FFCP PHASE1:Hg19::chr10:73610996..73611015,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5660 | |EntrezGene=5660 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9498 | |HGNC=9498 | ||
|TSSclassifier=strong | |||
|UniProt=F5H0X6,P07602 | |UniProt=F5H0X6,P07602 | ||
|association_with_transcript=0bp_to_ENST00000394940,ENST00000404083_5end | |association_with_transcript=0bp_to_ENST00000394940,ENST00000404083_5end | ||
|cluster_id=chr10:73610996..73611015,- | |||
|coexpression_cluster_id=C143 | |coexpression_cluster_id=C143 | ||
|description=CAGE_peak_1_at_PSAP_5end | |description=CAGE_peak_1_at_PSAP_5end | ||
|id=chr10:73610996..73611015,- | |id=chr10:73610996..73611015,- | ||
|ontology_enrichment_celltype=CL:0000766!1.71e-29!76;CL:0002057!4.66e-27!42;CL:0002194!7.39e-27!63;CL:0000576!7.39e-27!63;CL:0000040!7.39e-27!63;CL:0000559!7.39e-27!63;CL:0002009!3.83e-25!65;CL:0000839!2.66e-24!70;CL:0000860!9.69e-24!45;CL:0000557!2.26e-23!71;CL:0000763!7.13e-09!112;CL:0000049!7.13e-09!112 | |ontology_enrichment_celltype=CL:0000766!1.71e-29!76;CL:0002057!4.66e-27!42;CL:0002194!7.39e-27!63;CL:0000576!7.39e-27!63;CL:0000040!7.39e-27!63;CL:0000559!7.39e-27!63;CL:0002009!3.83e-25!65;CL:0000839!2.66e-24!70;CL:0000860!9.69e-24!45;CL:0000557!2.26e-23!71;CL:0000763!7.13e-09!112;CL:0000049!7.13e-09!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;3.26e-20;39!CL:0000234;3.26e-20;39!CL:0000860;5.06e-20;33!CL:0002057;5.06e-20;33!CL:0000576;2.44e-16;48!CL:0000766;7.78e-14;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,6.08e-32,72;CL:0000473,3.37e-31,48;CL:0000234,3.37e-31,48;CL:0002194,1.59e-29,59;CL:0000576,1.59e-29,59;CL:0000040,1.59e-29,59;CL:0000559,1.59e-29,59;CL:0002009,1.33e-27,61;CL:0000860,4.66e-27,42;CL:0002057,4.66e-27,42;CL:0000839,1.53e-26,66;CL:0000557,1.62e-25,67;CL:0000763,1.45e-09,108;CL:0000049,1.45e-09,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.24e-19;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.39e-20!216;UBERON:0002193!5.36e-20!112;UBERON:0002390!2.09e-19!102;UBERON:0003061!2.09e-19!102;UBERON:0002371!2.46e-19!80;UBERON:0002405!1.90e-17!115;UBERON:0000467!4.96e-17!625;UBERON:0000480!1.06e-16!626;UBERON:0001474!2.18e-16!86;UBERON:0000468!4.32e-16!659;UBERON:0000062!1.89e-15!511;UBERON:0000923!7.65e-14!604;UBERON:0005291!7.65e-14!604;UBERON:0006598!7.65e-14!604;UBERON:0002532!7.65e-14!604;UBERON:0002050!1.03e-13!605;UBERON:0005423!1.03e-13!605;UBERON:0004765!2.56e-13!101;UBERON:0001434!2.56e-13!101;UBERON:0000922!1.75e-12!612;UBERON:0000926!6.77e-11!448;UBERON:0004120!6.77e-11!448;UBERON:0006603!6.77e-11!448;UBERON:0007023!1.63e-09!115;UBERON:0002204!1.51e-07!167 | |ontology_enrichment_uberon=UBERON:0003081!3.39e-20!216;UBERON:0002193!5.36e-20!112;UBERON:0002390!2.09e-19!102;UBERON:0003061!2.09e-19!102;UBERON:0002371!2.46e-19!80;UBERON:0002405!1.90e-17!115;UBERON:0000467!4.96e-17!625;UBERON:0000480!1.06e-16!626;UBERON:0001474!2.18e-16!86;UBERON:0000468!4.32e-16!659;UBERON:0000062!1.89e-15!511;UBERON:0000923!7.65e-14!604;UBERON:0005291!7.65e-14!604;UBERON:0006598!7.65e-14!604;UBERON:0002532!7.65e-14!604;UBERON:0002050!1.03e-13!605;UBERON:0005423!1.03e-13!605;UBERON:0004765!2.56e-13!101;UBERON:0001434!2.56e-13!101;UBERON:0000922!1.75e-12!612;UBERON:0000926!6.77e-11!448;UBERON:0004120!6.77e-11!448;UBERON:0006603!6.77e-11!448;UBERON:0007023!1.63e-09!115;UBERON:0002204!1.51e-07!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.69e-21,108;UBERON:0002371,5.36e-21,76;UBERON:0002390,8.94e-21,98;UBERON:0003061,8.94e-21,98;UBERON:0003081,2.53e-20,203;UBERON:0002405,1.16e-19,93;UBERON:0000926,3.23e-18,315;UBERON:0004120,3.23e-18,315;UBERON:0006603,3.23e-18,315;UBERON:0004765,6.43e-18,90;UBERON:0001474,9.26e-18,82;UBERON:0001434,4.00e-15,100;UBERON:0005423,3.34e-13,581;UBERON:0000922,3.70e-13,592;UBERON:0000923,7.40e-13,560;UBERON:0010316,7.40e-13,560;UBERON:0005291,7.40e-13,560;UBERON:0006598,7.40e-13,560;UBERON:0010317,7.40e-13,560;UBERON:0002532,7.40e-13,560;UBERON:0002050,1.46e-12,564;UBERON:0007023,2.16e-09,114;UBERON:0002204,7.58e-09,167 | |||
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330898209489,149.384917413307 | ||
|short_description=p1@PSAP | |short_description=p1@PSAP | ||
}} | }} |
Latest revision as of 04:28, 19 September 2015
Short description: | p1@PSAP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSAP_5end |
Coexpression cluster: | C143_Monocytederived_CD14_Macrophage_Dendritic_Basophils_CD14CD16_Osteoblast |
Association with transcript: | 0bp_to_ENST00000394940, ENST00000404083_5end |
EntrezGene: | PSAP |
HGNC: | 9498 |
UniProt: | F5H0X6P07602 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 6.08e-32 | 72 |
defensive cell | 3.37e-31 | 48 |
phagocyte | 3.37e-31 | 48 |
monopoietic cell | 1.59e-29 | 59 |
monocyte | 1.59e-29 | 59 |
monoblast | 1.59e-29 | 59 |
promonocyte | 1.59e-29 | 59 |
macrophage dendritic cell progenitor | 1.33e-27 | 61 |
classical monocyte | 4.66e-27 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.66e-27 | 42 |
myeloid lineage restricted progenitor cell | 1.53e-26 | 66 |
granulocyte monocyte progenitor cell | 1.62e-25 | 67 |
myeloid cell | 1.45e-09 | 108 |
common myeloid progenitor | 1.45e-09 | 108 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.69e-21 | 108 |
bone marrow | 5.36e-21 | 76 |
hematopoietic system | 8.94e-21 | 98 |
blood island | 8.94e-21 | 98 |
lateral plate mesoderm | 2.53e-20 | 203 |
immune system | 1.16e-19 | 93 |
mesoderm | 3.23e-18 | 315 |
mesoderm-derived structure | 3.23e-18 | 315 |
presumptive mesoderm | 3.23e-18 | 315 |
skeletal element | 6.43e-18 | 90 |
bone element | 9.26e-18 | 82 |
skeletal system | 4.00e-15 | 100 |
developing anatomical structure | 3.34e-13 | 581 |
embryo | 3.70e-13 | 592 |
germ layer | 7.40e-13 | 560 |
germ layer / neural crest | 7.40e-13 | 560 |
embryonic tissue | 7.40e-13 | 560 |
presumptive structure | 7.40e-13 | 560 |
germ layer / neural crest derived structure | 7.40e-13 | 560 |
epiblast (generic) | 7.40e-13 | 560 |
embryonic structure | 1.46e-12 | 564 |
adult organism | 2.16e-09 | 114 |
musculoskeletal system | 7.58e-09 | 167 |