FFCP PHASE1:Hg19::chr17:30813708..30813721,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8851 | |EntrezGene=8851 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1775 | |HGNC=1775 | ||
|TSSclassifier=strong | |||
|UniProt=Q15078 | |UniProt=Q15078 | ||
|association_with_transcript=71bp_to_ENST00000313401_5end | |association_with_transcript=71bp_to_ENST00000313401_5end | ||
|cluster_id=chr17:30813708..30813721,+ | |||
|coexpression_cluster_id=C10 | |coexpression_cluster_id=C10 | ||
|description=CAGE_peak_8_at_CDK5R1_5end | |description=CAGE_peak_8_at_CDK5R1_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000047;2.09e-09;2!CL:0000540;2.58e-07;6!CL:0000404;2.58e-07;6!CL:0002319;8.27e-07;25 | |ontology_enrichment_celltype_v019=CL:0000047;2.09e-09;2!CL:0000540;2.58e-07;6!CL:0000404;2.58e-07;6!CL:0002319;8.27e-07;25 | ||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.06e-13,8;CL:0000540,2.61e-07,6;CL:0000031,2.61e-07,6;CL:0000404,2.61e-07,6;CL:0002319,7.90e-07,25 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.61e-08;82!CL:0000031;2.58e-07;6 | |ontology_enrichment_development_v019=UBERON:0006601;3.61e-08;82!CL:0000031;2.58e-07;6 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.60e-29!82;UBERON:0000073!6.95e-28!94;UBERON:0001016!6.95e-28!94;UBERON:0005743!1.06e-27!86;UBERON:0000955!5.47e-25!69;UBERON:0006238!5.47e-25!69;UBERON:0002780!3.95e-22!41;UBERON:0001890!3.95e-22!41;UBERON:0006240!3.95e-22!41;UBERON:0001049!8.05e-22!57;UBERON:0005068!8.05e-22!57;UBERON:0006241!8.05e-22!57;UBERON:0007135!8.05e-22!57;UBERON:0003080!3.24e-21!42;UBERON:0001893!4.38e-21!34;UBERON:0002020!7.79e-21!34;UBERON:0003528!7.79e-21!34;UBERON:0002791!3.01e-20!33;UBERON:0001869!3.11e-20!32;UBERON:0002616!1.31e-19!59;UBERON:0004121!1.97e-19!169;UBERON:0000924!9.17e-19!173;UBERON:0006601!9.17e-19!173;UBERON:0002619!1.28e-17!22;UBERON:0000956!4.77e-17!25;UBERON:0000203!4.77e-17!25;UBERON:0001950!3.91e-16!20;UBERON:0000153!1.47e-13!129;UBERON:0007811!1.47e-13!129;UBERON:0003075!1.49e-13!86;UBERON:0007284!1.49e-13!86;UBERON:0003056!1.54e-13!61;UBERON:0000033!4.19e-13!123;UBERON:0002346!1.05e-12!90;UBERON:0001871!2.51e-08!7;UBERON:0000064!2.55e-08!219 | |ontology_enrichment_uberon=UBERON:0001017!2.60e-29!82;UBERON:0000073!6.95e-28!94;UBERON:0001016!6.95e-28!94;UBERON:0005743!1.06e-27!86;UBERON:0000955!5.47e-25!69;UBERON:0006238!5.47e-25!69;UBERON:0002780!3.95e-22!41;UBERON:0001890!3.95e-22!41;UBERON:0006240!3.95e-22!41;UBERON:0001049!8.05e-22!57;UBERON:0005068!8.05e-22!57;UBERON:0006241!8.05e-22!57;UBERON:0007135!8.05e-22!57;UBERON:0003080!3.24e-21!42;UBERON:0001893!4.38e-21!34;UBERON:0002020!7.79e-21!34;UBERON:0003528!7.79e-21!34;UBERON:0002791!3.01e-20!33;UBERON:0001869!3.11e-20!32;UBERON:0002616!1.31e-19!59;UBERON:0004121!1.97e-19!169;UBERON:0000924!9.17e-19!173;UBERON:0006601!9.17e-19!173;UBERON:0002619!1.28e-17!22;UBERON:0000956!4.77e-17!25;UBERON:0000203!4.77e-17!25;UBERON:0001950!3.91e-16!20;UBERON:0000153!1.47e-13!129;UBERON:0007811!1.47e-13!129;UBERON:0003075!1.49e-13!86;UBERON:0007284!1.49e-13!86;UBERON:0003056!1.54e-13!61;UBERON:0000033!4.19e-13!123;UBERON:0002346!1.05e-12!90;UBERON:0001871!2.51e-08!7;UBERON:0000064!2.55e-08!219 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.24e-55;22!UBERON:0001950;2.42e-54;20!UBERON:0001869;3.44e-49;32!UBERON:0000956;2.49e-48;25!UBERON:0000203;2.49e-48;25!UBERON:0002791;4.47e-46;32!UBERON:0001893;1.10e-44;34!UBERON:0003528;3.73e-41;34!UBERON:0002020;3.73e-41;34!UBERON:0002780;5.96e-34;41!UBERON:0001890;5.96e-34;41!UBERON:0001871;7.66e-29;6!UBERON:0000073;2.43e-25;53!UBERON:0002616;2.43e-25;53!UBERON:0001017;2.59e-22;75!UBERON:0000955;4.35e-22;68!UBERON:0001016;1.89e-18;83!UBERON:0000200;2.81e-17;6!UBERON:0001872;5.57e-14;5!UBERON:0000349;1.34e-13;5!UBERON:0002420;2.56e-11;9!UBERON:0007245;2.56e-11;9!UBERON:0010009;2.56e-11;9!UBERON:0010011;2.56e-11;9!UBERON:0000454;2.56e-11;9!UBERON:0000369;8.54e-10;4!UBERON:0002435;8.54e-10;4!UBERON:0000204;8.54e-10;4!UBERON:0001876;2.09e-09;2!UBERON:0002771;2.80e-09;2!UBERON:0011216;6.95e-09;132!UBERON:0002021;1.77e-08;5 | |ontology_enrichment_uberon_v019=UBERON:0002619;3.24e-55;22!UBERON:0001950;2.42e-54;20!UBERON:0001869;3.44e-49;32!UBERON:0000956;2.49e-48;25!UBERON:0000203;2.49e-48;25!UBERON:0002791;4.47e-46;32!UBERON:0001893;1.10e-44;34!UBERON:0003528;3.73e-41;34!UBERON:0002020;3.73e-41;34!UBERON:0002780;5.96e-34;41!UBERON:0001890;5.96e-34;41!UBERON:0001871;7.66e-29;6!UBERON:0000073;2.43e-25;53!UBERON:0002616;2.43e-25;53!UBERON:0001017;2.59e-22;75!UBERON:0000955;4.35e-22;68!UBERON:0001016;1.89e-18;83!UBERON:0000200;2.81e-17;6!UBERON:0001872;5.57e-14;5!UBERON:0000349;1.34e-13;5!UBERON:0002420;2.56e-11;9!UBERON:0007245;2.56e-11;9!UBERON:0010009;2.56e-11;9!UBERON:0010011;2.56e-11;9!UBERON:0000454;2.56e-11;9!UBERON:0000369;8.54e-10;4!UBERON:0002435;8.54e-10;4!UBERON:0000204;8.54e-10;4!UBERON:0001876;2.09e-09;2!UBERON:0002771;2.80e-09;2!UBERON:0011216;6.95e-09;132!UBERON:0002021;1.77e-08;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.53e-56,32;UBERON:0002619,3.48e-55,22;UBERON:0001950,2.20e-54,20;UBERON:0001017,2.64e-54,81;UBERON:0001893,8.63e-53,34;UBERON:0001016,2.80e-51,89;UBERON:0002791,4.54e-51,32;UBERON:0000956,2.65e-48,25;UBERON:0000203,2.65e-48,25;UBERON:0003528,7.51e-48,34;UBERON:0002020,7.51e-48,34;UBERON:0002780,3.83e-47,41;UBERON:0001890,3.83e-47,41;UBERON:0003080,3.83e-47,41;UBERON:0006240,3.83e-47,41;UBERON:0000955,3.24e-43,68;UBERON:0006238,3.24e-43,68;UBERON:0000073,3.87e-42,53;UBERON:0002616,3.87e-42,53;UBERON:0001049,1.35e-39,56;UBERON:0005068,1.35e-39,56;UBERON:0006241,1.35e-39,56;UBERON:0007135,1.35e-39,56;UBERON:0003056,4.33e-30,61;UBERON:0004121,5.50e-30,171;UBERON:0000924,5.50e-30,171;UBERON:0006601,5.50e-30,171;UBERON:0001871,1.08e-28,6;UBERON:0003075,2.88e-25,82;UBERON:0007284,2.88e-25,82;UBERON:0002346,7.98e-24,86;UBERON:0010371,2.50e-22,104;UBERON:0011216,2.28e-18,223;UBERON:0000200,2.04e-17,6;UBERON:0010314,3.04e-16,132;UBERON:0007023,4.33e-15,114;UBERON:0001872,9.37e-14,5;UBERON:0000349,1.64e-13,5;UBERON:0002420,2.25e-11,9;UBERON:0007245,2.25e-11,9;UBERON:0010009,2.25e-11,9;UBERON:0010011,2.25e-11,9;UBERON:0000454,2.25e-11,9;UBERON:0000025,3.57e-10,192;UBERON:0000369,7.47e-10,4;UBERON:0002435,7.47e-10,4;UBERON:0000204,7.47e-10,4;UBERON:0010082,7.47e-10,4;UBERON:0001876,1.97e-09,2;UBERON:0002771,2.75e-09,2;UBERON:0002021,1.51e-08,5;UBERON:0004111,6.43e-07,240 | |||
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| ||
|short_description=p8@CDK5R1 | |short_description=p8@CDK5R1 | ||
}} | }} |
Latest revision as of 12:25, 19 September 2015
Short description: | p8@CDK5R1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CDK5R1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 71bp_to_ENST00000313401_5end |
EntrezGene: | CDK5R1 |
HGNC: | 1775 |
UniProt: | Q15078 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 1.06e-13 | 8 |
neuron | 2.61e-07 | 6 |
neuroblast | 2.61e-07 | 6 |
electrically signaling cell | 2.61e-07 | 6 |
neural cell | 7.90e-07 | 25 |