FFCP PHASE1:Hg19::chr6:46293461..46293464,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10231 | |EntrezGene=10231 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3041 | |HGNC=3041 | ||
|TSSclassifier=strong | |||
|UniProt=Q14206 | |UniProt=Q14206 | ||
|association_with_transcript=-56bp_to_ENST00000330430_5end | |association_with_transcript=-56bp_to_ENST00000330430_5end | ||
|cluster_id=chr6:46293461..46293464,- | |||
|coexpression_cluster_id=C2861 | |coexpression_cluster_id=C2861 | ||
|description=CAGE_peak_13_at_RCAN2_5end | |description=CAGE_peak_13_at_RCAN2_5end | ||
|id=chr6:46293461..46293464,- | |id=chr6:46293461..46293464,- | ||
|ontology_enrichment_celltype=CL:0000064;3.71e-27;3!CL:0000067;3.71e-27;3!CL:0005012;3.71e-27;3!CL:0002304;3.71e-27;3!CL:0000342;1.97e-10;1!CL:0002565;1.97e-10;1!CL:0000306;1.05e-09;4!CL:0002222;1.05e-09;4!CL:0002224;1.05e-09;4!CL:0000075;5.00e-08;27 | |ontology_enrichment_celltype=CL:0000064!2.84e-07!3;CL:0005012!2.84e-07!3;CL:0000067!2.84e-07!3;CL:0002304!2.84e-07!3 | ||
| | |ontology_enrichment_celltype_v019=CL:0000064;3.71e-27;3!CL:0000067;3.71e-27;3!CL:0005012;3.71e-27;3!CL:0002304;3.71e-27;3!CL:0000342;1.97e-10;1!CL:0002565;1.97e-10;1!CL:0000306;1.05e-09;4!CL:0002222;1.05e-09;4!CL:0002224;1.05e-09;4!CL:0000075;5.00e-08;27 | ||
|ontology_enrichment_disease=DOID:4960;2.48e-10;1!DOID:0070004;2.48e-10;1 | |ontology_enrichment_celltype_v019_2=CL:0000064,3.89e-27,3;CL:0000067,3.89e-27,3;CL:0005012,3.89e-27,3;CL:0002304,3.89e-27,3;CL:0000342,1.98e-10,1;CL:0002565,1.98e-10,1;CL:0000306,1.12e-09,4;CL:0002222,1.12e-09,4;CL:0002224,1.12e-09,4;CL:0000075,5.16e-08,27 | ||
|ontology_enrichment_uberon=UBERON:0000488;8.56e-36;4!UBERON:0007625;1.75e-28;11!UBERON:0001778;3.71e-27;3!UBERON:0001775;3.71e-27;3!UBERON:0001950;3.03e-25;20!UBERON:0002203;5.61e-24;6!UBERON:0001768;5.61e-24;6!UBERON:0002200;5.61e-24;6!UBERON:0002619;5.71e-23;22!UBERON:0001801;2.64e-22;14!UBERON:0000956;3.28e-20;25!UBERON:0000203;3.28e-20;25!UBERON:0001869;1.23e-17;32!UBERON:0001893;3.53e-17;34!UBERON:0000019;2.49e-16;19!UBERON:0000047;2.49e-16;19!UBERON:0004088;2.49e-16;19!UBERON:0010230;2.49e-16;19!UBERON:0002021;3.92e-16;5!UBERON:0000970;1.71e-15;20!UBERON:0002104;9.81e-15;21!UBERON:0001456;9.81e-15;21!UBERON:0003528;1.11e-14;34!UBERON:0002020;1.11e-14;34!UBERON:0002780;1.29e-14;41!UBERON:0001890;1.29e-14;41!UBERON:0002791;2.36e-14;32!UBERON:0000020;2.05e-13;23!UBERON:0002298;2.15e-13;6!UBERON:0006876;3.44e-13;11!UBERON:0001032;7.74e-13;24!UBERON:0004456;7.74e-13;24!UBERON:0000988;2.38e-12;3!UBERON:0000073;4.94e-12;53!UBERON:0002616;4.94e-12;53!UBERON:0002506;1.97e-10;1!UBERON:0001769;1.97e-10;1!UBERON:0007190;2.48e-10;1!UBERON:0002581;3.39e-10;1!UBERON:0002902;6.91e-10;1!UBERON:0002022;6.91e-10;1!UBERON:0009899;6.91e-10;1!UBERON:0010077;1.05e-09;4!UBERON:0005389;1.05e-09;4!UBERON:0000484;1.05e-09;4!UBERON:0000965;1.05e-09;4!UBERON:0001803;1.05e-09;4!UBERON:0010371;1.34e-09;31!UBERON:0000955;1.60e-08;68!UBERON:0001872;5.30e-08;5!UBERON:0004733;5.96e-07;12!UBERON:0002028;5.96e-07;12!UBERON:0000200;7.58e-07;6!UBERON:0001017;8.95e-07;75 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4960;2.48e-10;1!DOID:0070004;2.48e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4960,2.84e-10,1;DOID:0070004,2.84e-10,1 | |||
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| ||
|short_description=p13@RCAN2 | |short_description=p13@RCAN2 | ||
}} | }} |
Latest revision as of 02:40, 19 September 2015
Short description: | p13@RCAN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_RCAN2_5end |
Coexpression cluster: | C2861_Ciliary_anaplastic_paracentral_pons_parietal_postcentral_medial |
Association with transcript: | -56bp_to_ENST00000330430_5end |
EntrezGene: | RCAN2 |
HGNC: | 3041 |
UniProt: | Q14206 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 3.89e-27 | 3 |
ciliated epithelial cell | 3.89e-27 | 3 |
multi-ciliated epithelial cell | 3.89e-27 | 3 |
non-pigmented ciliary epithelial cell | 3.89e-27 | 3 |
pigment cell (sensu Vertebrata) | 1.98e-10 | 1 |
iris pigment epithelial cell | 1.98e-10 | 1 |
crystallin accumulating cell | 1.12e-09 | 4 |
vertebrate lens cell | 1.12e-09 | 4 |
lens epithelial cell | 1.12e-09 | 4 |
columnar/cuboidal epithelial cell | 5.16e-08 | 27 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 2.84e-10 | 1 |
myeloma | 2.84e-10 | 1 |