FFCP PHASE1:Hg19::chr7:55620433..55620468,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=81552 | |EntrezGene=81552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=34518 | |HGNC=34518 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc010kzi.2_5end | |association_with_transcript=0bp_to_uc010kzi.2_5end | ||
|cluster_id=chr7:55620433..55620468,- | |||
|coexpression_cluster_id=C6 | |||
|description=CAGE_peak_4_at_VOPP1_5end | |description=CAGE_peak_4_at_VOPP1_5end | ||
|id=chr7:55620433..55620468,- | |id=chr7:55620433..55620468,- | ||
|ontology_enrichment_celltype=CL:0002057!7.48e-34!42;CL:0000860!1.76e-30!45;CL:0000766!1.20e-25!76;CL:0002009!3.55e-23!65;CL:0002194!1.55e-21!63;CL:0000576!1.55e-21!63;CL:0000040!1.55e-21!63;CL:0000559!1.55e-21!63;CL:0000557!8.46e-20!71;CL:0000839!8.39e-18!70;CL:0000763!1.43e-16!112;CL:0000049!1.43e-16!112;CL:0000738!7.89e-15!140;CL:0000094!4.43e-10!8;CL:0002087!4.55e-10!119;CL:0000037!1.06e-09!172;CL:0000566!1.06e-09!172;CL:0000988!1.28e-08!182;CL:0002032!1.58e-08!165;CL:0000837!1.58e-08!165;CL:0002031!2.48e-08!124 | |ontology_enrichment_celltype=CL:0002057!7.48e-34!42;CL:0000860!1.76e-30!45;CL:0000766!1.20e-25!76;CL:0002009!3.55e-23!65;CL:0002194!1.55e-21!63;CL:0000576!1.55e-21!63;CL:0000040!1.55e-21!63;CL:0000559!1.55e-21!63;CL:0000557!8.46e-20!71;CL:0000839!8.39e-18!70;CL:0000763!1.43e-16!112;CL:0000049!1.43e-16!112;CL:0000738!7.89e-15!140;CL:0000094!4.43e-10!8;CL:0002087!4.55e-10!119;CL:0000037!1.06e-09!172;CL:0000566!1.06e-09!172;CL:0000988!1.28e-08!182;CL:0002032!1.58e-08!165;CL:0000837!1.58e-08!165;CL:0002031!2.48e-08!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.61e-73;33!CL:0002057;3.61e-73;33!CL:0000473;6.32e-50;39!CL:0000234;6.32e-50;39!CL:0000576;2.82e-43;48!CL:0000766;2.10e-30;69!CL:0000094;3.34e-23;8!CL:0000081;1.93e-16;11!CL:0000763;1.41e-14;100!CL:0002087;1.46e-12;104!CL:0000738;4.45e-11;136!CL:0000767;5.54e-10;3!CL:0000226;1.07e-09;3!CL:0000842;1.07e-09;3!CL:0000775;3.19e-09;3!CL:0002393;2.52e-08;6!CL:0002397;2.52e-08;6!CL:0000771;2.02e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.93e-80,42;CL:0002057,9.93e-80,42;CL:0000766,2.44e-69,72;CL:0000473,1.81e-68,48;CL:0000234,1.81e-68,48;CL:0002009,2.99e-60,61;CL:0002194,6.92e-56,59;CL:0000576,6.92e-56,59;CL:0000040,6.92e-56,59;CL:0000559,6.92e-56,59;CL:0000557,5.77e-54,67;CL:0000839,5.97e-49,66;CL:0000763,7.86e-47,108;CL:0000049,7.86e-47,108;CL:0000738,1.80e-44,136;CL:0000037,1.68e-33,168;CL:0002087,1.02e-32,115;CL:0000988,3.96e-31,177;CL:0002032,1.99e-30,161;CL:0000837,1.99e-30,161;CL:0002031,6.79e-29,120;CL:0000094,2.99e-23,8;CL:0000081,1.78e-16,11;CL:0000767,5.46e-10,3;CL:0000134,9.04e-10,354;CL:0000226,9.79e-10,3;CL:0000842,9.79e-10,3;CL:0002320,2.44e-09,361;CL:0000775,2.90e-09,3;CL:0000219,7.77e-08,386;CL:0000034,1.97e-07,441;CL:0000771,2.02e-07,2;CL:0000048,5.27e-07,427;CL:0000723,9.77e-07,433 | |||
|ontology_enrichment_development_v019=CL:0002057;4.64e-58;42!CL:0000049;8.71e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!9.29e-16!80;UBERON:0001474!1.39e-13!86;UBERON:0002390!2.22e-13!102;UBERON:0003061!2.22e-13!102;UBERON:0002193!3.90e-13!112;UBERON:0002405!1.06e-10!115;UBERON:0004765!5.75e-10!101;UBERON:0001434!5.75e-10!101 | |ontology_enrichment_uberon=UBERON:0002371!9.29e-16!80;UBERON:0001474!1.39e-13!86;UBERON:0002390!2.22e-13!102;UBERON:0003061!2.22e-13!102;UBERON:0002193!3.90e-13!112;UBERON:0002405!1.06e-10!115;UBERON:0004765!5.75e-10!101;UBERON:0001434!5.75e-10!101 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.22e-46,76;UBERON:0001474,3.06e-42,82;UBERON:0002390,2.61e-40,98;UBERON:0003061,2.61e-40,98;UBERON:0004765,1.42e-37,90;UBERON:0002405,4.97e-36,93;UBERON:0002193,1.47e-35,108;UBERON:0001434,8.68e-33,100;UBERON:0002204,9.01e-19,167;UBERON:0003081,1.22e-17,203;UBERON:0002384,9.37e-09,371;UBERON:0000926,5.29e-08,315;UBERON:0004120,5.29e-08,315;UBERON:0006603,5.29e-08,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,10.747223146722,16.255692948188,0,0.30120591877825,0,0.0774672005803016,0,0,72.5733985176759,60.1633342410425,67.2733699219141,0,0.32389366601898,0,1.74477886535478,1.88937971844405,1.94067248950253,5.11343881192506,3.70051099219643,3.71647645074124,2.8769239232215,3.84241059793651,4.49316236788312,11.3766074643084,12.2642089880927,8.12558919566051,4.89430082810772,3.27487380069415,3.37085226667627,13.4676912643197,7.70229664982625,13.4260796417799,1.9791078011203,3.98927315243264,3.40979800426155,15.9615081245721,13.0498601678962,8.71951148593805,3.01498398308092,6.77927793946262,5.64690996233303,11.502590550034,8.47038562771399,8.54448446090388,0.422510572623884,0,1.04829322754188,1.01095768031846,1.20141514273205,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,5.60508562981536,0,0.590129310341499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0.43917392846563,0.0654895377488563,0.364295288292542,0,0,0,0,2.38490624305342,0.571994910780128,0,0.39752481473341,0.860234595106124,0,0,1.25849830862972,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0.549605231791222,27.6738876615733,42.6558290563158,0,0,0,0,0,0.354668382198357,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,1.20097467208968,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0.190254152234598,1.58040879591855,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,0,2.43851768931522,0,0,0,0,0,5.99205619157746,2.99161459204025,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,16.6099934630335,10.566028222541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,1.99031692572366,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0,2.27586896570999,1.27126825146383,0,0,0,0,0.885741385813839,1.4471572635049,0,0,0,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.293977192243133,0.0870592065804026,1.04836000945218,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0.794858446811959,0.253243183823515,0,0.160317640503067,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0.543616824294456,0.418411385249333,0.611989305817931,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,1.5748172408605,6.1904156364636,0.425246896606173,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0.906496732161005,0,0,0,0,0.171086837884329,7.75296524548339,0.213574825135389,0.157204305099666,1.24271716604159,0,0.592834895693833,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.366078794705889,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.617602894321944,0,0,0.578742114812744,0,0.256241518587947,0,0,0,0.389720617678777,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,3.04257927353179,0,0.183428598521679,0.231051332300676,0,0,0,0.451261970095544,0.20170506870352,0,0,0.163771917510097,1.03499260351932,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0.383287282918786,0,0,0.606965604236632,0.227662191351298,0,0,1.02892805662451,0,0.263091094251396,0,0.111231401892069,0.078493092850514,2.67096502857203,0,0,0.431855182437243,0.47775168788705,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0.31020638566432,0.955538938977433,0.111855431797792,0.392600934460972,0.121917924982269,0,1.12929087541872,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0.71421575442263,0.705789743431384,2.08627553391837,0,0,0,0,0.543931921527318,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,3.08405483188508,0.332660356546013,0,0,0,0.269475606319761,0,0.122241444182866,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.6208354749204,10.747223146722,16.255692948188,0,0.30120591877825,0,0.0774672005803016,0,0,72.5733985176759,60.1633342410425,67.2733699219141,0,0.32389366601898,0,1.74477886535478,1.88937971844405,1.94067248950253,5.11343881192506,3.70051099219643,3.71647645074124,2.8769239232215,3.84241059793651,4.49316236788312,11.3766074643084,12.2642089880927,8.12558919566051,4.89430082810772,3.27487380069415,3.37085226667627,13.4676912643197,7.70229664982625,13.4260796417799,1.9791078011203,3.98927315243264,3.40979800426155,15.9615081245721,13.0498601678962,8.71951148593805,3.01498398308092,6.77927793946262,5.64690996233303,11.502590550034,8.47038562771399,8.54448446090388,0.422510572623884,0,1.04829322754188,1.01095768031846,1.20141514273205,0.64290234678832,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0.764546456250458,1.32171328579026,5.60508562981536,0,0.590129310341499,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0,0.221729397462564,0.43917392846563,0.0654895377488563,0.364295288292542,0,0,0,0,2.38490624305342,0.571994910780128,0,0.39752481473341,0.860234595106124,0,0,1.25849830862972,0,0.417989933073621,0,0.35576626268671,0.33472061276467,0,0,0,0.367663080345869,0,0,0,0.112611480483322,0,0,0.549605231791222,27.6738876615733,42.6558290563158,0,0,0,0,0,0.354668382198357,0,0,0.74000264525148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,1.20097467208968,0,0,0,0,0,0,0,0.231860809950154,0.234817388471643,0,0,0.190254152234598,1.58040879591855,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0,0,0,0,0,0,0,0,0,0,0,3.54655368363469,0,2.43851768931522,0,0,0,0,0,5.99205619157746,2.99161459204025,7.0450637284126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72182447021197,16.6099934630335,10.566028222541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,1.46139224653261,0,0,0.510281115829547,0.431831832204279,0,0,0,0,0,0.223874754722178,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0.127612712494584,0.10115778085555,0,0,0.6970372701606,0,0,0,0,0.429374660225974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05650146756755,0,0,0,0,1.99031692572366,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0.211673582723883,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.422008249231538,0.111308705022906,0,0,0,0,0.251932747854276,0,0,0,0.179736702294654,0.179021174675609,0,0.0986434056369336,0,0,0,0.278304294485554,0,0.260427761085233,0,0,2.27586896570999,1.27126825146383,0,0,0,0,0.885741385813839,1.4471572635049,0,0,0,0.438770794307945,0,0,0.307801034015188,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0.489698424477443,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.19566461893209,0,0,0,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0.293977192243133,0.0870592065804026,1.04836000945218,0,0,0,0,0.0969890164884194,0,0,0.274083849293502,0.794858446811959,0.253243183823515,0,0.160317640503067,0.213452994739353,0,0.144090417154106,0,0,0,0,0,0.543616824294456,0.418411385249333,0.611989305817931,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,1.5748172408605,6.1904156364636,0.425246896606173,0,0.0788057072991982,0.262272940674991,0,0,0,0,0,0,0,0,0,0,0,0,0.906496732161005,0,0,0,0,0.171086837884329,7.75296524548339,0.213574825135389,0.157204305099666,1.24271716604159,0,0.592834895693833,0,0,0,0,0,0,0.314108192500469,0.886068179966986,0.366078794705889,0.1251909307065,0.573409195690071,0.110929051536852,0.124192805882767,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0.155262956876259,0,0,0,0,0.380805212168795,0,0.181848659202559,0.107410557042488,0,0,0,0,0,0,0,0,0.260994291965212,0,0,0,0,0.617602894321944,0,0,0.578742114812744,0,0.256241518587947,0,0,0,0.389720617678777,0,0.163565394255844,0,0.245772908753719,0,0,0,0,0,0,0,0.622077260032973,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0.449604575675217,0,0,0.205116364240755,0,0.0691572524642179,0.161475645631851,0,3.04257927353179,0,0.183428598521679,0.231051332300676,0,0,0,0.451261970095544,0.20170506870352,0,0,0.163771917510097,1.03499260351932,0.270150338473579,0,0.206686796501184,0.253663240775627,0,0,0,0.175871244359621,0.383287282918786,0,0,0.606965604236632,0.227662191351298,0,0,1.02892805662451,0,0.263091094251396,0,0.111231401892069,0.078493092850514,2.67096502857203,0,0,0.431855182437243,0.47775168788705,0.142953088353313,0.158013611732727,0,0,0,0,0,0,0,0,0,0.846774100381858,0.22910686854405,0.31020638566432,0.955538938977433,0.111855431797792,0.392600934460972,0.121917924982269,0,1.12929087541872,0,0,0,0,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0.4226557275834,0,0,0.0644578879735772,0,0.71421575442263,0.705789743431384,2.08627553391837,0,0,0,0,0.543931921527318,0.872701380680755,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0.12729431655633,0,0.217716747896961,0,0.0673520530145875,3.08405483188508,0.332660356546013,0,0,0,0.269475606319761,0,0.122241444182866,0,0,0.201273793591026,0 | ||
|short_description=p4@VOPP1 | |short_description=p4@VOPP1 | ||
}} | }} |
Latest revision as of 01:44, 19 September 2015
Short description: | p4@VOPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_VOPP1_5end |
Coexpression cluster: | C6_CD14_Eosinophils_Basophils_Peripheral_CD34_Natural_immature |
Association with transcript: | 0bp_to_uc010kzi.2_5end |
EntrezGene: | VOPP1 |
HGNC: | 34518 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.22e-46 | 76 |
bone element | 3.06e-42 | 82 |
hematopoietic system | 2.61e-40 | 98 |
blood island | 2.61e-40 | 98 |
skeletal element | 1.42e-37 | 90 |
immune system | 4.97e-36 | 93 |
hemolymphoid system | 1.47e-35 | 108 |
skeletal system | 8.68e-33 | 100 |
musculoskeletal system | 9.01e-19 | 167 |
lateral plate mesoderm | 1.22e-17 | 203 |
connective tissue | 9.37e-09 | 371 |
mesoderm | 5.29e-08 | 315 |
mesoderm-derived structure | 5.29e-08 | 315 |
presumptive mesoderm | 5.29e-08 | 315 |