FFCP PHASE1:Hg19::chr19:48216669..48216685,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30846 | |EntrezGene=30846 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3243 | |HGNC=3243 | ||
|TSSclassifier=strong | |||
|UniProt=B4DE23,B4DNU6,F5GXL2,F5H559 | |UniProt=B4DE23,B4DNU6,F5GXL2,F5H559 | ||
|association_with_transcript=0bp_to_ENST00000454483,ENST00000538399,ENST00000539439,ENST00000540364_5end | |association_with_transcript=0bp_to_ENST00000454483,ENST00000538399,ENST00000539439,ENST00000540364_5end | ||
|cluster_id=chr19:48216669..48216685,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_EHD2_5end | |description=CAGE_peak_1_at_EHD2_5end | ||
|id=chr19:48216669..48216685,+ | |id=chr19:48216669..48216685,+ | ||
|ontology_enrichment_celltype=CL:0000055!7.73e-31!180;CL:0000222!5.67e-24!119;CL:0000057!1.19e-19!75;CL:0000183!9.79e-19!59;CL:0000220!6.65e-18!246;CL:0002321!1.91e-17!248;CL:0000680!1.39e-16!57;CL:0000056!1.39e-16!57;CL:0000355!1.39e-16!57;CL:0000187!3.12e-16!54;CL:0000192!1.84e-15!42;CL:0000514!1.84e-15!42;CL:0000393!4.42e-13!60;CL:0000211!4.42e-13!60;CL:0002371!3.25e-12!591;CL:0000359!1.67e-11!32;CL:0000144!1.44e-10!625;CL:0000136!2.92e-09!15;CL:0002078!2.23e-08!44;CL:0000213!3.47e-08!57;CL:0000215!3.47e-08!57;CL:0000115!4.50e-08!35;CL:0000548!1.20e-07!679;CL:0000004!1.20e-07!679;CL:0000255!1.20e-07!679;CL:0000012!2.73e-07!682;CL:0002139!3.54e-07!24;CL:0002620!6.73e-07!23 | |ontology_enrichment_celltype=CL:0000055!7.73e-31!180;CL:0000222!5.67e-24!119;CL:0000057!1.19e-19!75;CL:0000183!9.79e-19!59;CL:0000220!6.65e-18!246;CL:0002321!1.91e-17!248;CL:0000680!1.39e-16!57;CL:0000056!1.39e-16!57;CL:0000355!1.39e-16!57;CL:0000187!3.12e-16!54;CL:0000192!1.84e-15!42;CL:0000514!1.84e-15!42;CL:0000393!4.42e-13!60;CL:0000211!4.42e-13!60;CL:0002371!3.25e-12!591;CL:0000359!1.67e-11!32;CL:0000144!1.44e-10!625;CL:0000136!2.92e-09!15;CL:0002078!2.23e-08!44;CL:0000213!3.47e-08!57;CL:0000215!3.47e-08!57;CL:0000115!4.50e-08!35;CL:0000548!1.20e-07!679;CL:0000004!1.20e-07!679;CL:0000255!1.20e-07!679;CL:0000012!2.73e-07!682;CL:0002139!3.54e-07!24;CL:0002620!6.73e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0000192;5.27e-12;43!CL:0000359;4.53e-11;32!CL:0000187;1.86e-09;55!CL:0000057;2.40e-08;73!CL:0000136;3.13e-08;13!CL:0000393;1.82e-07;61!CL:0000211;1.82e-07;61!CL:0002139;3.33e-07;24!CL:0000115;3.71e-07;36!CL:0002320;5.54e-07;188!CL:0002620;6.21e-07;23!CL:0000134;8.49e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.09e-25,121;CL:0000057,6.54e-20,76;CL:0002321,2.06e-18,250;CL:0000680,3.20e-17,58;CL:0000056,3.20e-17,58;CL:0000355,3.20e-17,58;CL:0000187,7.21e-17,55;CL:0000192,4.12e-16,43;CL:0000514,4.12e-16,43;CL:0000393,1.19e-13,61;CL:0000211,1.19e-13,61;CL:0000359,1.47e-11,32;CL:0000136,2.65e-09,15;CL:0002078,7.63e-09,45;CL:0000115,1.47e-08,36;CL:0000213,1.59e-08,58;CL:0000215,1.59e-08,58;CL:0002139,3.30e-07,24;CL:0002620,6.29e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.27e-12;43!CL:0000355;2.75e-09;58!CL:0000222;1.77e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.93e-22!79;UBERON:0007798!4.93e-22!79;UBERON:0004872!8.48e-21!84;UBERON:0005256!1.13e-20!143;UBERON:0000914!2.14e-20!83;UBERON:0002329!2.14e-20!83;UBERON:0003077!2.14e-20!83;UBERON:0003059!2.14e-20!83;UBERON:0007282!2.14e-20!83;UBERON:0009618!2.14e-20!83;UBERON:0007285!2.14e-20!83;UBERON:0000475!2.14e-19!365;UBERON:0000486!4.37e-19!82;UBERON:0000055!4.51e-19!69;UBERON:0002100!7.40e-19!216;UBERON:0004290!3.24e-18!70;UBERON:0001981!4.86e-18!60;UBERON:0007500!4.86e-18!60;UBERON:0004537!4.86e-18!60;UBERON:0006965!4.86e-18!60;UBERON:0003914!5.77e-18!118;UBERON:0001134!2.60e-16!61;UBERON:0002036!2.60e-16!61;UBERON:0003082!2.60e-16!61;UBERON:0000119!4.08e-16!312;UBERON:0002385!4.26e-16!63;UBERON:0001015!4.26e-16!63;UBERON:0000383!4.26e-16!63;UBERON:0000483!1.31e-15!309;UBERON:0000490!1.69e-15!138;UBERON:0000481!1.99e-14!347;UBERON:0001637!3.05e-14!42;UBERON:0003509!3.05e-14!42;UBERON:0004572!3.05e-14!42;UBERON:0004535!4.65e-14!110;UBERON:0001009!5.03e-14!113;UBERON:0003104!5.71e-14!238;UBERON:0009142!5.71e-14!238;UBERON:0000468!6.64e-14!659;UBERON:0000477!2.17e-13!286;UBERON:0003102!2.70e-13!95;UBERON:0004573!1.83e-11!33;UBERON:0004571!1.83e-11!33;UBERON:0000467!3.76e-11!625;UBERON:0004111!3.92e-11!241;UBERON:0000480!7.21e-11!626;UBERON:0002199!1.17e-08!45;UBERON:0002416!1.17e-08!45;UBERON:0000926!1.51e-07!448;UBERON:0004120!1.51e-07!448;UBERON:0006603!1.51e-07!448;UBERON:0000025!2.17e-07!194;UBERON:0002097!3.10e-07!40;UBERON:0000947!5.12e-07!21;UBERON:0010191!5.12e-07!21;UBERON:0002050!5.37e-07!605;UBERON:0005423!5.37e-07!605;UBERON:0000923!6.59e-07!604;UBERON:0005291!6.59e-07!604;UBERON:0006598!6.59e-07!604;UBERON:0002532!6.59e-07!604;UBERON:0001013!6.73e-07!14;UBERON:0003103!8.54e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.43e-10;42!UBERON:0003509;1.43e-10;42!UBERON:0004572;1.43e-10;42!UBERON:0007500;1.44e-10;56!UBERON:0001981;1.44e-10;56!UBERON:0004537;1.44e-10;56!UBERON:0004573;1.61e-10;33!UBERON:0004571;1.61e-10;33!UBERON:0000055;1.10e-09;65!UBERON:0002049;7.19e-09;75!UBERON:0007798;7.19e-09;75!UBERON:0003914;7.23e-09;74!UBERON:0002384;2.86e-07;198!UBERON:0000947;4.82e-07;21!UBERON:0010191;4.82e-07;21!UBERON:0001013;6.21e-07;14!UBERON:0003102;8.57e-07;50 | |||
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| ||
|short_description=p1@EHD2 | |short_description=p1@EHD2 | ||
}} | }} |
Latest revision as of 00:28, 19 September 2015
Short description: | p1@EHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EHD2_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000454483, ENST00000538399, ENST00000539439, ENST00000540364_5end |
EntrezGene: | EHD2 |
HGNC: | 3243 |
UniProt: | B4DE23B4DNU6F5GXL2F5H559 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.09e-25 | 121 |
fibroblast | 6.54e-20 | 76 |
embryonic cell | 2.06e-18 | 250 |
muscle precursor cell | 3.20e-17 | 58 |
myoblast | 3.20e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.20e-17 | 58 |
muscle cell | 7.21e-17 | 55 |
smooth muscle cell | 4.12e-16 | 43 |
smooth muscle myoblast | 4.12e-16 | 43 |
electrically responsive cell | 1.19e-13 | 61 |
electrically active cell | 1.19e-13 | 61 |
vascular associated smooth muscle cell | 1.47e-11 | 32 |
fat cell | 2.65e-09 | 15 |
meso-epithelial cell | 7.63e-09 | 45 |
endothelial cell | 1.47e-08 | 36 |
lining cell | 1.59e-08 | 58 |
barrier cell | 1.59e-08 | 58 |
endothelial cell of vascular tree | 3.30e-07 | 24 |
skin fibroblast | 6.29e-07 | 23 |