FFCP PHASE1:Hg19::chr1:81771878..81771897,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:81771878..81771897,+ to FFCP PHASE1:Hg19::chr1:81771878..81771897,+: NSchange) |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23266 | |EntrezGene=23266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18582 | |HGNC=18582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000469377_5end | |||
|cluster_id=chr1:81771878..81771897,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_LPHN2_5end | |||
|id=chr1:81771878..81771897,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.56e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.42e-45!115;UBERON:0002780!6.43e-41!41;UBERON:0001890!6.43e-41!41;UBERON:0006240!6.43e-41!41;UBERON:0002619!1.05e-40!22;UBERON:0001869!5.31e-40!32;UBERON:0003080!1.07e-39!42;UBERON:0001893!1.51e-39!34;UBERON:0002020!1.69e-39!34;UBERON:0003528!1.69e-39!34;UBERON:0001049!5.33e-38!57;UBERON:0005068!5.33e-38!57;UBERON:0006241!5.33e-38!57;UBERON:0007135!5.33e-38!57;UBERON:0002791!6.78e-38!33;UBERON:0001950!1.85e-37!20;UBERON:0001017!1.28e-36!82;UBERON:0005743!6.44e-36!86;UBERON:0000956!4.68e-35!25;UBERON:0000203!4.68e-35!25;UBERON:0000073!6.10e-34!94;UBERON:0001016!6.10e-34!94;UBERON:0000955!2.01e-32!69;UBERON:0006238!2.01e-32!69;UBERON:0002616!3.29e-32!59;UBERON:0003075!3.01e-31!86;UBERON:0007284!3.01e-31!86;UBERON:0002346!3.19e-29!90;UBERON:0003056!2.91e-27!61;UBERON:0004121!3.13e-18!169;UBERON:0000153!5.64e-18!129;UBERON:0007811!5.64e-18!129;UBERON:0000033!1.45e-17!123;UBERON:0000924!1.92e-17!173;UBERON:0006601!1.92e-17!173;UBERON:0001871!3.45e-15!7;UBERON:0000025!3.79e-13!194;UBERON:0000200!5.60e-12!6;UBERON:0001872!2.67e-10!5;UBERON:0000349!5.24e-10!5;UBERON:0002021!6.28e-10!5;UBERON:0000481!8.84e-10!347;UBERON:0000062!1.81e-09!511;UBERON:0004111!2.36e-09!241;UBERON:0000477!5.99e-09!286;UBERON:0000064!1.25e-08!219;UBERON:0000369!5.01e-08!4;UBERON:0002435!5.01e-08!4;UBERON:0000204!5.01e-08!4;UBERON:0010082!5.01e-08!4;UBERON:0002420!2.45e-07!9;UBERON:0007245!2.45e-07!9;UBERON:0010009!2.45e-07!9;UBERON:0010011!2.45e-07!9;UBERON:0000454!2.45e-07!9;UBERON:0000483!4.81e-07!309;UBERON:0000922!4.98e-07!612;UBERON:0002771!7.44e-07!3;UBERON:0000119!7.80e-07!312 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;7.31e-86;22!UBERON:0001950;6.82e-79;20!UBERON:0000956;2.91e-75;25!UBERON:0000203;2.91e-75;25!UBERON:0001869;2.81e-72;32!UBERON:0002791;2.01e-67;32!UBERON:0001893;4.22e-65;34!UBERON:0003528;1.80e-61;34!UBERON:0002020;1.80e-61;34!UBERON:0002780;1.32e-44;41!UBERON:0001890;1.32e-44;41!UBERON:0001871;5.33e-27;6!UBERON:0000073;3.40e-26;53!UBERON:0002616;3.40e-26;53!UBERON:0000200;7.13e-24;6!UBERON:0001017;3.87e-21;75!UBERON:0000955;6.36e-21;68!UBERON:0001872;2.18e-20;5!UBERON:0002021;1.51e-19;5!UBERON:0000349;1.51e-19;5!UBERON:0001016;4.10e-15;83!UBERON:0001870;8.77e-13;3!UBERON:0002420;6.02e-11;9!UBERON:0007245;6.02e-11;9!UBERON:0010009;6.02e-11;9!UBERON:0010011;6.02e-11;9!UBERON:0000454;6.02e-11;9!UBERON:0000369;1.74e-09;4!UBERON:0002435;1.74e-09;4!UBERON:0000204;1.74e-09;4!UBERON:0002771;3.04e-09;2!UBERON:0001876;3.49e-09;2!UBERON:0002702;3.49e-09;2!UBERON:0011216;6.41e-09;132!UBERON:0001954;1.70e-08;2!UBERON:0003022;1.70e-08;2!UBERON:0002421;1.70e-08;2!UBERON:0002600;1.70e-08;2!UBERON:0000922;2.26e-08;49!UBERON:0007023;5.06e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,7.85e-86,22;UBERON:0001869,4.96e-81,32;UBERON:0001950,8.24e-79,20;UBERON:0001893,5.30e-76,34;UBERON:0000956,3.10e-75,25;UBERON:0000203,3.10e-75,25;UBERON:0002791,6.75e-75,32;UBERON:0003528,3.12e-70,34;UBERON:0002020,3.12e-70,34;UBERON:0002780,3.57e-62,41;UBERON:0001890,3.57e-62,41;UBERON:0003080,3.57e-62,41;UBERON:0006240,3.57e-62,41;UBERON:0001049,2.25e-47,56;UBERON:0005068,2.25e-47,56;UBERON:0006241,2.25e-47,56;UBERON:0007135,2.25e-47,56;UBERON:0000073,8.26e-47,53;UBERON:0002616,8.26e-47,53;UBERON:0000955,1.86e-43,68;UBERON:0006238,1.86e-43,68;UBERON:0001017,9.47e-41,81;UBERON:0003056,7.13e-40,61;UBERON:0001016,5.51e-36,89;UBERON:0003075,1.05e-32,82;UBERON:0007284,1.05e-32,82;UBERON:0002346,7.28e-31,86;UBERON:0007023,3.14e-29,114;UBERON:0001871,3.84e-27,6;UBERON:0010314,9.50e-26,132;UBERON:0010371,2.52e-24,104;UBERON:0000200,7.58e-24,6;UBERON:0011216,2.27e-22,223;UBERON:0001872,3.00e-20,5;UBERON:0000349,1.27e-19,5;UBERON:0002021,1.87e-19,5;UBERON:0000025,6.17e-19,192;UBERON:0004121,7.65e-18,171;UBERON:0000924,7.65e-18,171;UBERON:0006601,7.65e-18,171;UBERON:0004111,1.83e-14,240;UBERON:0001870,8.96e-13,3;UBERON:0002420,5.97e-11,9;UBERON:0007245,5.97e-11,9;UBERON:0010009,5.97e-11,9;UBERON:0010011,5.97e-11,9;UBERON:0000454,5.97e-11,9;UBERON:0000483,3.03e-10,306;UBERON:0000119,4.63e-10,309;UBERON:0000369,2.02e-09,4;UBERON:0002435,2.02e-09,4;UBERON:0000204,2.02e-09,4;UBERON:0010082,2.02e-09,4;UBERON:0002771,2.81e-09,2;UBERON:0001876,2.81e-09,2;UBERON:0002702,3.57e-09,2;UBERON:0001954,1.52e-08,2;UBERON:0003022,1.52e-08,2;UBERON:0002421,1.52e-08,2;UBERON:0002600,1.52e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66523227842587,0,0,0,0.166849141711909,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,7.95318118213038,3.65740482667333,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,2.90799823828566,2.50473865036998,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,3.0149109656352,0,0,0,2.63262476584767,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.707660516026713,0.611030144933625,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,1.20990716048664,4.89716418608784,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.80784592624426,0,0,3.48209377757333,0,0,0,0,0,0.229073192331831,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.687481272035051,0.717873024576814,0.998395002494955,0.429226048136571,0,1.20930250476107,0,0,0,0,0,0,0,3.18091875923721,1.90684768556206,0.160753148465019,0,0.415440338029185,0,0,5.89270699582839,0,0.236417121897595,0.104909176269996,0,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,0,0,0,0.439656701034247,0,0.904980694530854,0.26446520348538,0,0,1.38823636338003,8.96064539068096,3.72815149812476,0.496166021811951,0,0,0,0,0,0,0,0,7.08854543973589,10.3722325166669,3.505346059782,0,0,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,3.594719339945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,3.14723202972652,5.6678630530234,2.39450788585727,7.38418911266718,3.02486035466062,1.72893131160545,4.03689114079628,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,3.44441681553813,4.68646859168308,5.37385670903079,3.10737469950143,12.0334457984008,2.19303106742873,0.496211178389294,0,0,0,0,0.606965604236632,0.91064876540519,0,0,0,0.135939465953663,3.3544114517053,0,0,0.39246546425257,3.77077415798405,0,3.65263488203798,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0.795803100645473,2.97300226943921,0,0,0,0.385870790539723,1.5299169235277,0,0,0,0,0.594092800654172,1.2679671827502,0,0.939839179798536,1.74036297528658,0,0,0,0,0.730336388246517,0,0,0,2.99162556840025,6.54526035510566,0,0,0,0,0.252332849670158,0.218531143927391,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0.714193294391221,0,0.0620747142958579,0,2.03670906490128,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0.0898252021065869,0,0,0.813792356631477,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.311211035399766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.397589304964456,0.348581828608555,0,0,1.09493207722749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.837581326671744,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0.0915694648183434,0.082509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.66523227842587,0,0,0,0.166849141711909,0,0,0,0,0,1.4098700508785,0,0,0,0,0,0,0,0,7.95318118213038,3.65740482667333,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,2.90799823828566,2.50473865036998,3.99227596002388,0,0,0,0,0,0,0.689486746482929,0,0,0.885741385813839,3.0149109656352,0,0,0,2.63262476584767,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216388639742091,0,0.707660516026713,0.611030144933625,0,0,0,0.067401132980677,0,0.468528891450678,0,0,0,0,1.20990716048664,4.89716418608784,0.252746318513952,0,0,0,0,0,0,0,0,0,0,0,0.52418000472609,0,0,0,0,0,0,1.80784592624426,0,0,3.48209377757333,0,0,0,0,0,0.229073192331831,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,1.95497680890578,0.687481272035051,0.717873024576814,0.998395002494955,0.429226048136571,0,1.20930250476107,0,0,0,0,0,0,0,3.18091875923721,1.90684768556206,0.160753148465019,0,0.415440338029185,0,0,5.89270699582839,0,0.236417121897595,0.104909176269996,0,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,0,0,0,0.439656701034247,0,0.904980694530854,0.26446520348538,0,0,1.38823636338003,8.96064539068096,3.72815149812476,0.496166021811951,0,0,0,0,0,0,0,0,7.08854543973589,10.3722325166669,3.505346059782,0,0,0.310482014706917,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,3.594719339945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107824811396682,0,0.109209638192014,0,0,0,0,0,0,0,0,0,3.14723202972652,5.6678630530234,2.39450788585727,7.38418911266718,3.02486035466062,1.72893131160545,4.03689114079628,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,3.44441681553813,4.68646859168308,5.37385670903079,3.10737469950143,12.0334457984008,2.19303106742873,0.496211178389294,0,0,0,0,0.606965604236632,0.91064876540519,0,0,0,0.135939465953663,3.3544114517053,0,0,0.39246546425257,3.77077415798405,0,3.65263488203798,0,0,0.500335809236594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0.795803100645473,2.97300226943921,0,0,0,0.385870790539723,1.5299169235277,0,0,0,0,0.594092800654172,1.2679671827502,0,0.939839179798536,1.74036297528658,0,0,0,0,0.730336388246517,0,0,0,2.99162556840025,6.54526035510566,0,0,0,0,0.252332849670158,0.218531143927391,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.517164979309476,0,0.714193294391221,0,0.0620747142958579,0,2.03670906490128,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0.0898252021065869,0,0,0.813792356631477,0,0,0 | ||
|short_description=p6@LPHN2 | |||
}} | }} |
Latest revision as of 09:47, 19 September 2015
Short description: | p6@LPHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LPHN2_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000469377_5end |
EntrezGene: | LPHN2 |
HGNC: | 18582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data