FFCP PHASE1:Hg19::chr8:67579418..67579498,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr8:67579418..67579498,-
|short_description=p1@VCPIP1
|description=CAGE_peak_1_at_VCPIP1_5end
|association_with_transcript=0bp_to_ENST00000310421,NM_025054,uc0...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=80124 | |EntrezGene=80124 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30897 | |HGNC=30897 | ||
|TSSclassifier=strong | |||
|UniProt=Q96JH7 | |UniProt=Q96JH7 | ||
|association_with_transcript=0bp_to_ENST00000310421,NM_025054,uc003xwn.2_5end | |||
|cluster_id=chr8:67579418..67579498,- | |||
|description=CAGE_peak_1_at_VCPIP1_5end | |||
|id=chr8:67579418..67579498,- | |||
|ontology_enrichment_celltype=CL:0000791!7.80e-07!18;CL:0000789!7.80e-07!18;CL:0002420!7.80e-07!18;CL:0002419!7.80e-07!18;CL:0000790!7.80e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000791;7.42e-07;18!CL:0000789;7.42e-07;18!CL:0002419;7.42e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,7.80e-07,18;CL:0000789,7.80e-07,18;CL:0002420,7.80e-07,18;CL:0002419,7.80e-07,18;CL:0000790,7.80e-07,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.63e-07;82!CL:0000790;7.42e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.26e-42!115;UBERON:0001049!2.54e-21!57;UBERON:0005068!2.54e-21!57;UBERON:0006241!2.54e-21!57;UBERON:0007135!2.54e-21!57;UBERON:0003080!5.66e-19!42;UBERON:0002780!5.88e-19!41;UBERON:0001890!5.88e-19!41;UBERON:0006240!5.88e-19!41;UBERON:0002616!6.19e-19!59;UBERON:0000955!1.69e-18!69;UBERON:0006238!1.69e-18!69;UBERON:0001017!2.76e-18!82;UBERON:0005743!1.28e-16!86;UBERON:0002020!4.35e-16!34;UBERON:0003528!4.35e-16!34;UBERON:0001893!6.45e-16!34;UBERON:0002791!2.67e-15!33;UBERON:0001869!5.90e-15!32;UBERON:0000073!7.64e-15!94;UBERON:0001016!7.64e-15!94;UBERON:0002619!7.77e-13!22;UBERON:0003075!1.29e-12!86;UBERON:0007284!1.29e-12!86;UBERON:0002346!1.88e-12!90;UBERON:0001950!2.70e-12!20;UBERON:0000153!2.89e-12!129;UBERON:0007811!2.89e-12!129;UBERON:0000956!1.02e-11!25;UBERON:0000203!1.02e-11!25;UBERON:0000033!2.60e-11!123;UBERON:0000924!2.30e-10!173;UBERON:0006601!2.30e-10!173;UBERON:0004121!2.46e-10!169;UBERON:0003056!6.22e-10!61 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;3.30e-14;41!UBERON:0001890;3.30e-14;41!UBERON:0001893;6.33e-14;34!UBERON:0003528;7.43e-14;34!UBERON:0002020;7.43e-14;34!UBERON:0001869;9.26e-14;32!UBERON:0002791;9.99e-14;32!UBERON:0002619;7.28e-13;22!UBERON:0001950;2.82e-12;20!UBERON:0000073;3.79e-12;53!UBERON:0002616;3.79e-12;53!UBERON:0007023;5.80e-12;114!UBERON:0000956;6.99e-12;25!UBERON:0000203;6.99e-12;25!UBERON:0000955;5.56e-09;68!UBERON:0001017;1.00e-08;75!UBERON:0001016;8.61e-08;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.68e-42,114;UBERON:0001049,2.88e-21,56;UBERON:0005068,2.88e-21,56;UBERON:0006241,2.88e-21,56;UBERON:0007135,2.88e-21,56;UBERON:0000073,3.66e-20,53;UBERON:0002616,3.66e-20,53;UBERON:0002780,5.87e-19,41;UBERON:0001890,5.87e-19,41;UBERON:0003080,5.87e-19,41;UBERON:0006240,5.87e-19,41;UBERON:0000955,2.11e-18,68;UBERON:0006238,2.11e-18,68;UBERON:0001017,3.55e-18,81;UBERON:0001016,3.76e-16,89;UBERON:0003528,4.35e-16,34;UBERON:0002020,4.35e-16,34;UBERON:0001893,6.45e-16,34;UBERON:0001869,5.90e-15,32;UBERON:0002791,6.86e-15,32;UBERON:0002619,7.77e-13,22;UBERON:0001950,2.70e-12,20;UBERON:0003075,4.79e-12,82;UBERON:0007284,4.79e-12,82;UBERON:0002346,7.02e-12,86;UBERON:0000956,1.02e-11,25;UBERON:0000203,1.02e-11,25;UBERON:0010314,7.73e-11,132;UBERON:0010371,3.00e-10,104;UBERON:0003056,3.02e-10,61;UBERON:0011216,4.98e-10,223;UBERON:0004121,5.32e-10,171;UBERON:0000924,5.32e-10,171;UBERON:0006601,5.32e-10,171 | |||
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| ||
|short_description=p1@VCPIP1 | |||
}} | }} |
Latest revision as of 21:33, 18 September 2015
Short description: | p1@VCPIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_VCPIP1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000310421, NM_025054, uc003xwn.2_5end |
EntrezGene: | VCPIP1 |
HGNC: | 30897 |
UniProt: | Q96JH7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 7.80e-07 | 18 |
alpha-beta T cell | 7.80e-07 | 18 |
immature T cell | 7.80e-07 | 18 |
mature T cell | 7.80e-07 | 18 |
immature alpha-beta T cell | 7.80e-07 | 18 |