FFCP PHASE1:Hg19::chr17:9923302..9923339,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8522 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4169 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc010vvd.1_5end | |||
|cluster_id=chr17:9923302..9923339,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_18_at_GAS7_5end | |||
|id=chr17:9923302..9923339,- | |||
|ontology_enrichment_celltype=CL:0000766!2.64e-55!76;CL:0002194!7.86e-53!63;CL:0000576!7.86e-53!63;CL:0000040!7.86e-53!63;CL:0000559!7.86e-53!63;CL:0002057!2.29e-52!42;CL:0002009!1.22e-50!65;CL:0000763!1.59e-48!112;CL:0000049!1.59e-48!112;CL:0000860!7.92e-48!45;CL:0000839!1.04e-45!70;CL:0000557!8.34e-45!71;CL:0000738!1.01e-38!140;CL:0000037!3.58e-37!172;CL:0000566!3.58e-37!172;CL:0002032!4.22e-35!165;CL:0000837!4.22e-35!165;CL:0000988!1.15e-33!182;CL:0002087!3.15e-33!119;CL:0002031!2.27e-26!124;CL:0000094!1.08e-08!8;CL:0002393!1.44e-08!9;CL:0002397!1.44e-08!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.24e-80;33!CL:0002057;2.24e-80;33!CL:0000473;2.23e-59;39!CL:0000234;2.23e-59;39!CL:0000576;5.00e-49;48!CL:0000766;2.63e-31;69!CL:0000763;2.30e-23;100!CL:0000738;1.09e-12;136!CL:0000094;5.38e-12;8!CL:0002087;1.15e-11;104!CL:0000988;1.70e-09;177!CL:0000775;2.90e-09;3!CL:0000081;1.55e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.04e-78,72;CL:0000860,6.00e-76,42;CL:0002057,6.00e-76,42;CL:0002194,9.02e-74,59;CL:0000576,9.02e-74,59;CL:0000040,9.02e-74,59;CL:0000559,9.02e-74,59;CL:0002009,5.05e-71,61;CL:0000763,1.89e-70,108;CL:0000049,1.89e-70,108;CL:0000473,2.62e-69,48;CL:0000234,2.62e-69,48;CL:0000839,7.16e-65,66;CL:0000557,9.47e-64,67;CL:0002032,8.58e-47,161;CL:0000837,8.58e-47,161;CL:0000037,4.82e-46,168;CL:0000738,1.10e-43,136;CL:0000988,5.32e-43,177;CL:0002087,1.76e-38,115;CL:0002031,1.29e-34,120;CL:0000134,2.40e-15,354;CL:0002320,8.90e-15,361;CL:0000219,1.67e-13,386;CL:0000094,3.51e-12,8;CL:0000723,1.22e-10,433;CL:0000048,2.41e-10,427;CL:0000034,3.42e-10,441;CL:0000775,1.97e-09,3;CL:0000081,1.15e-08,11 | |||
|ontology_enrichment_development_v019=CL:0002057;2.62e-55;42!CL:0000049;2.36e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.81e-47!102;UBERON:0003061!1.81e-47!102;UBERON:0002193!4.43e-44!112;UBERON:0002371!1.03e-37!80;UBERON:0001474!8.04e-34!86;UBERON:0002405!1.36e-28!115;UBERON:0004765!2.32e-27!101;UBERON:0001434!2.32e-27!101;UBERON:0003081!1.27e-12!216;UBERON:0002204!1.13e-10!167;UBERON:0000178!1.97e-10!15;UBERON:0000179!1.97e-10!15;UBERON:0000463!1.97e-10!15;UBERON:0007023!5.70e-09!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-14;15!UBERON:0000179;1.53e-14;15!UBERON:0000463;1.53e-14;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.05e-63,98;UBERON:0003061,1.05e-63,98;UBERON:0002193,1.16e-56,108;UBERON:0002371,5.72e-55,76;UBERON:0001474,3.56e-50,82;UBERON:0004765,9.05e-45,90;UBERON:0002405,5.57e-43,93;UBERON:0001434,3.20e-39,100;UBERON:0003081,2.96e-24,203;UBERON:0002204,3.44e-19,167;UBERON:0000178,1.61e-14,15;UBERON:0000179,1.61e-14,15;UBERON:0000463,1.61e-14,15;UBERON:0002384,5.30e-14,371;UBERON:0000926,3.05e-11,315;UBERON:0004120,3.05e-11,315;UBERON:0006603,3.05e-11,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0.305653622991805,0.410502947249729,0.236132343941038,2.36018566109342,0.767658796194425,1.85779347979291,0,0,0,0,0,0,0.553995408531877,1.40381113229099,0.868043482863407,0,0.647787332037959,1.03030227053675,5.08893835728477,6.80176698639857,3.88134497900506,5.11343881192506,4.11167888021826,2.47765096716083,22.1523142088056,21.0051779353863,10.6417003449863,3.7922024881028,4.51839278508678,1.35426486594342,5.45902784673554,4.63940455098338,2.02251136000576,4.28517449319264,2.24650318953266,3.19668562899521,25.0686988141904,19.7469021045416,15.344091019177,2.90209238628584,2.26954089876456,2.4912889959823,20.3511418857962,13.5585558789252,6.5156653411535,2.42159801053347,2.94622108790052,1.89877432464531,0.845021145247767,0.637812899895131,1.25795187305026,2.3589012540764,1.95229960693958,3.05378614724452,0.855038231223746,0.39783335439818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0,0,0,1.29818957461873,2.26368658489047,1.32957960518865,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.354920400119532,0.168584690078102,0,0.110293972732394,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0.984868024349589,0,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.51579964002488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,2.99602809578873,2.99161459204025,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03384013061444,0.431428401637234,0.320182673410333,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231046011313244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,7.61171413848254,5.35246044999663,5.12682468456746,5.71756261098694,6.17043409629291,4.53931317834902,7.02040868409549,4.75875105776562,0,0,0,0.371606350251437,0,0,0,0,0,0,0,3.36956613736151,0,6.89391541401302,0,0,10.4382248817405,22.3997674982063,13.6270796060904,0.687010689511529,0.921722292925374,2.01308497103174,3.00328455081435,13.0910023919367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0,0,7.67358555340308,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0,0.219385397153973,0.21787692703798,0,0.0769502585037971,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,2.55436704901932,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.677942222341597,0,0,0.189932387867636,0,0,0,0,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,5.33441992014442,0,0,0,0,0,0,0,0.182248669974074,0,0,0.734364233889974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32506888912221,0.129282956361551,1.05786081394152,0,0,0.213574825135389,0,0.414239055347196,0.496166021811951,0,0,0,0,0,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,1.1593682288866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.691292180758654,1.7537427795545,0.132864840313363,0.163565394255844,0.655219697692825,0,0,0,0.746842107858986,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.622415272177961,0.322951291263702,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.202612753855184,1.56215619722769,0.206686796501184,0.380494861163441,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0,0,0.131545547125698,0,0,0,0.314231179832004,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294450700845729,0,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0.218559560503957,0,0,0,0,0,0,0,0.563903507879121,0.386747327841463,0,0,0,0,0,0,0,0,0.339957450954573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0,0,0,0.124149428591716,0,0,0,0,0,0.202056159043763,0,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p18@GAS7 | |||
}} |
Latest revision as of 17:27, 18 September 2015
Short description: | p18@GAS7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_GAS7_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_uc010vvd.1_5end |
EntrezGene: | GAS7 |
HGNC: | 4169 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 1.04e-78 | 72 |
classical monocyte | 6.00e-76 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.00e-76 | 42 |
monopoietic cell | 9.02e-74 | 59 |
monocyte | 9.02e-74 | 59 |
monoblast | 9.02e-74 | 59 |
promonocyte | 9.02e-74 | 59 |
macrophage dendritic cell progenitor | 5.05e-71 | 61 |
myeloid cell | 1.89e-70 | 108 |
common myeloid progenitor | 1.89e-70 | 108 |
defensive cell | 2.62e-69 | 48 |
phagocyte | 2.62e-69 | 48 |
myeloid lineage restricted progenitor cell | 7.16e-65 | 66 |
granulocyte monocyte progenitor cell | 9.47e-64 | 67 |
hematopoietic oligopotent progenitor cell | 8.58e-47 | 161 |
hematopoietic multipotent progenitor cell | 8.58e-47 | 161 |
hematopoietic stem cell | 4.82e-46 | 168 |
leukocyte | 1.10e-43 | 136 |
hematopoietic cell | 5.32e-43 | 177 |
nongranular leukocyte | 1.76e-38 | 115 |
hematopoietic lineage restricted progenitor cell | 1.29e-34 | 120 |
mesenchymal cell | 2.40e-15 | 354 |
connective tissue cell | 8.90e-15 | 361 |
motile cell | 1.67e-13 | 386 |
granulocyte | 3.51e-12 | 8 |
somatic stem cell | 1.22e-10 | 433 |
multi fate stem cell | 2.41e-10 | 427 |
stem cell | 3.42e-10 | 441 |
neutrophil | 1.97e-09 | 3 |
blood cell | 1.15e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.05e-63 | 98 |
blood island | 1.05e-63 | 98 |
hemolymphoid system | 1.16e-56 | 108 |
bone marrow | 5.72e-55 | 76 |
bone element | 3.56e-50 | 82 |
skeletal element | 9.05e-45 | 90 |
immune system | 5.57e-43 | 93 |
skeletal system | 3.20e-39 | 100 |
lateral plate mesoderm | 2.96e-24 | 203 |
musculoskeletal system | 3.44e-19 | 167 |
blood | 1.61e-14 | 15 |
haemolymphatic fluid | 1.61e-14 | 15 |
organism substance | 1.61e-14 | 15 |
connective tissue | 5.30e-14 | 371 |
mesoderm | 3.05e-11 | 315 |
mesoderm-derived structure | 3.05e-11 | 315 |
presumptive mesoderm | 3.05e-11 | 315 |