FFCP PHASE1:Hg19::chr1:81771982..81771993,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23266 | |EntrezGene=23266 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18582 | |HGNC=18582 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=98bp_to_ENST00000469377_5end | |association_with_transcript=98bp_to_ENST00000469377_5end | ||
|cluster_id=chr1:81771982..81771993,+ | |||
|description=CAGE_peak_14_at_LPHN2_5end | |description=CAGE_peak_14_at_LPHN2_5end | ||
|id=chr1:81771982..81771993,+ | |id=chr1:81771982..81771993,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.53e-16;1!UBERON:0010227;1.53e-16;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002619!1.13e-36!22;UBERON:0001950!8.96e-36!20;UBERON:0001869!5.90e-34!32;UBERON:0000956!6.65e-32!25;UBERON:0000203!6.65e-32!25;UBERON:0001893!1.07e-31!34;UBERON:0001049!7.10e-30!57;UBERON:0005068!7.10e-30!57;UBERON:0006241!7.10e-30!57;UBERON:0007135!7.10e-30!57;UBERON:0002791!2.90e-29!33;UBERON:0002780!2.46e-28!41;UBERON:0001890!2.46e-28!41;UBERON:0006240!2.46e-28!41;UBERON:0002020!2.80e-28!34;UBERON:0003528!2.80e-28!34;UBERON:0000073!4.88e-28!94;UBERON:0001016!4.88e-28!94;UBERON:0005743!7.36e-28!86;UBERON:0001017!1.35e-27!82;UBERON:0003080!1.53e-27!42;UBERON:0007023!1.42e-25!115;UBERON:0003075!2.84e-24!86;UBERON:0007284!2.84e-24!86;UBERON:0002616!5.00e-24!59;UBERON:0000955!3.83e-23!69;UBERON:0006238!3.83e-23!69;UBERON:0003056!4.48e-23!61;UBERON:0002346!7.48e-23!90;UBERON:0000200!1.58e-19!6;UBERON:0001872!7.30e-17!5;UBERON:0004121!3.69e-16!169;UBERON:0000153!4.71e-16!129;UBERON:0007811!4.71e-16!129;UBERON:0000033!6.36e-16!123;UBERON:0000924!1.41e-15!173;UBERON:0006601!1.41e-15!173;UBERON:0002771!2.37e-10!3;UBERON:0001871!8.74e-10!7;UBERON:0000025!3.72e-09!194;UBERON:0001870!7.38e-08!2;UBERON:0000064!9.68e-08!219;UBERON:0000477!6.02e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001872;6.67e-28;5!UBERON:0001870;3.27e-21;3!UBERON:0001950;4.14e-18;20!UBERON:0002619;1.52e-16;22!UBERON:0002079;1.53e-16;1!UBERON:0001831;1.53e-16;1!UBERON:0007190;1.53e-16;1!UBERON:0001567;1.53e-16;1!UBERON:0000956;1.21e-14;25!UBERON:0000203;1.21e-14;25!UBERON:0001869;2.73e-14;32!UBERON:0001893;7.34e-14;34!UBERON:0003528;2.06e-11;34!UBERON:0002791;2.06e-11;32!UBERON:0002020;2.06e-11;34!UBERON:0000200;4.15e-11;6!UBERON:0002780;7.17e-10;41!UBERON:0001890;7.17e-10;41!UBERON:0002702;6.17e-09;2!UBERON:0001829;6.17e-09;2!UBERON:0002081;6.17e-09;2!UBERON:0004089;6.17e-09;2!UBERON:0000073;1.60e-07;53!UBERON:0002616;1.60e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001872,4.83e-28,5;UBERON:0001870,3.28e-21,3;UBERON:0001950,3.65e-18,20;UBERON:0001831,1.04e-16,1;UBERON:0001567,1.04e-16,1;UBERON:0008801,1.04e-16,1;UBERON:0002619,1.36e-16,22;UBERON:0007190,1.41e-16,1;UBERON:0002079,1.65e-16,1;UBERON:0001869,2.13e-16,32;UBERON:0001893,1.88e-15,34;UBERON:0000956,1.09e-14,25;UBERON:0000203,1.09e-14,25;UBERON:0002780,7.62e-13,41;UBERON:0001890,7.62e-13,41;UBERON:0003080,7.62e-13,41;UBERON:0006240,7.62e-13,41;UBERON:0002791,1.40e-11,32;UBERON:0000200,3.22e-11,6;UBERON:0003528,6.39e-11,34;UBERON:0002020,6.39e-11,34;UBERON:0000073,6.14e-10,53;UBERON:0002616,6.14e-10,53;UBERON:0001049,2.11e-09,56;UBERON:0005068,2.11e-09,56;UBERON:0006241,2.11e-09,56;UBERON:0007135,2.11e-09,56;UBERON:0002702,4.34e-09,2;UBERON:0001829,5.08e-09,2;UBERON:0004089,5.08e-09,2;UBERON:0002081,6.42e-09,2;UBERON:0010227,6.42e-09,2;UBERON:0003056,1.27e-08,61;UBERON:0000955,1.33e-07,68;UBERON:0006238,1.33e-07,68 | |||
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| ||
|short_description=p14@LPHN2 | |short_description=p14@LPHN2 | ||
}} | }} |
Latest revision as of 09:47, 19 September 2015
Short description: | p14@LPHN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_LPHN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 98bp_to_ENST00000469377_5end |
EntrezGene: | LPHN2 |
HGNC: | 18582 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
parietal lobe | 4.83e-28 | 5 |
frontal cortex | 3.28e-21 | 3 |
neocortex | 3.65e-18 | 20 |
parotid gland | 1.04e-16 | 1 |
cheek | 1.04e-16 | 1 |
parotid gland primordium | 1.04e-16 | 1 |
regional part of cerebral cortex | 1.36e-16 | 22 |
paracentral gyrus | 1.41e-16 | 1 |
left cardiac atrium | 1.65e-16 | 1 |
cerebral hemisphere | 2.13e-16 | 32 |
telencephalon | 1.88e-15 | 34 |
cerebral cortex | 1.09e-14 | 25 |
pallium | 1.09e-14 | 25 |
regional part of forebrain | 7.62e-13 | 41 |
forebrain | 7.62e-13 | 41 |
anterior neural tube | 7.62e-13 | 41 |
future forebrain | 7.62e-13 | 41 |
regional part of telencephalon | 1.40e-11 | 32 |
gyrus | 3.22e-11 | 6 |
brain grey matter | 6.39e-11 | 34 |
gray matter | 6.39e-11 | 34 |
regional part of nervous system | 6.14e-10 | 53 |
regional part of brain | 6.14e-10 | 53 |
neural tube | 2.11e-09 | 56 |
neural rod | 2.11e-09 | 56 |
future spinal cord | 2.11e-09 | 56 |
neural keel | 2.11e-09 | 56 |
middle frontal gyrus | 4.34e-09 | 2 |
major salivary gland | 5.08e-09 | 2 |
midface | 5.08e-09 | 2 |
cardiac atrium | 6.42e-09 | 2 |
future cardiac atrium | 6.42e-09 | 2 |
pre-chordal neural plate | 1.27e-08 | 61 |
brain | 1.33e-07 | 68 |
future brain | 1.33e-07 | 68 |