FFCP PHASE1:Hg19::chr6:41196736..41196751,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285852 | |EntrezGene=285852 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30807 | |HGNC=30807 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=284bp_to_uc003oqd.2_5end | |association_with_transcript=284bp_to_uc003oqd.2_5end | ||
|cluster_id=chr6:41196736..41196751,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_1_at_TREML4_5end | |description=CAGE_peak_1_at_TREML4_5end | ||
|id=chr6:41196736..41196751,+ | |id=chr6:41196736..41196751,+ | ||
|ontology_enrichment_celltype=CL:0002057!8.07e-100!42;CL:0000860!1.83e-92!45;CL:0000766!2.21e-79!76;CL:0002194!9.45e-69!63;CL:0000576!9.45e-69!63;CL:0000040!9.45e-69!63;CL:0000559!9.45e-69!63;CL:0002009!2.44e-66!65;CL:0000839!4.42e-64!70;CL:0000557!6.60e-60!71;CL:0000763!1.43e-52!112;CL:0000049!1.43e-52!112;CL:0000738!8.93e-46!140;CL:0002087!2.04e-39!119;CL:0000037!1.35e-36!172;CL:0000566!1.35e-36!172;CL:0000988!6.72e-34!182;CL:0002032!1.89e-33!165;CL:0000837!1.89e-33!165;CL:0002031!2.04e-33!124;CL:0000094!1.25e-18!8;CL:0000134!1.09e-16!358;CL:0002320!4.12e-16!365;CL:0000219!4.54e-14!390;CL:0000081!3.05e-13!11;CL:0000034!5.26e-13!444;CL:0000723!1.03e-12!436;CL:0000048!2.33e-12!430;CL:0000767!1.08e-09!3;CL:0000842!1.38e-09!3;CL:0002393!5.07e-08!9;CL:0002397!5.07e-08!9;CL:0000063!7.41e-08!578;CL:0000771!8.13e-08!2;CL:0000224!2.75e-07!4 | |ontology_enrichment_celltype=CL:0002057!8.07e-100!42;CL:0000860!1.83e-92!45;CL:0000766!2.21e-79!76;CL:0002194!9.45e-69!63;CL:0000576!9.45e-69!63;CL:0000040!9.45e-69!63;CL:0000559!9.45e-69!63;CL:0002009!2.44e-66!65;CL:0000839!4.42e-64!70;CL:0000557!6.60e-60!71;CL:0000763!1.43e-52!112;CL:0000049!1.43e-52!112;CL:0000738!8.93e-46!140;CL:0002087!2.04e-39!119;CL:0000037!1.35e-36!172;CL:0000566!1.35e-36!172;CL:0000988!6.72e-34!182;CL:0002032!1.89e-33!165;CL:0000837!1.89e-33!165;CL:0002031!2.04e-33!124;CL:0000094!1.25e-18!8;CL:0000134!1.09e-16!358;CL:0002320!4.12e-16!365;CL:0000219!4.54e-14!390;CL:0000081!3.05e-13!11;CL:0000034!5.26e-13!444;CL:0000723!1.03e-12!436;CL:0000048!2.33e-12!430;CL:0000767!1.08e-09!3;CL:0000842!1.38e-09!3;CL:0002393!5.07e-08!9;CL:0002397!5.07e-08!9;CL:0000063!7.41e-08!578;CL:0000771!8.13e-08!2;CL:0000224!2.75e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.96e-107;33!CL:0002057;5.96e-107;33!CL:0000473;2.15e-73;39!CL:0000234;2.15e-73;39!CL:0000576;1.49e-58;48!CL:0000766;1.71e-44;69!CL:0000094;2.32e-28;8!CL:0000763;5.93e-21;100!CL:0000081;2.17e-20;11!CL:0002087;2.46e-17;104!CL:0000767;3.37e-14;3!CL:0000738;5.21e-13;136!CL:0000771;2.59e-11;2!CL:0002393;1.69e-07;6!CL:0002397;1.69e-07;6!CL:0000775;2.57e-07;3!CL:0000988;3.60e-07;177!CL:0000226;4.33e-07;3!CL:0000842;4.33e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,6.15e-112,42;CL:0002057,6.15e-112,42;CL:0000473,4.21e-97,48;CL:0000234,4.21e-97,48;CL:0000766,9.09e-94,72;CL:0002194,2.51e-76,59;CL:0000576,2.51e-76,59;CL:0000040,2.51e-76,59;CL:0000559,2.51e-76,59;CL:0002009,1.21e-73,61;CL:0000839,1.22e-67,66;CL:0000557,1.52e-66,67;CL:0000763,2.28e-60,108;CL:0000049,2.28e-60,108;CL:0000738,5.72e-52,136;CL:0002087,2.48e-41,115;CL:0000037,1.06e-40,168;CL:0000988,2.91e-38,177;CL:0002032,3.55e-38,161;CL:0000837,3.55e-38,161;CL:0002031,2.18e-34,120;CL:0000094,2.00e-28,8;CL:0000081,1.95e-20,11;CL:0000134,2.49e-15,354;CL:0002320,7.00e-15,361;CL:0000767,3.14e-14,3;CL:0000219,2.67e-13,386;CL:0000034,1.28e-11,441;CL:0000048,2.32e-11,427;CL:0000771,2.59e-11,2;CL:0000723,4.29e-11,433;CL:0000775,2.41e-07,3;CL:0000226,4.54e-07,3;CL:0000842,4.54e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;9.51e-83;42!CL:0000049;8.37e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!4.77e-52!80;UBERON:0002390!6.82e-48!102;UBERON:0003061!6.82e-48!102;UBERON:0001474!1.03e-47!86;UBERON:0002193!1.23e-42!112;UBERON:0004765!4.08e-39!101;UBERON:0001434!4.08e-39!101;UBERON:0002405!6.18e-35!115;UBERON:0002204!7.62e-21!167;UBERON:0003081!8.58e-17!216;UBERON:0002384!2.54e-15!375 | |ontology_enrichment_uberon=UBERON:0002371!4.77e-52!80;UBERON:0002390!6.82e-48!102;UBERON:0003061!6.82e-48!102;UBERON:0001474!1.03e-47!86;UBERON:0002193!1.23e-42!112;UBERON:0004765!4.08e-39!101;UBERON:0001434!4.08e-39!101;UBERON:0002405!6.18e-35!115;UBERON:0002204!7.62e-21!167;UBERON:0003081!8.58e-17!216;UBERON:0002384!2.54e-15!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.72e-58,76;UBERON:0001474,2.78e-53,82;UBERON:0002390,1.19e-49,98;UBERON:0003061,1.19e-49,98;UBERON:0004765,5.38e-48,90;UBERON:0002405,3.03e-46,93;UBERON:0002193,1.92e-44,108;UBERON:0001434,1.46e-42,100;UBERON:0002204,7.89e-23,167;UBERON:0003081,2.07e-20,203;UBERON:0002384,2.87e-14,371;UBERON:0000926,1.29e-10,315;UBERON:0004120,1.29e-10,315;UBERON:0006603,1.29e-10,315 | |||
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| ||
|short_description=p1@TREML4 | |short_description=p1@TREML4 | ||
}} | }} |
Latest revision as of 18:24, 18 September 2015
Short description: | p1@TREML4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TREML4_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 284bp_to_uc003oqd.2_5end |
EntrezGene: | TREML4 |
HGNC: | 30807 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.72e-58 | 76 |
bone element | 2.78e-53 | 82 |
hematopoietic system | 1.19e-49 | 98 |
blood island | 1.19e-49 | 98 |
skeletal element | 5.38e-48 | 90 |
immune system | 3.03e-46 | 93 |
hemolymphoid system | 1.92e-44 | 108 |
skeletal system | 1.46e-42 | 100 |
musculoskeletal system | 7.89e-23 | 167 |
lateral plate mesoderm | 2.07e-20 | 203 |
connective tissue | 2.87e-14 | 371 |
mesoderm | 1.29e-10 | 315 |
mesoderm-derived structure | 1.29e-10 | 315 |
presumptive mesoderm | 1.29e-10 | 315 |