FFCP PHASE1:Hg19::chr12:54422268..54422278,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:54422268..54422278,+ to FFCP PHASE1:Hg19::chr12:54422268..54422278,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3223 | |EntrezGene=3223 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5128 | |HGNC=5128 | ||
|TSSclassifier=strong | |||
|UniProt=P09630 | |UniProt=P09630 | ||
|association_with_transcript=74bp_to_NM_004503,uc001sev.2_5end | |||
|cluster_id=chr12:54422268..54422278,+ | |||
|description=CAGE_peak_8_at_HOXC6_5end | |||
|id=chr12:54422268..54422278,+ | |||
|ontology_enrichment_celltype=CL:0000136!6.85e-23!15;CL:0002334!1.89e-16!12;CL:0002570!4.88e-08!8;CL:0000188!9.77e-08!9;CL:0002564!5.36e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.69e-24;13!CL:0002564;5.42e-21;3!CL:0002602;5.61e-15;2!CL:0002617;2.52e-14;2!CL:0002521;2.90e-10;3!CL:0002580;1.22e-09;3!CL:0002581;3.57e-08;1!CL:0002570;4.73e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,2.04e-34,15;CL:0002564,5.43e-21,3;CL:0002602,5.62e-15,2;CL:0002617,1.47e-14,2;CL:0002521,2.91e-10,3;CL:0002580,1.59e-09,3;CL:0002581,2.90e-08,1;CL:0002570,5.41e-08,8 | |||
|ontology_enrichment_development_v019=UBERON:0004874;7.59e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!1.15e-14!14;UBERON:0003688!1.33e-10!6;UBERON:0002358!1.33e-10!6;UBERON:0003684!1.33e-10!6;UBERON:0001178!1.33e-10!6;UBERON:0005174!7.99e-10!5;UBERON:0001137!7.99e-10!5;UBERON:0004457!2.76e-08!12;UBERON:0000042!2.76e-08!12;UBERON:0001443!2.80e-08!11;UBERON:0002242!5.36e-07!3;UBERON:0003068!5.36e-07!3;UBERON:0002328!5.36e-07!3;UBERON:0004880!5.36e-07!3;UBERON:0000310!9.04e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;3.67e-34;5!UBERON:0002216;3.67e-34;5!UBERON:0011134;3.67e-34;5!UBERON:0002209;3.67e-34;5!UBERON:0002213;3.67e-34;5!UBERON:0007844;3.67e-34;5!UBERON:0011138;3.67e-34;5!UBERON:0001130;3.67e-34;5!UBERON:0001066;3.67e-34;5!UBERON:0001468;3.67e-34;5!UBERON:0001443;1.78e-21;11!UBERON:0004905;2.56e-21;8!UBERON:0000982;2.56e-21;8!UBERON:0004770;2.56e-21;8!UBERON:0002242;5.42e-21;3!UBERON:0001013;5.79e-17;14!UBERON:0000310;1.94e-16;10!UBERON:0006444;5.61e-15;2!UBERON:0001995;5.61e-15;2!UBERON:0004715;5.61e-15;2!UBERON:0005090;1.19e-14;2!UBERON:0001630;1.19e-14;2!UBERON:0000075;1.44e-10;16!UBERON:0002418;2.77e-10;3!UBERON:0004755;2.77e-10;3!UBERON:0002190;2.90e-10;3!UBERON:0004765;6.50e-09;26!UBERON:0002426;1.65e-08;1!UBERON:0003831;1.65e-08;1!UBERON:0003898;1.65e-08;1!UBERON:0004830;1.65e-08;1!UBERON:0003830;1.65e-08;1!UBERON:0005175;1.65e-08;1!UBERON:0001774;1.65e-08;1!UBERON:0001103;1.65e-08;1!UBERON:0007029;7.59e-08;1!UBERON:0000989;7.59e-08;1!UBERON:0001389;7.59e-08;1!UBERON:0000026;7.59e-08;1!UBERON:0008784;7.59e-08;1!UBERON:0006058;7.59e-08;1!UBERON:0008811;7.59e-08;1!UBERON:0003663;7.59e-08;1!UBERON:0004256;7.59e-08;1!UBERON:0004708;7.59e-08;1!UBERON:0002101;7.59e-08;1!UBERON:0004709;7.59e-08;1!UBERON:0002529;7.59e-08;1!UBERON:0010538;7.59e-08;1!UBERON:0003661;7.59e-08;1!UBERON:0010890;7.59e-08;1!UBERON:0002471;7.59e-08;1!UBERON:0001383;7.59e-08;1!UBERON:0010758;7.59e-08;1!UBERON:0010707;7.59e-08;1!UBERON:0000978;7.59e-08;1!UBERON:0002103;7.59e-08;1!UBERON:0001665;7.59e-08;1!UBERON:0003823;7.59e-08;1!UBERON:0000154;7.59e-08;1!UBERON:0010709;7.59e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,3.69e-34,5;UBERON:0002216,3.69e-34,5;UBERON:0011134,3.69e-34,5;UBERON:0002209,3.69e-34,5;UBERON:0002213,3.69e-34,5;UBERON:0005856,3.69e-34,5;UBERON:0005866,3.69e-34,5;UBERON:0005863,3.69e-34,5;UBERON:0007844,3.69e-34,5;UBERON:0011138,3.69e-34,5;UBERON:0001130,3.69e-34,5;UBERON:0001066,3.69e-34,5;UBERON:0001468,3.69e-34,5;UBERON:0001443,1.55e-21,11;UBERON:0004905,2.56e-21,8;UBERON:0000982,2.56e-21,8;UBERON:0004770,2.56e-21,8;UBERON:0002242,5.43e-21,3;UBERON:0003068,5.43e-21,3;UBERON:0002328,5.43e-21,3;UBERON:0004880,5.43e-21,3;UBERON:0001013,6.23e-17,14;UBERON:0000310,1.71e-16,10;UBERON:0006444,5.62e-15,2;UBERON:0001995,5.62e-15,2;UBERON:0004715,5.62e-15,2;UBERON:0005090,9.10e-15,2;UBERON:0001630,9.10e-15,2;UBERON:0000075,1.44e-10,16;UBERON:0002418,2.78e-10,3;UBERON:0004755,2.78e-10,3;UBERON:0002190,2.91e-10,3;UBERON:0002426,1.65e-08,1;UBERON:0003831,1.65e-08,1;UBERON:0003898,1.65e-08,1;UBERON:0004830,1.65e-08,1;UBERON:0003830,1.65e-08,1;UBERON:0005175,1.65e-08,1;UBERON:0001774,1.65e-08,1;UBERON:0001103,1.65e-08,1;UBERON:0010084,1.65e-08,1;UBERON:0000989,5.05e-08,1;UBERON:0008811,5.05e-08,1;UBERON:0006258,5.05e-08,1;UBERON:0005876,5.05e-08,1;UBERON:0004874,5.05e-08,1;UBERON:0007029,5.40e-08,1;UBERON:0005418,5.79e-08,1;UBERON:0001389,5.79e-08,1;UBERON:0000026,5.79e-08,1;UBERON:0008784,5.79e-08,1;UBERON:0006058,5.79e-08,1;UBERON:0003663,5.79e-08,1;UBERON:0004256,5.79e-08,1;UBERON:0004708,5.79e-08,1;UBERON:0002101,5.79e-08,1;UBERON:0004709,5.79e-08,1;UBERON:0002529,5.79e-08,1;UBERON:0010538,5.79e-08,1;UBERON:0003661,5.79e-08,1;UBERON:0010890,5.79e-08,1;UBERON:0002471,5.79e-08,1;UBERON:0001383,5.79e-08,1;UBERON:0004357,5.79e-08,1;UBERON:0004347,5.79e-08,1;UBERON:0005420,5.79e-08,1;UBERON:0005732,5.79e-08,1;UBERON:0010758,5.79e-08,1;UBERON:0010707,5.79e-08,1;UBERON:0000978,5.79e-08,1;UBERON:0002103,5.79e-08,1;UBERON:0001665,5.79e-08,1;UBERON:0003823,5.79e-08,1;UBERON:0000154,5.79e-08,1;UBERON:0010709,5.79e-08,1;UBERON:0005733,5.79e-08,1;UBERON:0005730,5.79e-08,1 | |||
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|short_description=p8@HOXC6 | |||
}} | }} |
Latest revision as of 04:59, 19 September 2015
Short description: | p8@HOXC6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_HOXC6_5end |
Coexpression cluster: | NA |
Association with transcript: | 74bp_to_NM_004503, uc001sev.2_5end |
EntrezGene: | HOXC6 |
HGNC: | 5128 |
UniProt: | P09630 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 2.04e-34 | 15 |
nucleus pulposus cell of intervertebral disc | 5.43e-21 | 3 |
annulus pulposus cell | 5.62e-15 | 2 |
adipocyte of breast | 1.47e-14 | 2 |
subcutaneous fat cell | 2.91e-10 | 3 |
preadipocyte of the breast | 1.59e-09 | 3 |
perirenal preadipocyte | 2.90e-08 | 1 |
mesenchymal stem cell of adipose | 5.41e-08 | 8 |