FFCP PHASE1:Hg19::chr19:48216669..48216685,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=30846 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3243 | |||
|TSSclassifier=strong | |||
|UniProt=B4DE23,B4DNU6,F5GXL2,F5H559 | |||
|association_with_transcript=0bp_to_ENST00000454483,ENST00000538399,ENST00000539439,ENST00000540364_5end | |||
|cluster_id=chr19:48216669..48216685,+ | |||
|coexpression_cluster_id=C345 | |||
|description=CAGE_peak_1_at_EHD2_5end | |||
|id=chr19:48216669..48216685,+ | |||
|ontology_enrichment_celltype=CL:0000055!7.73e-31!180;CL:0000222!5.67e-24!119;CL:0000057!1.19e-19!75;CL:0000183!9.79e-19!59;CL:0000220!6.65e-18!246;CL:0002321!1.91e-17!248;CL:0000680!1.39e-16!57;CL:0000056!1.39e-16!57;CL:0000355!1.39e-16!57;CL:0000187!3.12e-16!54;CL:0000192!1.84e-15!42;CL:0000514!1.84e-15!42;CL:0000393!4.42e-13!60;CL:0000211!4.42e-13!60;CL:0002371!3.25e-12!591;CL:0000359!1.67e-11!32;CL:0000144!1.44e-10!625;CL:0000136!2.92e-09!15;CL:0002078!2.23e-08!44;CL:0000213!3.47e-08!57;CL:0000215!3.47e-08!57;CL:0000115!4.50e-08!35;CL:0000548!1.20e-07!679;CL:0000004!1.20e-07!679;CL:0000255!1.20e-07!679;CL:0000012!2.73e-07!682;CL:0002139!3.54e-07!24;CL:0002620!6.73e-07!23 | |||
|ontology_enrichment_celltype_v019=CL:0000192;5.27e-12;43!CL:0000359;4.53e-11;32!CL:0000187;1.86e-09;55!CL:0000057;2.40e-08;73!CL:0000136;3.13e-08;13!CL:0000393;1.82e-07;61!CL:0000211;1.82e-07;61!CL:0002139;3.33e-07;24!CL:0000115;3.71e-07;36!CL:0002320;5.54e-07;188!CL:0002620;6.21e-07;23!CL:0000134;8.49e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,5.09e-25,121;CL:0000057,6.54e-20,76;CL:0002321,2.06e-18,250;CL:0000680,3.20e-17,58;CL:0000056,3.20e-17,58;CL:0000355,3.20e-17,58;CL:0000187,7.21e-17,55;CL:0000192,4.12e-16,43;CL:0000514,4.12e-16,43;CL:0000393,1.19e-13,61;CL:0000211,1.19e-13,61;CL:0000359,1.47e-11,32;CL:0000136,2.65e-09,15;CL:0002078,7.63e-09,45;CL:0000115,1.47e-08,36;CL:0000213,1.59e-08,58;CL:0000215,1.59e-08,58;CL:0002139,3.30e-07,24;CL:0002620,6.29e-07,23 | |||
|ontology_enrichment_development_v019=CL:0000514;5.27e-12;43!CL:0000355;2.75e-09;58!CL:0000222;1.77e-07;121 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!4.93e-22!79;UBERON:0007798!4.93e-22!79;UBERON:0004872!8.48e-21!84;UBERON:0005256!1.13e-20!143;UBERON:0000914!2.14e-20!83;UBERON:0002329!2.14e-20!83;UBERON:0003077!2.14e-20!83;UBERON:0003059!2.14e-20!83;UBERON:0007282!2.14e-20!83;UBERON:0009618!2.14e-20!83;UBERON:0007285!2.14e-20!83;UBERON:0000475!2.14e-19!365;UBERON:0000486!4.37e-19!82;UBERON:0000055!4.51e-19!69;UBERON:0002100!7.40e-19!216;UBERON:0004290!3.24e-18!70;UBERON:0001981!4.86e-18!60;UBERON:0007500!4.86e-18!60;UBERON:0004537!4.86e-18!60;UBERON:0006965!4.86e-18!60;UBERON:0003914!5.77e-18!118;UBERON:0001134!2.60e-16!61;UBERON:0002036!2.60e-16!61;UBERON:0003082!2.60e-16!61;UBERON:0000119!4.08e-16!312;UBERON:0002385!4.26e-16!63;UBERON:0001015!4.26e-16!63;UBERON:0000383!4.26e-16!63;UBERON:0000483!1.31e-15!309;UBERON:0000490!1.69e-15!138;UBERON:0000481!1.99e-14!347;UBERON:0001637!3.05e-14!42;UBERON:0003509!3.05e-14!42;UBERON:0004572!3.05e-14!42;UBERON:0004535!4.65e-14!110;UBERON:0001009!5.03e-14!113;UBERON:0003104!5.71e-14!238;UBERON:0009142!5.71e-14!238;UBERON:0000468!6.64e-14!659;UBERON:0000477!2.17e-13!286;UBERON:0003102!2.70e-13!95;UBERON:0004573!1.83e-11!33;UBERON:0004571!1.83e-11!33;UBERON:0000467!3.76e-11!625;UBERON:0004111!3.92e-11!241;UBERON:0000480!7.21e-11!626;UBERON:0002199!1.17e-08!45;UBERON:0002416!1.17e-08!45;UBERON:0000926!1.51e-07!448;UBERON:0004120!1.51e-07!448;UBERON:0006603!1.51e-07!448;UBERON:0000025!2.17e-07!194;UBERON:0002097!3.10e-07!40;UBERON:0000947!5.12e-07!21;UBERON:0010191!5.12e-07!21;UBERON:0002050!5.37e-07!605;UBERON:0005423!5.37e-07!605;UBERON:0000923!6.59e-07!604;UBERON:0005291!6.59e-07!604;UBERON:0006598!6.59e-07!604;UBERON:0002532!6.59e-07!604;UBERON:0001013!6.73e-07!14;UBERON:0003103!8.54e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;1.43e-10;42!UBERON:0003509;1.43e-10;42!UBERON:0004572;1.43e-10;42!UBERON:0007500;1.44e-10;56!UBERON:0001981;1.44e-10;56!UBERON:0004537;1.44e-10;56!UBERON:0004573;1.61e-10;33!UBERON:0004571;1.61e-10;33!UBERON:0000055;1.10e-09;65!UBERON:0002049;7.19e-09;75!UBERON:0007798;7.19e-09;75!UBERON:0003914;7.23e-09;74!UBERON:0002384;2.86e-07;198!UBERON:0000947;4.82e-07;21!UBERON:0010191;4.82e-07;21!UBERON:0001013;6.21e-07;14!UBERON:0003102;8.57e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002049,7.44e-22,78;UBERON:0007798,7.44e-22,78;UBERON:0007503,7.82e-22,78;UBERON:0004872,1.19e-20,83;UBERON:0000486,1.01e-19,83;UBERON:0000055,6.36e-19,68;UBERON:0002329,7.43e-19,71;UBERON:0003059,7.43e-19,71;UBERON:0007282,7.43e-19,71;UBERON:0004290,7.43e-19,71;UBERON:0009618,7.43e-19,71;UBERON:0007524,1.50e-18,73;UBERON:0003077,2.16e-18,72;UBERON:0007285,2.16e-18,72;UBERON:0003104,2.93e-18,160;UBERON:0009142,2.93e-18,160;UBERON:0000490,6.17e-18,148;UBERON:0007500,7.53e-18,59;UBERON:0001981,7.53e-18,59;UBERON:0004537,7.53e-18,59;UBERON:0006965,7.53e-18,59;UBERON:0003914,1.39e-17,117;UBERON:0005256,1.42e-17,122;UBERON:0001134,6.17e-17,62;UBERON:0002036,6.17e-17,62;UBERON:0003082,6.17e-17,62;UBERON:0002385,1.03e-16,64;UBERON:0001015,1.03e-16,64;UBERON:0000383,1.03e-16,64;UBERON:0000119,1.59e-16,309;UBERON:0002100,1.99e-16,199;UBERON:0000483,5.20e-16,306;UBERON:0001637,2.60e-14,42;UBERON:0003509,2.60e-14,42;UBERON:0004572,2.60e-14,42;UBERON:0004535,6.26e-14,109;UBERON:0001009,6.77e-14,112;UBERON:0003102,7.47e-14,99;UBERON:0004573,1.61e-11,33;UBERON:0004571,1.61e-11,33;UBERON:0004111,1.00e-10,240;UBERON:0002199,3.86e-09,46;UBERON:0002416,3.86e-09,46;UBERON:0002097,1.08e-07,41;UBERON:0004923,3.42e-07,66;UBERON:0000947,4.78e-07,21;UBERON:0010191,4.78e-07,21;UBERON:0000025,5.78e-07,192;UBERON:0001013,6.29e-07,14 | |||
|phase1_expression=350.820950371445,371.250308426965,323.067494187966,393.288062527803,354.887108975267,293.978082621824,286.228862330191,260.268587851854,529.423268361073,196.341415264706,490.554221084617,135.215209348577,207.584611865793,336.396947345407,456.996981128796,172.115237491654,183.219136519289,213.250546393113,172.240277973049,96.1575463579714,239.088810138265,136.666258564446,24.0438229190088,57.89788180583,65.5332578684871,0,0.0821005894499457,0,0.393364276848904,0,3.56077083626975,202.272669385364,297.892653671689,258.458053106585,0,0,2.05520307534393,5.53995408531877,0,0.217010870715852,0,0,0,1.74477886535478,2.26725566213286,1.4555043671269,1.39457422143411,3.28934310417461,2.47765096716083,1.1507695692886,1.7931249457037,0.709446689665756,0.689491361473237,0,1.35426486594342,0.752969358170419,1.36453075028923,0.674170453335254,0,0.641858054152187,0,0.329851300186716,0.199463657621632,0.426224750532694,0.290209238628584,0.56738522469114,0.622822248995575,0.502497330513487,1.0429658368404,0.65156653411535,7.87019353423379,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,7.93027971474155,2.80254281490768,6.05783394982677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,236.492660324543,104.629334113767,254.190772944938,251.200210907274,432.153278968137,328.222211965227,71.5757352345989,232.61146800466,38.1920661342834,80.9312300738358,68.7746371977177,61.1672282574318,322.037034850607,205.785365745358,0,0,0.26591592103773,0,0.571994910780128,0,262.565140131417,270.973897458429,247.164037144607,255.519189749652,244.148671874165,268.790326975446,276.082350795127,265.910845185239,217.37318650158,224.262810552329,288.425791050149,269.136325424353,555.241180922086,208.097303475762,237.371590729356,171.455478305433,153.353561503674,154.728174184085,260.638283692001,348.380497061503,231.200600840174,0,0,292.183014935498,316.074161278223,189.565875961876,282.296373493782,240.655924808255,218.475723434188,271.928636069019,342.664276292353,275.280984033551,205.399283363846,134.306540053479,152.18303179863,407.151480364866,267.345628958719,160.275859374317,221.321494472697,244.161939621024,232.243249577499,101.228537830925,122.375945942307,118.400030049995,259.479951664969,165.826328370887,368.356409891604,283.932682890411,345.184633272865,980.243786807255,1069.30379502256,125.915413237642,169.785831466255,254.898986245448,209.831302781041,259.59516304177,298.072308870688,111.503836046301,330.435708938884,217.401421817302,235.032478385954,277.284172781988,227.643037087712,523.525577372718,292.761815009591,250.801629710522,257.526004641048,438.225032087783,271.915400589352,255.400769773723,318.79861407992,232.233586414711,228.228557249916,137.215205745941,129.827153401237,133.937746046665,7.31842236777572,9.40961355082545,11.0384245726042,12.8539708219059,8.07426722802011,11.3142981313507,219.029345261742,398.809381679589,378.489684505797,294.873634300307,310.408177117922,59.6266272200813,62.3763353288976,46.7561397973955,65.9557956939716,69.9393015536624,42.4714408208863,56.2246555027886,55.7268960955983,43.4764287349421,386.055302768691,392.676966649648,351.895779688347,645.368242982529,2.53510069643662,2.94848165003288,16.5421173870793,0,15.127577940803,129.362128965088,285.89949348947,333.83320717513,104.349073363273,184.899124981584,217.965756252607,408.694370614874,79.3822381139003,31.7649309631711,130.558467990234,122.422747701391,115.746378144153,137.744006217849,7.11183958163348,7.72637545885385,0.246217006087397,0,0.148631162288728,126.540675882149,176.7171988652,94.4222147634294,91.8870442931223,102.884414233943,346.577941965351,0,0.088048434013226,4.14656231081544,4.4677185559258,9.59442494040488,32.320428194714,117.65243507195,116.045272737947,225.815628749971,53.5731236984316,87.0994867747361,35.7283040788223,262.72313062118,132.531860925317,154.523768224742,147.628299395382,2696.72960172319,205.408568871108,272.586569499492,321.382980056121,216.311401754461,268.094859523996,294.130085633774,296.39338085334,481.30536398221,211.572766552658,144.301129642125,267.254745454394,79.1951872933429,122.987265840311,104.584015032035,136.263186981144,0,0,0,276.766708092778,536.405240345312,62.7602382179161,180.687070721139,218.421330871058,135.728210135841,0,0,0,0,41.9256129967065,15.6167824629146,8.50617694055465,7.53823194004569,10.8449587781038,0,0,0,435.922870078104,366.124821415684,259.329362656947,343.359892387363,321.172179834891,330.544261911127,345.567174228504,455.933341087494,234.229729177664,184.182066900659,213.216417129875,275.447537801305,236.236547738717,975.089764164448,492.410813168578,0,0,0.106727557803444,258.870946015106,279.611538377635,358.030107302341,367.19955557179,535.889210721914,370.75198474609,405.688546543549,315.723372674156,332.324201082693,443.770018670523,172.869066752777,215.027249354197,171.070865976764,181.739050214267,233.815281461438,10.1521937656963,206.32115794208,122.559796273678,231.351113051683,265.6710141218,3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| |||
|short_description=p1@EHD2 | |||
}} |
Latest revision as of 00:28, 19 September 2015
Short description: | p1@EHD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_EHD2_5end |
Coexpression cluster: | C345_Mesenchymal_Fibroblast_Alveolar_Renal_Pericytes_Hepatic_Smooth |
Association with transcript: | 0bp_to_ENST00000454483, ENST00000538399, ENST00000539439, ENST00000540364_5end |
EntrezGene: | EHD2 |
HGNC: | 3243 |
UniProt: | B4DE23B4DNU6F5GXL2F5H559 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 5.09e-25 | 121 |
fibroblast | 6.54e-20 | 76 |
embryonic cell | 2.06e-18 | 250 |
muscle precursor cell | 3.20e-17 | 58 |
myoblast | 3.20e-17 | 58 |
multi-potent skeletal muscle stem cell | 3.20e-17 | 58 |
muscle cell | 7.21e-17 | 55 |
smooth muscle cell | 4.12e-16 | 43 |
smooth muscle myoblast | 4.12e-16 | 43 |
electrically responsive cell | 1.19e-13 | 61 |
electrically active cell | 1.19e-13 | 61 |
vascular associated smooth muscle cell | 1.47e-11 | 32 |
fat cell | 2.65e-09 | 15 |
meso-epithelial cell | 7.63e-09 | 45 |
endothelial cell | 1.47e-08 | 36 |
lining cell | 1.59e-08 | 58 |
barrier cell | 1.59e-08 | 58 |
endothelial cell of vascular tree | 3.30e-07 | 24 |
skin fibroblast | 6.29e-07 | 23 |