FFCP PHASE1:Hg19::chr18:3247277..3247295,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10627 | |EntrezGene=10627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16701 | |HGNC=16701 | ||
|TSSclassifier=strong | |||
|UniProt=P19105,Q53X45 | |UniProt=P19105,Q53X45 | ||
|association_with_transcript=-232bp_to_ENST00000217652,NM_006471,uc002klr.2_5end | |association_with_transcript=-232bp_to_ENST00000217652,NM_006471,uc002klr.2_5end | ||
|cluster_id=chr18:3247277..3247295,+ | |||
|coexpression_cluster_id=C14 | |coexpression_cluster_id=C14 | ||
|description=CAGE_peak_5_at_MYL12A_5end | |description=CAGE_peak_5_at_MYL12A_5end | ||
|id=chr18:3247277..3247295,+ | |id=chr18:3247277..3247295,+ | ||
|ontology_enrichment_celltype=CL:0002139;2.45e-17;24!CL:0000115;2.74e-13;36!CL:0000071;3.11e-12;18!CL:0002078;1.28e-09;45!CL:1000413;8.69e-08;9!CL:0000136;9.14e-08;13!CL:0002138;8.80e-07;6 | |ontology_enrichment_celltype=CL:0002139!1.32e-12!24;CL:0000115!7.72e-11!35;CL:0002078!6.29e-10!44;CL:0000071!2.47e-09!18;CL:0002546!2.47e-09!18;CL:0000213!1.10e-07!57;CL:0000215!1.10e-07!57;CL:0000222!5.53e-07!119 | ||
| | |ontology_enrichment_celltype_v019=CL:0002139;2.45e-17;24!CL:0000115;2.74e-13;36!CL:0000071;3.11e-12;18!CL:0002078;1.28e-09;45!CL:1000413;8.69e-08;9!CL:0000136;9.14e-08;13!CL:0002138;8.80e-07;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.36e-17,24;CL:0000115,5.55e-15,36;CL:0002078,1.72e-13,45;CL:0000071,1.39e-12,18;CL:0002546,1.39e-12,18;CL:0000213,5.64e-10,58;CL:0000215,5.64e-10,58;CL:1000413,5.69e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002546;3.11e-12;18!CL:0005022;8.80e-07;6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0004638;3.11e-12;18!UBERON:0001986;3.11e-12;18!UBERON:0004852;3.11e-12;18!UBERON:0000055;7.96e-10;65!UBERON:0000178;5.07e-09;15!UBERON:0000179;5.07e-09;15!UBERON:0000463;5.07e-09;15!UBERON:0000487;5.96e-09;22!UBERON:0006914;4.04e-08;25!UBERON:0003915;8.69e-08;9!UBERON:0004700;8.69e-08;9!UBERON:0001917;8.69e-08;9!UBERON:0001473;1.01e-07;8!UBERON:0004536;1.01e-07;8!UBERON:0006558;1.01e-07;8!UBERON:0004535;1.27e-07;109!UBERON:0001009;1.63e-07;112!UBERON:0002193;1.69e-07;42!UBERON:0007500;2.81e-07;56!UBERON:0001981;2.81e-07;56!UBERON:0004537;2.81e-07;56 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001009!2.39e-22!113;UBERON:0004535!9.89e-21!110;UBERON:0003081!4.60e-16!216;UBERON:0000055!1.75e-14!69;UBERON:0002049!4.51e-14!79;UBERON:0007798!4.51e-14!79;UBERON:0003914!1.50e-12!118;UBERON:0004872!2.18e-12!84;UBERON:0001981!1.15e-11!60;UBERON:0007500!1.15e-11!60;UBERON:0004537!1.15e-11!60;UBERON:0006965!1.15e-11!60;UBERON:0000926!1.38e-09!448;UBERON:0004120!1.38e-09!448;UBERON:0006603!1.38e-09!448;UBERON:0001986!2.47e-09!18;UBERON:0004638!2.47e-09!18;UBERON:0004852!2.47e-09!18;UBERON:0002193!1.87e-08!112;UBERON:0000487!7.87e-08!22;UBERON:0006914!2.66e-07!25;UBERON:0001637!5.65e-07!42;UBERON:0003509!5.65e-07!42;UBERON:0004572!5.65e-07!42;UBERON:0000178!6.28e-07!15;UBERON:0000179!6.28e-07!15;UBERON:0000463!6.28e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;3.11e-12;18!UBERON:0001986;3.11e-12;18!UBERON:0004852;3.11e-12;18!UBERON:0000055;7.96e-10;65!UBERON:0000178;5.07e-09;15!UBERON:0000179;5.07e-09;15!UBERON:0000463;5.07e-09;15!UBERON:0000487;5.96e-09;22!UBERON:0006914;4.04e-08;25!UBERON:0003915;8.69e-08;9!UBERON:0004700;8.69e-08;9!UBERON:0001917;8.69e-08;9!UBERON:0001473;1.01e-07;8!UBERON:0004536;1.01e-07;8!UBERON:0006558;1.01e-07;8!UBERON:0004535;1.27e-07;109!UBERON:0001009;1.63e-07;112!UBERON:0002193;1.69e-07;42!UBERON:0007500;2.81e-07;56!UBERON:0001981;2.81e-07;56!UBERON:0004537;2.81e-07;56 | |||
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| ||
|short_description=p5@MYL12A | |short_description=p5@MYL12A | ||
}} | }} |
Latest revision as of 07:51, 19 September 2015
Short description: | p5@MYL12A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYL12A_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -232bp_to_ENST00000217652, NM_006471, uc002klr.2_5end |
EntrezGene: | MYL12A |
HGNC: | 16701 |
UniProt: | P19105Q53X45 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.36e-17 | 24 |
endothelial cell | 5.55e-15 | 36 |
meso-epithelial cell | 1.72e-13 | 45 |
blood vessel endothelial cell | 1.39e-12 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.39e-12 | 18 |
lining cell | 5.64e-10 | 58 |
barrier cell | 5.64e-10 | 58 |
endothelial cell of artery | 5.69e-08 | 9 |