FFCP PHASE1:Hg19::chr2:198299726..198299776,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:198299726..198299776,-
|short_description=p1@SF3B1
|description=CAGE_peak_1_at_SF3B1_5end
|association_with_transcript=0bp_to_ENST00000409915,ENST000004141...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23451 | |EntrezGene=23451 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10768 | |HGNC=10768 | ||
|TSSclassifier=strong | |||
|UniProt=E9PCH3,F8WC19,A0JLT9,O75533,Q7Z497 | |UniProt=E9PCH3,F8WC19,A0JLT9,O75533,Q7Z497 | ||
|association_with_transcript=0bp_to_ENST00000409915,ENST00000414174,NM_001005526,NM_012433,uc002uue.2,uc002uuf.2,uc002uug.2,uc010fsk.1_5end | |||
|cluster_id=chr2:198299726..198299776,- | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_SF3B1_5end | |||
|id=chr2:198299726..198299776,- | |||
|ontology_enrichment_celltype=CL:0000738!3.36e-42!140;CL:0000037!1.94e-39!172;CL:0000566!1.94e-39!172;CL:0002032!6.01e-37!165;CL:0000837!6.01e-37!165;CL:0000988!4.05e-35!182;CL:0002031!5.92e-34!124;CL:0002087!9.18e-32!119;CL:0000766!3.08e-21!76;CL:0000763!2.65e-20!112;CL:0000049!2.65e-20!112;CL:0000557!3.04e-18!71;CL:0000839!1.08e-17!70;CL:0002057!4.09e-17!42;CL:0000542!1.12e-15!53;CL:0000051!1.12e-15!53;CL:0000860!2.64e-15!45;CL:0000838!3.14e-15!52;CL:0002009!3.29e-15!65;CL:0002194!1.24e-14!63;CL:0000576!1.24e-14!63;CL:0000040!1.24e-14!63;CL:0000559!1.24e-14!63;CL:0000791!1.19e-09!18;CL:0000789!1.19e-09!18;CL:0002420!1.19e-09!18;CL:0002419!1.19e-09!18;CL:0000790!1.19e-09!18;CL:0000134!2.15e-08!358;CL:0000084!6.84e-08!25;CL:0000827!6.84e-08!25;CL:0000219!9.81e-08!390;CL:0000625!2.48e-07!11;CL:0000945!2.80e-07!24;CL:0000826!2.80e-07!24;CL:0002320!3.59e-07!365;CL:0000236!9.97e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.48e-14;33!CL:0002057;1.48e-14;33!CL:0000576;1.60e-12;48!CL:0002087;1.05e-11;104!CL:0000473;1.16e-10;39!CL:0000234;1.16e-10;39!CL:0000766;2.04e-10;69!CL:0000791;1.21e-09;18!CL:0000789;1.21e-09;18!CL:0002419;1.21e-09;18!CL:0000738;2.41e-09;136!CL:0000542;2.61e-09;53!CL:0000084;6.94e-08;25!CL:0000988;1.61e-07;177!CL:0000625;2.50e-07;11!CL:0000945;2.83e-07;24!CL:0000236;7.84e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,1.54e-44,136;CL:0000037,2.43e-41,168;CL:0002032,8.04e-39,161;CL:0000837,8.04e-39,161;CL:0000988,1.05e-37,177;CL:0002031,3.80e-36,120;CL:0002087,6.42e-34,115;CL:0000766,1.71e-23,72;CL:0000763,6.28e-22,108;CL:0000049,6.28e-22,108;CL:0000557,2.33e-20,67;CL:0000839,8.76e-20,66;CL:0002009,3.53e-17,61;CL:0000860,4.09e-17,42;CL:0002057,4.09e-17,42;CL:0002194,1.37e-16,59;CL:0000576,1.37e-16,59;CL:0000040,1.37e-16,59;CL:0000559,1.37e-16,59;CL:0000542,1.12e-15,53;CL:0000051,1.12e-15,53;CL:0000473,2.81e-15,48;CL:0000234,2.81e-15,48;CL:0000838,3.14e-15,52;CL:0000791,1.19e-09,18;CL:0000789,1.19e-09,18;CL:0002420,1.19e-09,18;CL:0002419,1.19e-09,18;CL:0000790,1.19e-09,18;CL:0000134,5.73e-09,354;CL:0000219,2.89e-08,386;CL:0000084,6.84e-08,25;CL:0000827,6.84e-08,25;CL:0002320,1.09e-07,361;CL:0000625,2.48e-07,11;CL:0000945,2.80e-07,24;CL:0000826,2.80e-07,24;CL:0000236,9.97e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-12;42!CL:0000790;1.21e-09;18!CL:0000051;2.61e-09;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.35e-21!102;UBERON:0003061!2.35e-21!102;UBERON:0002193!3.93e-19!112;UBERON:0001474!2.69e-15!86;UBERON:0002371!9.39e-15!80;UBERON:0002405!6.80e-12!115;UBERON:0004765!1.72e-11!101;UBERON:0001434!1.72e-11!101;UBERON:0002384!3.74e-07!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.66e-23,98;UBERON:0003061,3.66e-23,98;UBERON:0002193,1.09e-20,108;UBERON:0001474,6.74e-17,82;UBERON:0002371,2.14e-16,76;UBERON:0002405,3.46e-16,93;UBERON:0004765,1.81e-13,90;UBERON:0001434,1.65e-11,100;UBERON:0002384,1.15e-07,371 | |||
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| ||
|short_description=p1@SF3B1 | |||
}} | }} |
Latest revision as of 07:59, 19 September 2015
Short description: | p1@SF3B1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SF3B1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000409915, ENST00000414174, NM_001005526, NM_012433, uc002uue.2, uc002uuf.2, uc002uug.2, uc010fsk.1_5end |
EntrezGene: | SF3B1 |
HGNC: | 10768 |
UniProt: | E9PCH3F8WC19A0JLT9O75533Q7Z497 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.66e-23 | 98 |
blood island | 3.66e-23 | 98 |
hemolymphoid system | 1.09e-20 | 108 |
bone element | 6.74e-17 | 82 |
bone marrow | 2.14e-16 | 76 |
immune system | 3.46e-16 | 93 |
skeletal element | 1.81e-13 | 90 |
skeletal system | 1.65e-11 | 100 |
connective tissue | 1.15e-07 | 371 |