FFCP PHASE1:Hg19::chr7:55606346..55606366,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81552 | |EntrezGene=81552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34518 | |HGNC=34518 | ||
|TSSclassifier=strong | |||
|UniProt=B0AZU1 | |UniProt=B0AZU1 | ||
|association_with_transcript=0bp_to_ENST00000545390,uc010kzh.2_5end | |association_with_transcript=0bp_to_ENST00000545390,uc010kzh.2_5end | ||
|cluster_id=chr7:55606346..55606366,- | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_3_at_VOPP1_5end | |description=CAGE_peak_3_at_VOPP1_5end | ||
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|ontology_enrichment_celltype=CL:0002009!5.17e-46!65;CL:0002194!1.15e-43!63;CL:0000576!1.15e-43!63;CL:0000040!1.15e-43!63;CL:0000559!1.15e-43!63;CL:0000557!1.98e-43!71;CL:0000766!1.76e-42!76;CL:0000839!2.82e-40!70;CL:0002057!3.45e-37!42;CL:0000738!3.85e-36!140;CL:0000860!1.05e-33!45;CL:0002087!4.58e-32!119;CL:0002031!1.16e-29!124;CL:0000763!3.76e-28!112;CL:0000049!3.76e-28!112;CL:0000988!1.79e-24!182;CL:0000037!1.88e-24!172;CL:0000566!1.88e-24!172;CL:0002032!1.29e-23!165;CL:0000837!1.29e-23!165;CL:0000990!7.68e-09!8;CL:0000134!1.90e-08!358;CL:0002320!8.11e-08!365;CL:0000219!1.38e-07!390;CL:0000080!2.16e-07!6;CL:0000451!7.51e-07!10 | |ontology_enrichment_celltype=CL:0002009!5.17e-46!65;CL:0002194!1.15e-43!63;CL:0000576!1.15e-43!63;CL:0000040!1.15e-43!63;CL:0000559!1.15e-43!63;CL:0000557!1.98e-43!71;CL:0000766!1.76e-42!76;CL:0000839!2.82e-40!70;CL:0002057!3.45e-37!42;CL:0000738!3.85e-36!140;CL:0000860!1.05e-33!45;CL:0002087!4.58e-32!119;CL:0002031!1.16e-29!124;CL:0000763!3.76e-28!112;CL:0000049!3.76e-28!112;CL:0000988!1.79e-24!182;CL:0000037!1.88e-24!172;CL:0000566!1.88e-24!172;CL:0002032!1.29e-23!165;CL:0000837!1.29e-23!165;CL:0000990!7.68e-09!8;CL:0000134!1.90e-08!358;CL:0002320!8.11e-08!365;CL:0000219!1.38e-07!390;CL:0000080!2.16e-07!6;CL:0000451!7.51e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.06e-78;33!CL:0002057;1.06e-78;33!CL:0000473;4.97e-75;39!CL:0000234;4.97e-75;39!CL:0000576;1.78e-53;48!CL:0000766;1.28e-34;69!CL:0000763;8.74e-16;100!CL:0002087;7.57e-15;104!CL:0000738;1.87e-14;136!CL:0000840;4.92e-14;5!CL:0000235;1.74e-13;6!CL:0000990;8.15e-13;8!CL:0000451;2.35e-10;10!CL:0002619;6.68e-10;3!CL:0000988;3.12e-08;177!CL:0001014;1.41e-07;2!CL:0001016;1.41e-07;2 | |ontology_enrichment_celltype_v019=CL:0000860;1.06e-78;33!CL:0002057;1.06e-78;33!CL:0000473;4.97e-75;39!CL:0000234;4.97e-75;39!CL:0000576;1.78e-53;48!CL:0000766;1.28e-34;69!CL:0000763;8.74e-16;100!CL:0002087;7.57e-15;104!CL:0000738;1.87e-14;136!CL:0000840;4.92e-14;5!CL:0000235;1.74e-13;6!CL:0000990;8.15e-13;8!CL:0000451;2.35e-10;10!CL:0002619;6.68e-10;3!CL:0000988;3.12e-08;177!CL:0001014;1.41e-07;2!CL:0001016;1.41e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.31e-105,61;CL:0002194,3.07e-99,59;CL:0000576,3.07e-99,59;CL:0000040,3.07e-99,59;CL:0000559,3.07e-99,59;CL:0000557,6.38e-95,67;CL:0000473,2.32e-93,48;CL:0000234,2.32e-93,48;CL:0000839,1.03e-87,66;CL:0000766,2.49e-83,72;CL:0000860,1.11e-80,42;CL:0002057,1.11e-80,42;CL:0000763,3.27e-60,108;CL:0000049,3.27e-60,108;CL:0002087,3.48e-53,115;CL:0000738,3.38e-52,136;CL:0002031,9.07e-51,120;CL:0000988,5.95e-41,177;CL:0000037,4.82e-40,168;CL:0002032,1.47e-38,161;CL:0000837,1.47e-38,161;CL:0000134,2.92e-15,354;CL:0002320,9.97e-15,361;CL:0000219,1.90e-14,386;CL:0000840,4.85e-14,5;CL:0001029,4.85e-14,5;CL:0000235,1.63e-13,6;CL:0000990,8.16e-13,8;CL:0000048,1.47e-10,427;CL:0000451,2.35e-10,10;CL:0000723,3.05e-10,433;CL:0002619,6.27e-10,3;CL:0000034,7.78e-10,441;CL:0001014,1.32e-07,2;CL:0001016,1.32e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.09e-59;42!CL:0000049;4.12e-16;108 | |ontology_enrichment_development_v019=CL:0002057;1.09e-59;42!CL:0000049;4.12e-16;108 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.19e-44!102;UBERON:0003061!3.19e-44!102;UBERON:0002371!3.27e-42!80;UBERON:0002193!5.55e-41!112;UBERON:0001474!9.51e-38!86;UBERON:0004765!6.69e-34!101;UBERON:0001434!6.69e-34!101;UBERON:0002405!4.25e-32!115;UBERON:0002204!1.19e-16!167;UBERON:0003081!4.68e-15!216;UBERON:0002384!2.33e-07!375 | |ontology_enrichment_uberon=UBERON:0002390!3.19e-44!102;UBERON:0003061!3.19e-44!102;UBERON:0002371!3.27e-42!80;UBERON:0002193!5.55e-41!112;UBERON:0001474!9.51e-38!86;UBERON:0004765!6.69e-34!101;UBERON:0001434!6.69e-34!101;UBERON:0002405!4.25e-32!115;UBERON:0002204!1.19e-16!167;UBERON:0003081!4.68e-15!216;UBERON:0002384!2.33e-07!375 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.69e-82,76;UBERON:0001474,1.03e-75,82;UBERON:0002390,1.42e-73,98;UBERON:0003061,1.42e-73,98;UBERON:0002193,1.28e-68,108;UBERON:0002405,1.36e-68,93;UBERON:0004765,4.67e-68,90;UBERON:0001434,3.42e-60,100;UBERON:0002204,1.18e-31,167;UBERON:0003081,4.94e-31,203;UBERON:0000926,1.15e-17,315;UBERON:0004120,1.15e-17,315;UBERON:0006603,1.15e-17,315;UBERON:0002384,5.32e-14,371 | |||
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| ||
|short_description=p3@VOPP1 | |short_description=p3@VOPP1 | ||
}} | }} |
Latest revision as of 01:43, 19 September 2015
Short description: | p3@VOPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_VOPP1_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000545390, uc010kzh.2_5end |
EntrezGene: | VOPP1 |
HGNC: | 34518 |
UniProt: | B0AZU1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.69e-82 | 76 |
bone element | 1.03e-75 | 82 |
hematopoietic system | 1.42e-73 | 98 |
blood island | 1.42e-73 | 98 |
hemolymphoid system | 1.28e-68 | 108 |
immune system | 1.36e-68 | 93 |
skeletal element | 4.67e-68 | 90 |
skeletal system | 3.42e-60 | 100 |
musculoskeletal system | 1.18e-31 | 167 |
lateral plate mesoderm | 4.94e-31 | 203 |
mesoderm | 1.15e-17 | 315 |
mesoderm-derived structure | 1.15e-17 | 315 |
presumptive mesoderm | 1.15e-17 | 315 |
connective tissue | 5.32e-14 | 371 |