FFCP PHASE1:Hg19::chr2:85921522..85921536,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10578 | |EntrezGene=10578 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4414 | |HGNC=4414 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-12bp_to_ENST00000409696,ENST00000534351_5end | |association_with_transcript=-12bp_to_ENST00000409696,ENST00000534351_5end | ||
|cluster_id=chr2:85921522..85921536,+ | |||
|coexpression_cluster_id=C8 | |||
|description=CAGE_peak_3_at_GNLY_5end | |description=CAGE_peak_3_at_GNLY_5end | ||
|id=chr2:85921522..85921536,+ | |id=chr2:85921522..85921536,+ | ||
|ontology_enrichment_celltype=CL:0000738!4.49e-42!140;CL:0002087!1.02e-35!119;CL:0002031!4.26e-32!124;CL:0000037!7.59e-32!172;CL:0000566!7.59e-32!172;CL:0002032!9.83e-29!165;CL:0000837!9.83e-29!165;CL:0000988!3.24e-28!182;CL:0000766!1.11e-26!76;CL:0002057!3.10e-26!42;CL:0000860!1.68e-23!45;CL:0002194!1.83e-22!63;CL:0000576!1.83e-22!63;CL:0000040!1.83e-22!63;CL:0000559!1.83e-22!63;CL:0000839!1.06e-21!70;CL:0002009!2.92e-21!65;CL:0000557!3.78e-21!71;CL:0000763!3.03e-17!112;CL:0000049!3.03e-17!112;CL:0000791!4.76e-16!18;CL:0000789!4.76e-16!18;CL:0002420!4.76e-16!18;CL:0002419!4.76e-16!18;CL:0000790!4.76e-16!18;CL:0000084!2.42e-14!25;CL:0000827!2.42e-14!25;CL:0000625!4.16e-13!11;CL:0000838!2.39e-11!52;CL:0000542!6.16e-11!53;CL:0000051!6.16e-11!53 | |ontology_enrichment_celltype=CL:0000738!4.49e-42!140;CL:0002087!1.02e-35!119;CL:0002031!4.26e-32!124;CL:0000037!7.59e-32!172;CL:0000566!7.59e-32!172;CL:0002032!9.83e-29!165;CL:0000837!9.83e-29!165;CL:0000988!3.24e-28!182;CL:0000766!1.11e-26!76;CL:0002057!3.10e-26!42;CL:0000860!1.68e-23!45;CL:0002194!1.83e-22!63;CL:0000576!1.83e-22!63;CL:0000040!1.83e-22!63;CL:0000559!1.83e-22!63;CL:0000839!1.06e-21!70;CL:0002009!2.92e-21!65;CL:0000557!3.78e-21!71;CL:0000763!3.03e-17!112;CL:0000049!3.03e-17!112;CL:0000791!4.76e-16!18;CL:0000789!4.76e-16!18;CL:0002420!4.76e-16!18;CL:0002419!4.76e-16!18;CL:0000790!4.76e-16!18;CL:0000084!2.42e-14!25;CL:0000827!2.42e-14!25;CL:0000625!4.16e-13!11;CL:0000838!2.39e-11!52;CL:0000542!6.16e-11!53;CL:0000051!6.16e-11!53 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.12e-25;33!CL:0002057;4.12e-25;33!CL:0000791;8.81e-22;18!CL:0000789;8.81e-22;18!CL:0002419;8.81e-22;18!CL:0000084;1.49e-20;25!CL:0000625;3.02e-19;11!CL:0000576;1.07e-17;48!CL:0000473;4.90e-17;39!CL:0000234;4.90e-17;39!CL:0002087;7.63e-16;104!CL:0000766;9.80e-13;69!CL:0000738;3.53e-09;136!CL:0000542;9.88e-09;53!CL:0000094;1.22e-07;8!CL:0000623;8.25e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,4.07e-44,136;CL:0002087,9.26e-40,115;CL:0002031,1.19e-33,120;CL:0000037,1.59e-31,168;CL:0000988,8.00e-29,177;CL:0002032,3.25e-27,161;CL:0000837,3.25e-27,161;CL:0000860,2.32e-26,42;CL:0002057,2.32e-26,42;CL:0000766,1.29e-25,72;CL:0000791,7.34e-22,18;CL:0000789,7.34e-22,18;CL:0002420,7.34e-22,18;CL:0002419,7.34e-22,18;CL:0000790,7.34e-22,18;CL:0000473,7.35e-22,48;CL:0000234,7.35e-22,48;CL:0002194,3.01e-21,59;CL:0000576,3.01e-21,59;CL:0000040,3.01e-21,59;CL:0000559,3.01e-21,59;CL:0000084,1.25e-20,25;CL:0000827,1.25e-20,25;CL:0002009,3.20e-20,61;CL:0000625,3.03e-19,11;CL:0000839,3.92e-19,66;CL:0000557,1.07e-18,67;CL:0000838,5.25e-15,52;CL:0000542,1.43e-14,53;CL:0000051,1.43e-14,53;CL:0000763,4.28e-13,108;CL:0000049,4.28e-13,108;CL:0000134,4.18e-09,354;CL:0002320,1.50e-08,361;CL:0000094,1.31e-07,8;CL:0000623,8.26e-07,3;CL:0000825,8.26e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000790;8.81e-22;18!CL:0002057;4.36e-20;42!CL:0000051;9.88e-09;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.99e-28!102;UBERON:0003061!4.99e-28!102;UBERON:0002193!2.28e-25!112;UBERON:0007023!2.44e-21!115;UBERON:0002371!7.26e-17!80;UBERON:0001474!3.08e-15!86;UBERON:0002405!5.13e-14!115;UBERON:0004765!9.50e-13!101;UBERON:0001434!9.50e-13!101;UBERON:0000178!3.80e-10!15;UBERON:0000179!3.80e-10!15;UBERON:0000463!3.80e-10!15;UBERON:0003081!2.15e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!4.99e-28!102;UBERON:0003061!4.99e-28!102;UBERON:0002193!2.28e-25!112;UBERON:0007023!2.44e-21!115;UBERON:0002371!7.26e-17!80;UBERON:0001474!3.08e-15!86;UBERON:0002405!5.13e-14!115;UBERON:0004765!9.50e-13!101;UBERON:0001434!9.50e-13!101;UBERON:0000178!3.80e-10!15;UBERON:0000179!3.80e-10!15;UBERON:0000463!3.80e-10!15;UBERON:0003081!2.15e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.53e-15;15!UBERON:0000179;1.53e-15;15!UBERON:0000463;1.53e-15;15!UBERON:0002390;2.39e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.04e-28,98;UBERON:0003061,1.04e-28,98;UBERON:0002193,6.57e-27,108;UBERON:0002405,3.15e-16,93;UBERON:0000178,1.53e-15,15;UBERON:0000179,1.53e-15,15;UBERON:0000463,1.53e-15,15;UBERON:0002371,2.73e-15,76;UBERON:0001474,1.87e-13,82;UBERON:0004765,2.06e-11,90;UBERON:0001434,6.13e-11,100;UBERON:0003081,1.75e-10,203;UBERON:0002384,3.25e-08,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0.0787107813136792,156.558982185864,330.093282363603,273.250457652874,0,0,0,0,0,0,85.869288322441,80.8194123304671,211.802609818671,2.68698569087909,11.3362783106643,2.83333124397605,3.48955773070955,3.77875943688809,0.727752183563449,4.64858073811369,4.93401465626191,2.78735733805593,4.02769349251011,2.81776777182011,0.709446689665756,6.20542225325913,3.87290810150296,4.06279459783025,6.02375486536335,4.36649840092553,1.34834090667051,9.79468455586888,8.66508373105453,3.19668562899521,3.29851300186716,2.59302754908121,2.55734850319616,6.38460324982885,5.10646702222026,2.4912889959823,4.52247597462138,5.21482918420201,2.82345498116652,1.21079900526674,8.83866326370155,2.53169909952708,0.211255286311942,0.637812899895131,0.209658645508376,0.22465726229299,0,0,0.285012743741249,0.79566670879636,0,0,0.546138611262131,0,1.28019066769952,0,0,0,0,1.70763890732835,5.87237189370939,3.82273228125229,0,82.9552673212673,0,2.9506465517075,12.1833336452241,10.485676448975,0,0,0,0,21.5022181788385,0.589211814949674,0.664601683750863,0.270803863765016,0.768547918354051,1.69077151827842,3.4531959966772,2.76350017785848,0.579606171470105,0,0.267540828089713,1.04535523804977,6.00539516297101,2.68254345521345,6.52892146416997,23.2778116657943,36.6350226472711,48.180175585375,57.0271226669025,120.30952014314,98.2937173665933,118.684190224729,96.6051188339589,142.055143467341,326.602924024067,248.451941882878,180.016734026319,0,0,0,0,0,0,0,0,0,0,2.72287835648691,7.00738053912763,0,0,0,0.174129737299267,0.398873881556595,15.5018905798472,30.8877251821269,21.5445350771148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4492584410489,15.511210565933,0,0,0,0,0,6.02936249737207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18800285728205,1.23633464639278,0,0,0,0,0,0,0,4.05642759047811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237270619111097,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.297262324577456,0,0,0,0,0,0,0,0,0.829312462163088,0.432359860250884,1.64115163454294,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.61642896765115,0,3.81089489577993,953.037787096722,613.891705625046,1108.37046131191,0,0,0,0,0,0,0,2.48649308061621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,89.3237872850873,141.077087335375,291.2595052456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.57602529119306,0,0.165018999841176,0,0,0,0,0,0,0.137836572484531,0,0.145016693914229,3.49429172406014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.350115893586,0,0,0,0,0,4.22215270595328,0,0,0,0,5.3624182042863,0,2.82431402330337,0,0,0,0,45.6702848308952,37.4672231499764,45.0021277867588,65.9902018018076,67.874775059222,33.0721388708286,49.6828922259066,66.6225148087187,0,0,0,0,0,0,0,0,0,0,0,0.280797178113459,0,0,0,0,0,0,0,0.343505344755765,0,0.223676107892416,0.166849141711909,0,0,0,0,0,0,0,2.05111450980652,0,10.1413479692505,0,0,5.93929361665277,0,0,0,0,0,0.211125408127993,1.39473591775749,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,182.007150183674,0,0.969332746095218,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0.538651809526579,0,0,0,0,14.6740533476683,0.183195186803725,11.72676507241,0,0,0.332423363800313,0,0,0,0,0.317873157960757,0,0,0,0,0,0.796118080530053,0.611030144933625,0,0,0,0.134802265961354,1.60515529459758,0,0,0,0,0,1.20990716048664,0,4.23350083510869,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0,0,0,0,1.84279131327997,0,0.225980740780532,0,0,0.379864775735272,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57732412567589,0.558564802544508,0.458320848023367,0,0.199679000498991,0,2.00854311697685,0.134366944973453,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.262272940674991,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,1.32506888912221,0.258565912723101,0.13223260174269,0,0,7.58190629230632,0,3.72815149812476,1.48849806543585,0.592834895693833,0,0,1.08803560673895,1.5041393641362,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0.620964029413834,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276516872303462,0.584580926518165,0.797189041880179,0.163565394255844,0,0,0,131.191731680834,0,0,0,0,0,7.46492712039567,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256916900385838,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.0675375846183947,0,0,0.634158101939068,0,0,0.992422356778588,0,0,0,0,0,0,14.8132958171607,0.115233987555779,0,0.339848664884159,0.131545547125698,0,0,1.25588948560822,0,0,0,0,0,2.00134323694638,0,0,0,0,0,0,0,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0.647428837187895,1.95059333026869,0,0,0,0,0,0,0,0,3.78153374728929,1.09279780251979,0,0,0,0.1963084671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| ||
|short_description=p3@GNLY | |short_description=p3@GNLY | ||
}} | }} |
Latest revision as of 17:48, 18 September 2015
Short description: | p3@GNLY |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_GNLY_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | -12bp_to_ENST00000409696, ENST00000534351_5end |
EntrezGene: | GNLY |
HGNC: | 4414 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.04e-28 | 98 |
blood island | 1.04e-28 | 98 |
hemolymphoid system | 6.57e-27 | 108 |
immune system | 3.15e-16 | 93 |
blood | 1.53e-15 | 15 |
haemolymphatic fluid | 1.53e-15 | 15 |
organism substance | 1.53e-15 | 15 |
bone marrow | 2.73e-15 | 76 |
bone element | 1.87e-13 | 82 |
skeletal element | 2.06e-11 | 90 |
skeletal system | 6.13e-11 | 100 |
lateral plate mesoderm | 1.75e-10 | 203 |
connective tissue | 3.25e-08 | 371 |