FFCP PHASE1:Hg19::chr3:106959530..106959548,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=344595 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000463143,ENST00000466734,ENST00000490441,NR_028301,NR_028302,uc003dwg.3,uc010hpq.2_5end | |||
|cluster_id=chr3:106959530..106959548,+ | |||
|coexpression_cluster_id=C4260 | |||
|description=CAGE_peak_1_at_LOC344595_5end | |||
|id=chr3:106959530..106959548,+ | |||
|ontology_enrichment_celltype=CL:0000055!9.86e-09!180;CL:0000057!6.31e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.02e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.48e-34!94;UBERON:0001016!8.48e-34!94;UBERON:0004121!5.39e-33!169;UBERON:0005743!8.83e-33!86;UBERON:0001017!1.75e-32!82;UBERON:0000955!3.63e-32!69;UBERON:0006238!3.63e-32!69;UBERON:0000033!5.63e-32!123;UBERON:0000924!7.67e-32!173;UBERON:0006601!7.67e-32!173;UBERON:0001049!8.90e-32!57;UBERON:0005068!8.90e-32!57;UBERON:0006241!8.90e-32!57;UBERON:0007135!8.90e-32!57;UBERON:0002616!2.24e-30!59;UBERON:0000153!4.86e-30!129;UBERON:0007811!4.86e-30!129;UBERON:0003075!4.68e-28!86;UBERON:0007284!4.68e-28!86;UBERON:0002346!2.68e-26!90;UBERON:0002780!1.51e-25!41;UBERON:0001890!1.51e-25!41;UBERON:0006240!1.51e-25!41;UBERON:0003080!2.26e-25!42;UBERON:0003056!5.44e-23!61;UBERON:0001893!3.85e-21!34;UBERON:0002020!4.00e-21!34;UBERON:0003528!4.00e-21!34;UBERON:0002791!1.51e-20!33;UBERON:0007023!2.38e-20!115;UBERON:0000475!4.40e-20!365;UBERON:0001869!8.55e-20!32;UBERON:0000481!1.33e-16!347;UBERON:0000119!9.90e-16!312;UBERON:0000483!1.26e-15!309;UBERON:0000956!1.45e-15!25;UBERON:0000203!1.45e-15!25;UBERON:0000477!3.78e-15!286;UBERON:0002619!1.47e-14!22;UBERON:0001950!2.30e-13!20;UBERON:0004111!7.77e-13!241;UBERON:0000468!1.06e-11!659;UBERON:0000064!9.08e-11!219;UBERON:0000025!1.01e-10!194;UBERON:0002050!3.98e-10!605;UBERON:0005423!3.98e-10!605;UBERON:0000923!6.81e-10!604;UBERON:0005291!6.81e-10!604;UBERON:0006598!6.81e-10!604;UBERON:0002532!6.81e-10!604;UBERON:0000922!1.04e-09!612;UBERON:0000467!1.76e-09!625;UBERON:0000480!2.63e-09!626;UBERON:0003076!1.30e-07!15;UBERON:0003057!1.30e-07!15;UBERON:0002308!4.97e-07!9;UBERON:0000125!4.97e-07!9;UBERON:0002420!6.14e-07!9;UBERON:0007245!6.14e-07!9;UBERON:0010009!6.14e-07!9;UBERON:0010011!6.14e-07!9;UBERON:0000454!6.14e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.42e-19;41!UBERON:0001890;5.42e-19;41!UBERON:0001893;9.73e-19;34!UBERON:0003528;1.14e-18;34!UBERON:0002020;1.14e-18;34!UBERON:0002791;1.40e-18;32!UBERON:0001869;1.56e-18;32!UBERON:0000073;7.60e-18;53!UBERON:0002616;7.60e-18;53!UBERON:0000956;5.47e-16;25!UBERON:0000203;5.47e-16;25!UBERON:0002619;5.33e-15;22!UBERON:0000955;1.41e-14;68!UBERON:0001017;5.94e-14;75!UBERON:0001950;9.24e-14;20!UBERON:0001016;1.54e-12;83!UBERON:0000125;2.86e-07;9!UBERON:0002308;2.86e-07;9!UBERON:0002420;3.86e-07;9!UBERON:0007245;3.86e-07;9!UBERON:0010009;3.86e-07;9!UBERON:0010011;3.86e-07;9!UBERON:0000454;3.86e-07;9!UBERON:0011216;6.98e-07;132 | |||
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| |||
|short_description=p1@LOC344595 | |||
}} |
Latest revision as of 10:12, 19 September 2015
Short description: | p1@LOC344595 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LOC344595_5end |
Coexpression cluster: | C4260_pineal_globus_thalamus_occipital_corpus_middle_extraskeletal |
Association with transcript: | 0bp_to_ENST00000463143, ENST00000466734, ENST00000490441, NR_028301, NR_028302, uc003dwg.3, uc010hpq.2_5end |
EntrezGene: | LOC344595 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data