FFCP PHASE1:Hg19::chr4:84376953..84377040,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=113510 | |EntrezGene=113510 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18536 | |HGNC=18536 | ||
|TSSclassifier=strong | |||
|UniProt=Q8TDG4,E3W982,E3W980 | |UniProt=Q8TDG4,E3W982,E3W980 | ||
|association_with_transcript=0bp_to_ENST00000295488,ENST00000440639,ENST00000508591,ENST00000510985,ENST00000515482,NM_133636,uc003hol.3,uc003hom.2,uc003hon.1,uc003hop.1,uc003hoq.1,uc010ikb.2,uc010ikc.2_5end | |association_with_transcript=0bp_to_ENST00000295488,ENST00000440639,ENST00000508591,ENST00000510985,ENST00000515482,NM_133636,uc003hol.3,uc003hom.2,uc003hon.1,uc003hop.1,uc003hoq.1,uc010ikb.2,uc010ikc.2_5end | ||
|cluster_id=chr4:84376953..84377040,- | |||
|coexpression_cluster_id=C1354 | |||
|description=CAGE_peak_1_at_HELQ_5end | |description=CAGE_peak_1_at_HELQ_5end | ||
|id=chr4:84376953..84377040,- | |id=chr4:84376953..84377040,- | ||
|ontology_enrichment_celltype=CL:0000037!1.90e-34!172;CL:0000566!1.90e-34!172;CL:0002032!2.60e-33!165;CL:0000837!2.60e-33!165;CL:0000738!8.47e-33!140;CL:0000988!1.66e-31!182;CL:0002031!5.24e-31!124;CL:0002087!1.69e-28!119;CL:0000766!1.10e-17!76;CL:0000763!2.92e-17!112;CL:0000049!2.92e-17!112;CL:0000838!8.64e-16!52;CL:0000542!1.14e-15!53;CL:0000051!1.14e-15!53;CL:0000839!7.89e-15!70;CL:0000557!1.51e-14!71;CL:0002057!8.01e-13!42;CL:0002009!2.02e-12!65;CL:0002194!4.40e-12!63;CL:0000576!4.40e-12!63;CL:0000040!4.40e-12!63;CL:0000559!4.40e-12!63;CL:0000860!8.48e-12!45;CL:0000791!3.91e-11!18;CL:0000789!3.91e-11!18;CL:0002420!3.91e-11!18;CL:0002419!3.91e-11!18;CL:0000790!3.91e-11!18;CL:0000134!4.42e-10!358;CL:0002320!7.49e-10!365;CL:0000219!2.03e-08!390;CL:0000625!2.52e-08!11;CL:0000236!2.77e-08!14;CL:0000084!3.89e-08!25;CL:0000827!3.89e-08!25;CL:0000945!2.42e-07!24;CL:0000826!2.42e-07!24 | |ontology_enrichment_celltype=CL:0000037!1.90e-34!172;CL:0000566!1.90e-34!172;CL:0002032!2.60e-33!165;CL:0000837!2.60e-33!165;CL:0000738!8.47e-33!140;CL:0000988!1.66e-31!182;CL:0002031!5.24e-31!124;CL:0002087!1.69e-28!119;CL:0000766!1.10e-17!76;CL:0000763!2.92e-17!112;CL:0000049!2.92e-17!112;CL:0000838!8.64e-16!52;CL:0000542!1.14e-15!53;CL:0000051!1.14e-15!53;CL:0000839!7.89e-15!70;CL:0000557!1.51e-14!71;CL:0002057!8.01e-13!42;CL:0002009!2.02e-12!65;CL:0002194!4.40e-12!63;CL:0000576!4.40e-12!63;CL:0000040!4.40e-12!63;CL:0000559!4.40e-12!63;CL:0000860!8.48e-12!45;CL:0000791!3.91e-11!18;CL:0000789!3.91e-11!18;CL:0002420!3.91e-11!18;CL:0002419!3.91e-11!18;CL:0000790!3.91e-11!18;CL:0000134!4.42e-10!358;CL:0002320!7.49e-10!365;CL:0000219!2.03e-08!390;CL:0000625!2.52e-08!11;CL:0000236!2.77e-08!14;CL:0000084!3.89e-08!25;CL:0000827!3.89e-08!25;CL:0000945!2.42e-07!24;CL:0000826!2.42e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000791;3.49e-11;18!CL:0000789;3.49e-11;18!CL:0002419;3.49e-11;18!CL:0000860;7.56e-11;33!CL:0002057;7.56e-11;33!CL:0000576;4.31e-10;48!CL:0000542;9.06e-10;53!CL:0002087;1.54e-09;104!CL:0000766;6.66e-09;69!CL:0000473;1.60e-08;39!CL:0000234;1.60e-08;39!CL:0000236;2.27e-08;13!CL:0000625;2.37e-08;11!CL:0000084;3.87e-08;25!CL:0000738;1.01e-07;136!CL:0000945;2.76e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,7.31e-36,168;CL:0002032,9.73e-35,161;CL:0000837,9.73e-35,161;CL:0000738,2.06e-34,136;CL:0000988,1.76e-33,177;CL:0002031,1.02e-32,120;CL:0002087,3.73e-30,115;CL:0000766,2.54e-19,72;CL:0000763,1.93e-18,108;CL:0000049,1.93e-18,108;CL:0000839,2.40e-16,66;CL:0000557,5.06e-16,67;CL:0000838,8.64e-16,52;CL:0000542,1.14e-15,53;CL:0000051,1.14e-15,53;CL:0002009,8.17e-14,61;CL:0002194,1.77e-13,59;CL:0000576,1.77e-13,59;CL:0000040,1.77e-13,59;CL:0000559,1.77e-13,59;CL:0000860,8.01e-13,42;CL:0002057,8.01e-13,42;CL:0000473,6.38e-12,48;CL:0000234,6.38e-12,48;CL:0000791,3.91e-11,18;CL:0000789,3.91e-11,18;CL:0002420,3.91e-11,18;CL:0002419,3.91e-11,18;CL:0000790,3.91e-11,18;CL:0000134,1.70e-10,354;CL:0002320,2.94e-10,361;CL:0000219,8.94e-09,386;CL:0000625,2.52e-08,11;CL:0000236,2.77e-08,14;CL:0000084,3.89e-08,25;CL:0000827,3.89e-08,25;CL:0000945,2.42e-07,24;CL:0000826,2.42e-07,24 | |||
|ontology_enrichment_development_v019=CL:0000790;3.49e-11;18!CL:0000051;9.06e-10;53!CL:0002057;1.31e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.12e-19!102;UBERON:0003061!7.12e-19!102;UBERON:0002193!2.31e-17!112;UBERON:0007023!7.94e-16!115;UBERON:0002371!7.57e-13!80;UBERON:0001474!1.06e-12!86;UBERON:0004765!1.21e-10!101;UBERON:0001434!1.21e-10!101;UBERON:0002384!1.45e-09!375;UBERON:0002405!5.89e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.11e-20,98;UBERON:0003061,3.11e-20,98;UBERON:0002193,1.51e-18,108;UBERON:0007023,1.02e-15,114;UBERON:0002405,2.26e-14,93;UBERON:0002371,4.63e-14,76;UBERON:0001474,7.73e-14,82;UBERON:0004765,1.89e-12,90;UBERON:0001434,1.52e-11,100;UBERON:0002384,5.87e-10,371 | |||
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|short_description=p1@HELQ | |short_description=p1@HELQ | ||
}} | }} |
Latest revision as of 02:11, 19 September 2015
Short description: | p1@HELQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HELQ_5end |
Coexpression cluster: | C1354_CD4_CD19_CD8_cord_Natural_Mast_thymus |
Association with transcript: | 0bp_to_ENST00000295488, ENST00000440639, ENST00000508591, ENST00000510985, ENST00000515482, NM_133636, uc003hol.3, uc003hom.2, uc003hon.1, uc003hop.1, uc003hoq.1, uc010ikb.2, uc010ikc.2_5end |
EntrezGene: | HELQ |
HGNC: | 18536 |
UniProt: | Q8TDG4E3W982E3W980 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.11e-20 | 98 |
blood island | 3.11e-20 | 98 |
hemolymphoid system | 1.51e-18 | 108 |
adult organism | 1.02e-15 | 114 |
immune system | 2.26e-14 | 93 |
bone marrow | 4.63e-14 | 76 |
bone element | 7.73e-14 | 82 |
skeletal element | 1.89e-12 | 90 |
skeletal system | 1.52e-11 | 100 |
connective tissue | 5.87e-10 | 371 |