32e-90;39!CL:0000234;1.32e-90;39!CL:0000576;1.10e-64;48!CL:0000766;1.57e-40;69!CL:0000763;9.62e-22;100!CL:0000094;2.25e-16;8!CL:0000775;3.13e-16;3!CL:0002087;8.28e-16;104!CL:0000738;5.26e-13;136!CL:0000081;7.36e-12;11!CL:0000771;8.12e-12;2!CL:0000219;9.87e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.03e-119,42;CL:0002057,1.03e-119,42;CL:0000473,5.15e-104,48;CL:0000234,5.15e-104,48;CL:0000766,9.47e-91,72;CL:0002194,5.03e-82,59;CL:0000576,5.03e-82,59;CL:0000040,5.03e-82,59;CL:0000559,5.03e-82,59;CL:0002009,3.46e-79,61;CL:0000839,7.84e-73,66;CL:0000557,1.13e-71,67;CL:0000763,1.01e-58,108;CL:0000049,1.01e-58,108;CL:0000738,1.97e-45,136;CL:0002087,1.64e-39,115;CL:0002031,1.26e-37,120;CL:0002032,1.95e-37,161;CL:0000837,1.95e-37,161;CL:0000037,1.27e-35,168;CL:0000988,1.70e-33,177;CL:0000094,2.14e-16,8;CL:0000775,2.89e-16,3;CL:0000134,1.62e-13,354;CL:0002320,3.99e-13,361;CL:0000081,7.10e-12,11;CL:0000771,8.12e-12,2;CL:0000219,9.56e-12,386;CL:0000048,4.69e-10,427;CL:0000723,8.03e-10,433;CL:0000034,1.61e-09,441 | |||
|ontology_enrichment_development_v019=CL:0002057;7.46e-88;42!CL:0000049;4.30e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.99e-65!80;UBERON:0002390!2.15e-60!102;UBERON:0003061!2.15e-60!102;UBERON:0001474!3.18e-60!86;UBERON:0002193!4.06e-54!112;UBERON:0004765!6.78e-50!101;UBERON:0001434!6.78e-50!101;UBERON:0002405!1.15e-42!115;UBERON:0002204!2.27e-26!167;UBERON:0003081!4.00e-23!216;UBERON:0002384!1.38e-14!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.36e-62,76;UBERON:0001474,1.24e-57,82;UBERON:0004765,4.90e-52,90;UBERON:0002405,3.50e-50,93;UBERON:0002390,2.42e-47,98;UBERON:0003061,2.42e-47,98;UBERON:0001434,2.77e-46,100;UBERON:0002193,1.93e-42,108;UBERON:0002204,2.23e-25,167;UBERON:0003081,8.39e-20,203;UBERON:0002384,1.36e-12,371;UBERON:0000926,1.48e-10,315;UBERON:0004120,1.48e-10,315;UBERON:0006603,1.48e-10,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.651032612147555,0,0.32389366601898,0.257575567634187,3.48955773070955,5.66813915533214,2.18325655069035,11.8538808821899,26.3147448333969,28.8026924932446,30.4953935861479,33.5570525553122,40.6749435408367,35.1640594351351,24.5284179761854,33.8566216485854,8.094420600332,15.2827444032394,16.4048143644912,47.7490872098608,71.5671730379689,53.0649814413204,2.96866170168044,9.3747919082167,5.11469700639233,28.1502961469727,43.6886623012178,45.466024176677,16.5824119069451,21.3807996552283,27.5829832775498,25.4267791106015,75.1286377414632,63.9254022630587,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,2.99161459204025,11.189218862773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,1.10799081706375,0.200544447470142,0.651032612147555,0,0.32389366601898,0.257575567634187,3.48955773070955,5.66813915533214,2.18325655069035,11.8538808821899,26.3147448333969,28.8026924932446,30.4953935861479,33.5570525553122,40.6749435408367,35.1640594351351,24.5284179761854,33.8566216485854,8.094420600332,15.2827444032394,16.4048143644912,47.7490872098608,71.5671730379689,53.0649814413204,2.96866170168044,9.3747919082167,5.11469700639233,28.1502961469727,43.6886623012178,45.466024176677,16.5824119069451,21.3807996552283,27.5829832775498,25.4267791106015,75.1286377414632,63.9254022630587,0,0,0.209658645508376,0.112328631146495,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0.476981248610684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.1780417436063,19.3890132074163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234004265139238,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.99602809578873,2.99161459204025,11.189218862773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96618327002975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p12@NSMAF | |short_description=p12@NSMAF | ||
}} | }} |
Latest revision as of 15:28, 18 September 2015
Short description: | p12@NSMAF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_NSMAF_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 55bp_to_ENST00000519174_5end |
EntrezGene: | NSMAF |
HGNC: | 8017 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.03e-119 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.03e-119 | 42 |
defensive cell | 5.15e-104 | 48 |
phagocyte | 5.15e-104 | 48 |
myeloid leukocyte | 9.47e-91 | 72 |
monopoietic cell | 5.03e-82 | 59 |
monocyte | 5.03e-82 | 59 |
monoblast | 5.03e-82 | 59 |
promonocyte | 5.03e-82 | 59 |
macrophage dendritic cell progenitor | 3.46e-79 | 61 |
myeloid lineage restricted progenitor cell | 7.84e-73 | 66 |
granulocyte monocyte progenitor cell | 1.13e-71 | 67 |
myeloid cell | 1.01e-58 | 108 |
common myeloid progenitor | 1.01e-58 | 108 |
leukocyte | 1.97e-45 | 136 |
nongranular leukocyte | 1.64e-39 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-37 | 120 |
hematopoietic oligopotent progenitor cell | 1.95e-37 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-37 | 161 |
hematopoietic stem cell | 1.27e-35 | 168 |
hematopoietic cell | 1.70e-33 | 177 |
granulocyte | 2.14e-16 | 8 |
neutrophil | 2.89e-16 | 3 |
mesenchymal cell | 1.62e-13 | 354 |
connective tissue cell | 3.99e-13 | 361 |
blood cell | 7.10e-12 | 11 |
eosinophil | 8.12e-12 | 2 |
motile cell | 9.56e-12 | 386 |
multi fate stem cell | 4.69e-10 | 427 |
somatic stem cell | 8.03e-10 | 433 |
stem cell | 1.61e-09 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.36e-62 | 76 |
bone element | 1.24e-57 | 82 |
skeletal element | 4.90e-52 | 90 |
immune system | 3.50e-50 | 93 |
hematopoietic system | 2.42e-47 | 98 |
blood island | 2.42e-47 | 98 |
skeletal system | 2.77e-46 | 100 |
hemolymphoid system | 1.93e-42 | 108 |
musculoskeletal system | 2.23e-25 | 167 |
lateral plate mesoderm | 8.39e-20 | 203 |
connective tissue | 1.36e-12 | 371 |
mesoderm | 1.48e-10 | 315 |
mesoderm-derived structure | 1.48e-10 | 315 |
presumptive mesoderm | 1.48e-10 | 315 |