FFCP PHASE1:Hg19::chr22:23484246..23484283,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr22:23484246..23484283,-
|short_description=p1@RTDR1
|description=CAGE_peak_1_at_RTDR1_5end
|association_with_transcript=0bp_to_ENST00000216036_5end
|EntrezG...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27156 | |EntrezGene=27156 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13437 | |HGNC=13437 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHP6 | |UniProt=Q9UHP6 | ||
|association_with_transcript=0bp_to_ENST00000216036_5end | |||
|cluster_id=chr22:23484246..23484283,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_RTDR1_5end | |||
|id=chr22:23484246..23484283,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;4.75e-10;82!UBERON:0010122;6.89e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.72e-33!57;UBERON:0005068!7.72e-33!57;UBERON:0006241!7.72e-33!57;UBERON:0007135!7.72e-33!57;UBERON:0000073!9.63e-30!94;UBERON:0001016!9.63e-30!94;UBERON:0003075!2.11e-29!86;UBERON:0007284!2.11e-29!86;UBERON:0001017!6.43e-29!82;UBERON:0005743!8.87e-29!86;UBERON:0002346!3.21e-28!90;UBERON:0002780!3.30e-27!41;UBERON:0001890!3.30e-27!41;UBERON:0006240!3.30e-27!41;UBERON:0007023!1.06e-26!115;UBERON:0001869!1.19e-26!32;UBERON:0002616!1.59e-26!59;UBERON:0003080!3.48e-26!42;UBERON:0002020!4.28e-26!34;UBERON:0003528!4.28e-26!34;UBERON:0001893!4.88e-26!34;UBERON:0000955!3.02e-25!69;UBERON:0006238!3.02e-25!69;UBERON:0002791!4.92e-25!33;UBERON:0003056!9.81e-23!61;UBERON:0002619!2.06e-20!22;UBERON:0000956!3.80e-20!25;UBERON:0000203!3.80e-20!25;UBERON:0000153!1.05e-18!129;UBERON:0007811!1.05e-18!129;UBERON:0001950!1.16e-18!20;UBERON:0004121!1.56e-18!169;UBERON:0000924!3.50e-18!173;UBERON:0006601!3.50e-18!173;UBERON:0000033!3.57e-18!123;UBERON:0003076!7.63e-08!15;UBERON:0003057!7.63e-08!15;UBERON:0000483!1.02e-07!309;UBERON:0000119!1.22e-07!312;UBERON:0000025!1.84e-07!194;UBERON:0000481!2.12e-07!347;UBERON:0002308!2.21e-07!9;UBERON:0000125!2.21e-07!9;UBERON:0000200!2.39e-07!6;UBERON:0002420!3.29e-07!9;UBERON:0007245!3.29e-07!9;UBERON:0010009!3.29e-07!9;UBERON:0010011!3.29e-07!9;UBERON:0000454!3.29e-07!9;UBERON:0000475!4.07e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.85e-53;32!UBERON:0003528;2.50e-52;34!UBERON:0002020;2.50e-52;34!UBERON:0002619;3.33e-51;22!UBERON:0002791;2.18e-49;32!UBERON:0001893;3.50e-48;34!UBERON:0001950;7.31e-46;20!UBERON:0000956;1.21e-44;25!UBERON:0000203;1.21e-44;25!UBERON:0002780;4.88e-38;41!UBERON:0001890;4.88e-38;41!UBERON:0000073;4.09e-29;53!UBERON:0002616;4.09e-29;53!UBERON:0000955;8.40e-25;68!UBERON:0001017;1.57e-24;75!UBERON:0000200;1.69e-19;6!UBERON:0000125;7.86e-17;9!UBERON:0002308;7.86e-17;9!UBERON:0001872;1.97e-16;5!UBERON:0001016;3.40e-16;83!UBERON:0002021;9.50e-16;5!UBERON:0000369;4.98e-14;4!UBERON:0002435;4.98e-14;4!UBERON:0000204;4.98e-14;4!UBERON:0007023;2.33e-13;114!UBERON:0009663;4.87e-12;7!UBERON:0002298;8.93e-12;6!UBERON:0005383;5.01e-11;3!UBERON:0005382;5.01e-11;3!UBERON:0001870;1.12e-10;3!UBERON:0002420;2.91e-09;9!UBERON:0007245;2.91e-09;9!UBERON:0010009;2.91e-09;9!UBERON:0010011;2.91e-09;9!UBERON:0000454;2.91e-09;9!UBERON:0000988;3.47e-09;3!UBERON:0001873;6.89e-08;2!UBERON:0001871;1.16e-07;6!UBERON:0002702;1.18e-07;2!UBERON:0002771;2.74e-07;2!UBERON:0011216;3.36e-07;132!UBERON:0001954;5.65e-07;2!UBERON:0003022;5.65e-07;2!UBERON:0002421;5.65e-07;2!UBERON:0002600;5.65e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003528,1.69e-60,34;UBERON:0002020,1.69e-60,34;UBERON:0001869,1.77e-60,32;UBERON:0001893,1.36e-56,34;UBERON:0001017,1.42e-56,81;UBERON:0000073,1.12e-55,53;UBERON:0002616,1.12e-55,53;UBERON:0001049,1.51e-55,56;UBERON:0005068,1.51e-55,56;UBERON:0006241,1.51e-55,56;UBERON:0007135,1.51e-55,56;UBERON:0002791,1.64e-55,32;UBERON:0002780,3.61e-53,41;UBERON:0001890,3.61e-53,41;UBERON:0003080,3.61e-53,41;UBERON:0006240,3.61e-53,41;UBERON:0002619,2.34e-51,22;UBERON:0001016,5.87e-50,89;UBERON:0000955,1.01e-49,68;UBERON:0006238,1.01e-49,68;UBERON:0001950,5.80e-46,20;UBERON:0000956,8.91e-45,25;UBERON:0000203,8.91e-45,25;UBERON:0007023,1.39e-39,114;UBERON:0003075,3.22e-35,82;UBERON:0007284,3.22e-35,82;UBERON:0003056,1.85e-33,61;UBERON:0002346,3.57e-33,86;UBERON:0010371,6.50e-26,104;UBERON:0010314,2.09e-21,132;UBERON:0004121,2.79e-21,171;UBERON:0000924,2.79e-21,171;UBERON:0006601,2.79e-21,171;UBERON:0011216,3.24e-21,223;UBERON:0000200,2.10e-19,6;UBERON:0000125,8.40e-17,9;UBERON:0002308,8.40e-17,9;UBERON:0001872,1.78e-16,5;UBERON:0002021,5.66e-16,5;UBERON:0000025,1.38e-14,192;UBERON:0000369,5.26e-14,4;UBERON:0002435,5.26e-14,4;UBERON:0000204,5.26e-14,4;UBERON:0010082,5.26e-14,4;UBERON:0009663,5.07e-12,7;UBERON:0002298,6.34e-12,6;UBERON:0005383,4.79e-11,3;UBERON:0005382,4.79e-11,3;UBERON:0001870,1.43e-10,3;UBERON:0004111,8.47e-10,240;UBERON:0002420,3.00e-09,9;UBERON:0007245,3.00e-09,9;UBERON:0010009,3.00e-09,9;UBERON:0010011,3.00e-09,9;UBERON:0000454,3.00e-09,9;UBERON:0000988,3.23e-09,3;UBERON:0001873,6.48e-08,2;UBERON:0010122,6.48e-08,2;UBERON:0001871,1.26e-07,6;UBERON:0002702,1.46e-07,2;UBERON:0002771,2.74e-07,2;UBERON:0001954,4.94e-07,2;UBERON:0003022,4.94e-07,2;UBERON:0002421,4.94e-07,2;UBERON:0002600,4.94e-07,2;UBERON:0005423,8.81e-07,581 | |||
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| ||
|short_description=p1@RTDR1 | |||
}} | }} |
Latest revision as of 08:40, 19 September 2015
Short description: | p1@RTDR1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RTDR1_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000216036_5end |
EntrezGene: | RTDR1 |
HGNC: | 13437 |
UniProt: | Q9UHP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data