FFCP PHASE1:Hg19::chr10:65028938..65028989,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221037 | |EntrezGene=221037 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12313 | |HGNC=12313 | ||
|TSSclassifier=strong | |||
|UniProt=Q15652 | |UniProt=Q15652 | ||
|association_with_transcript=0bp_to_ENST00000402544,NM_004241,uc001jml.2,uc001jmm.2,uc001jmp.1,uc009xpj.1,uc010qiq.1_5end | |association_with_transcript=0bp_to_ENST00000402544,NM_004241,uc001jml.2,uc001jmm.2,uc001jmp.1,uc009xpj.1,uc010qiq.1_5end | ||
|cluster_id=chr10:65028938..65028989,- | |||
|coexpression_cluster_id=C175 | |coexpression_cluster_id=C175 | ||
|description=CAGE_peak_1_at_JMJD1C_5end | |description=CAGE_peak_1_at_JMJD1C_5end | ||
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|ontology_enrichment_celltype=CL:0000738!5.16e-45!140;CL:0000037!1.52e-43!172;CL:0000566!1.52e-43!172;CL:0002032!2.42e-40!165;CL:0000837!2.42e-40!165;CL:0000988!7.16e-38!182;CL:0002031!4.62e-37!124;CL:0002087!2.41e-35!119;CL:0000766!3.08e-27!76;CL:0000763!8.26e-26!112;CL:0000049!8.26e-26!112;CL:0002057!3.16e-25!42;CL:0000557!1.36e-23!71;CL:0000839!5.41e-23!70;CL:0000860!1.02e-22!45;CL:0002009!1.55e-21!65;CL:0002194!1.53e-20!63;CL:0000576!1.53e-20!63;CL:0000040!1.53e-20!63;CL:0000559!1.53e-20!63;CL:0000542!5.67e-13!53;CL:0000051!5.67e-13!53;CL:0000838!1.11e-12!52;CL:0000134!1.17e-09!358;CL:0002320!2.68e-09!365;CL:0000945!4.36e-08!24;CL:0000826!4.36e-08!24;CL:0000236!1.83e-07!14;CL:0000219!5.39e-07!390;CL:0000791!8.14e-07!18;CL:0000789!8.14e-07!18;CL:0002420!8.14e-07!18;CL:0002419!8.14e-07!18;CL:0000790!8.14e-07!18;CL:0000094!9.29e-07!8 | |ontology_enrichment_celltype=CL:0000738!5.16e-45!140;CL:0000037!1.52e-43!172;CL:0000566!1.52e-43!172;CL:0002032!2.42e-40!165;CL:0000837!2.42e-40!165;CL:0000988!7.16e-38!182;CL:0002031!4.62e-37!124;CL:0002087!2.41e-35!119;CL:0000766!3.08e-27!76;CL:0000763!8.26e-26!112;CL:0000049!8.26e-26!112;CL:0002057!3.16e-25!42;CL:0000557!1.36e-23!71;CL:0000839!5.41e-23!70;CL:0000860!1.02e-22!45;CL:0002009!1.55e-21!65;CL:0002194!1.53e-20!63;CL:0000576!1.53e-20!63;CL:0000040!1.53e-20!63;CL:0000559!1.53e-20!63;CL:0000542!5.67e-13!53;CL:0000051!5.67e-13!53;CL:0000838!1.11e-12!52;CL:0000134!1.17e-09!358;CL:0002320!2.68e-09!365;CL:0000945!4.36e-08!24;CL:0000826!4.36e-08!24;CL:0000236!1.83e-07!14;CL:0000219!5.39e-07!390;CL:0000791!8.14e-07!18;CL:0000789!8.14e-07!18;CL:0002420!8.14e-07!18;CL:0002419!8.14e-07!18;CL:0000790!8.14e-07!18;CL:0000094!9.29e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.01e-18;33!CL:0002057;1.01e-18;33!CL:0000576;1.53e-17;48!CL:0000473;3.90e-15;39!CL:0000234;3.90e-15;39!CL:0000766;2.26e-14;69!CL:0002087;9.93e-13;104!CL:0000738;7.26e-10;136!CL:0000763;3.54e-09;100!CL:0000945;4.37e-08;24!CL:0000542;4.90e-08;53!CL:0000988;2.43e-07;177!CL:0000236;3.06e-07;13!CL:0000791;8.83e-07;18!CL:0000789;8.83e-07;18!CL:0002419;8.83e-07;18!CL:0000094;9.22e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;1.01e-18;33!CL:0002057;1.01e-18;33!CL:0000576;1.53e-17;48!CL:0000473;3.90e-15;39!CL:0000234;3.90e-15;39!CL:0000766;2.26e-14;69!CL:0002087;9.93e-13;104!CL:0000738;7.26e-10;136!CL:0000763;3.54e-09;100!CL:0000945;4.37e-08;24!CL:0000542;4.90e-08;53!CL:0000988;2.43e-07;177!CL:0000236;3.06e-07;13!CL:0000791;8.83e-07;18!CL:0000789;8.83e-07;18!CL:0002419;8.83e-07;18!CL:0000094;9.22e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.38e-47,136;CL:0000037,1.09e-45,168;CL:0002032,1.93e-42,161;CL:0000837,1.93e-42,161;CL:0000988,2.19e-40,177;CL:0002031,1.63e-39,120;CL:0002087,8.64e-38,115;CL:0000766,4.32e-30,72;CL:0000763,7.60e-28,108;CL:0000049,7.60e-28,108;CL:0000557,2.73e-26,67;CL:0000839,1.14e-25,66;CL:0000860,3.16e-25,42;CL:0002057,3.16e-25,42;CL:0002009,3.12e-24,61;CL:0000473,3.72e-24,48;CL:0000234,3.72e-24,48;CL:0002194,3.31e-23,59;CL:0000576,3.31e-23,59;CL:0000040,3.31e-23,59;CL:0000559,3.31e-23,59;CL:0000542,5.67e-13,53;CL:0000051,5.67e-13,53;CL:0000838,1.11e-12,52;CL:0000134,3.71e-10,354;CL:0002320,8.80e-10,361;CL:0000945,4.36e-08,24;CL:0000826,4.36e-08,24;CL:0000236,1.83e-07,14;CL:0000219,2.17e-07,386;CL:0000791,8.14e-07,18;CL:0000789,8.14e-07,18;CL:0002420,8.14e-07,18;CL:0002419,8.14e-07,18;CL:0000790,8.14e-07,18;CL:0000094,9.29e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;2.45e-18;42!CL:0000049;2.25e-08;108!CL:0000051;4.90e-08;53!CL:0000790;8.83e-07;18 | |ontology_enrichment_development_v019=CL:0002057;2.45e-18;42!CL:0000049;2.25e-08;108!CL:0000051;4.90e-08;53!CL:0000790;8.83e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.44e-26!102;UBERON:0003061!3.44e-26!102;UBERON:0002193!1.17e-24!112;UBERON:0002371!5.74e-20!80;UBERON:0001474!5.65e-18!86;UBERON:0002405!1.67e-16!115;UBERON:0004765!8.86e-13!101;UBERON:0001434!8.86e-13!101;UBERON:0002384!2.13e-08!375 | |ontology_enrichment_uberon=UBERON:0002390!3.44e-26!102;UBERON:0003061!3.44e-26!102;UBERON:0002193!1.17e-24!112;UBERON:0002371!5.74e-20!80;UBERON:0001474!5.65e-18!86;UBERON:0002405!1.67e-16!115;UBERON:0004765!8.86e-13!101;UBERON:0001434!8.86e-13!101;UBERON:0002384!2.13e-08!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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| ||
|short_description=p1@JMJD1C | |short_description=p1@JMJD1C | ||
}} | }} |
Latest revision as of 20:33, 18 September 2015
Short description: | p1@JMJD1C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_JMJD1C_5end |
Coexpression cluster: | C175_Eosinophils_Neutrophils_CD4_Basophils_CD19_CD8_Natural |
Association with transcript: | 0bp_to_ENST00000402544, NM_004241, uc001jml.2, uc001jmm.2, uc001jmp.1, uc009xpj.1, uc010qiq.1_5end |
EntrezGene: | JMJD1C |
HGNC: | 12313 |
UniProt: | Q15652 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.14e-28 | 98 |
blood island | 2.14e-28 | 98 |
hemolymphoid system | 1.29e-26 | 108 |
bone marrow | 3.89e-22 | 76 |
immune system | 1.23e-21 | 93 |
bone element | 7.12e-20 | 82 |
skeletal element | 1.75e-18 | 90 |
skeletal system | 6.40e-14 | 100 |
connective tissue | 7.57e-09 | 371 |