FFCP PHASE1:Hg19::chr19:50015870..50015934,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2217 | |EntrezGene=2217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3621 | |HGNC=3621 | ||
|TSSclassifier=strong | |||
|UniProt=P55899 | |UniProt=P55899 | ||
|association_with_transcript=334bp_to_ENST00000221466,NM_001136019,uc002pod.2,uc002poe.2_5end | |association_with_transcript=334bp_to_ENST00000221466,NM_001136019,uc002pod.2,uc002poe.2_5end | ||
|cluster_id=chr19:50015870..50015934,+ | |||
|coexpression_cluster_id=C3812 | |||
|description=CAGE_peak_2_at_FCGRT_5end | |description=CAGE_peak_2_at_FCGRT_5end | ||
|id=chr19:50015870..50015934,+ | |id=chr19:50015870..50015934,+ | ||
|ontology_enrichment_celltype=CL:0002009!4.87e-27!65;CL:0000766!8.70e-27!76;CL:0002194!7.07e-26!63;CL:0000576!7.07e-26!63;CL:0000040!7.07e-26!63;CL:0000559!7.07e-26!63;CL:0002057!5.59e-25!42;CL:0000557!1.91e-23!71;CL:0000839!7.28e-21!70;CL:0000860!1.30e-20!45;CL:0000048!8.16e-13!430;CL:0000763!2.07e-12!112;CL:0000049!2.07e-12!112;CL:0000723!7.49e-12!436;CL:0002320!7.72e-11!365;CL:0000034!8.28e-11!444;CL:0000134!1.70e-09!358 | |ontology_enrichment_celltype=CL:0002009!4.87e-27!65;CL:0000766!8.70e-27!76;CL:0002194!7.07e-26!63;CL:0000576!7.07e-26!63;CL:0000040!7.07e-26!63;CL:0000559!7.07e-26!63;CL:0002057!5.59e-25!42;CL:0000557!1.91e-23!71;CL:0000839!7.28e-21!70;CL:0000860!1.30e-20!45;CL:0000048!8.16e-13!430;CL:0000763!2.07e-12!112;CL:0000049!2.07e-12!112;CL:0000723!7.49e-12!436;CL:0002320!7.72e-11!365;CL:0000034!8.28e-11!444;CL:0000134!1.70e-09!358 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.68e-18;39!CL:0000234;1.68e-18;39!CL:0000860;3.67e-18;33!CL:0002057;3.67e-18;33!CL:0000576;3.42e-17;48!CL:0000766;3.94e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,4.74e-31,61;CL:0000766,1.94e-30,72;CL:0002194,7.52e-30,59;CL:0000576,7.52e-30,59;CL:0000040,7.52e-30,59;CL:0000559,7.52e-30,59;CL:0000473,4.34e-29,48;CL:0000234,4.34e-29,48;CL:0000557,6.39e-27,67;CL:0000860,4.01e-25,42;CL:0002057,4.01e-25,42;CL:0000839,4.34e-24,66;CL:0000048,6.28e-15,427;CL:0000763,4.20e-14,108;CL:0000049,4.20e-14,108;CL:0000723,7.53e-14,433;CL:0000034,1.06e-12,441;CL:0002320,1.30e-12,361;CL:0000134,3.78e-11,354;CL:0000219,5.77e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;3.25e-18;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!4.34e-31!216;UBERON:0002204!1.00e-24!167;UBERON:0002390!2.58e-21!102;UBERON:0003061!2.58e-21!102;UBERON:0000926!3.97e-21!448;UBERON:0004120!3.97e-21!448;UBERON:0006603!3.97e-21!448;UBERON:0002371!4.83e-21!80;UBERON:0002193!9.65e-21!112;UBERON:0001474!1.28e-19!86;UBERON:0004765!2.52e-18!101;UBERON:0001434!2.52e-18!101;UBERON:0002405!8.20e-17!115;UBERON:0000468!2.93e-14!659;UBERON:0000467!1.90e-11!625;UBERON:0000480!3.51e-11!626;UBERON:0002050!3.74e-11!605;UBERON:0005423!3.74e-11!605;UBERON:0000923!7.00e-11!604;UBERON:0005291!7.00e-11!604;UBERON:0006598!7.00e-11!604;UBERON:0002532!7.00e-11!604;UBERON:0000922!1.01e-10!612;UBERON:0002384!1.74e-10!375;UBERON:0001009!2.09e-10!113;UBERON:0004535!4.43e-10!110;UBERON:0000479!2.07e-09!787;UBERON:0004872!8.20e-08!84 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,2.16e-35,203;UBERON:0000926,1.89e-34,315;UBERON:0004120,1.89e-34,315;UBERON:0006603,1.89e-34,315;UBERON:0002204,9.34e-28,167;UBERON:0002390,3.89e-24,98;UBERON:0003061,3.89e-24,98;UBERON:0002371,4.36e-24,76;UBERON:0002193,2.36e-23,108;UBERON:0001474,2.97e-22,82;UBERON:0004765,1.14e-21,90;UBERON:0001434,2.37e-21,100;UBERON:0002405,4.29e-20,93;UBERON:0000923,3.19e-12,560;UBERON:0010316,3.19e-12,560;UBERON:0005291,3.19e-12,560;UBERON:0006598,3.19e-12,560;UBERON:0010317,3.19e-12,560;UBERON:0002532,3.19e-12,560;UBERON:0002384,3.77e-12,371;UBERON:0002050,5.00e-12,564;UBERON:0000479,6.87e-11,773;UBERON:0005423,1.84e-10,581;UBERON:0001009,2.69e-10,112;UBERON:0000922,4.68e-10,592;UBERON:0004535,5.70e-10,109;UBERON:0004872,1.13e-07,83 | |||
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| ||
|short_description=p2@FCGRT | |short_description=p2@FCGRT | ||
}} | }} |
Latest revision as of 07:55, 19 September 2015
Short description: | p2@FCGRT |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FCGRT_5end |
Coexpression cluster: | C3812_Eosinophils_Macrophage_CD14_Monocytederived_Neutrophils_Mesenchymal_CD14CD16 |
Association with transcript: | 334bp_to_ENST00000221466, NM_001136019, uc002pod.2, uc002poe.2_5end |
EntrezGene: | FCGRT |
HGNC: | 3621 |
UniProt: | P55899 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 4.74e-31 | 61 |
myeloid leukocyte | 1.94e-30 | 72 |
monopoietic cell | 7.52e-30 | 59 |
monocyte | 7.52e-30 | 59 |
monoblast | 7.52e-30 | 59 |
promonocyte | 7.52e-30 | 59 |
defensive cell | 4.34e-29 | 48 |
phagocyte | 4.34e-29 | 48 |
granulocyte monocyte progenitor cell | 6.39e-27 | 67 |
classical monocyte | 4.01e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.01e-25 | 42 |
myeloid lineage restricted progenitor cell | 4.34e-24 | 66 |
multi fate stem cell | 6.28e-15 | 427 |
myeloid cell | 4.20e-14 | 108 |
common myeloid progenitor | 4.20e-14 | 108 |
somatic stem cell | 7.53e-14 | 433 |
stem cell | 1.06e-12 | 441 |
connective tissue cell | 1.30e-12 | 361 |
mesenchymal cell | 3.78e-11 | 354 |
motile cell | 5.77e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 2.16e-35 | 203 |
mesoderm | 1.89e-34 | 315 |
mesoderm-derived structure | 1.89e-34 | 315 |
presumptive mesoderm | 1.89e-34 | 315 |
musculoskeletal system | 9.34e-28 | 167 |
hematopoietic system | 3.89e-24 | 98 |
blood island | 3.89e-24 | 98 |
bone marrow | 4.36e-24 | 76 |
hemolymphoid system | 2.36e-23 | 108 |
bone element | 2.97e-22 | 82 |
skeletal element | 1.14e-21 | 90 |
skeletal system | 2.37e-21 | 100 |
immune system | 4.29e-20 | 93 |
germ layer | 3.19e-12 | 560 |
germ layer / neural crest | 3.19e-12 | 560 |
embryonic tissue | 3.19e-12 | 560 |
presumptive structure | 3.19e-12 | 560 |
germ layer / neural crest derived structure | 3.19e-12 | 560 |
epiblast (generic) | 3.19e-12 | 560 |
connective tissue | 3.77e-12 | 371 |
embryonic structure | 5.00e-12 | 564 |
tissue | 6.87e-11 | 773 |
developing anatomical structure | 1.84e-10 | 581 |
circulatory system | 2.69e-10 | 112 |
embryo | 4.68e-10 | 592 |
cardiovascular system | 5.70e-10 | 109 |
splanchnic layer of lateral plate mesoderm | 1.13e-07 | 83 |