FFCP PHASE1:Hg19::chr5:102143894..102143910,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5066 | |EntrezGene=5066 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8596 | |HGNC=8596 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=127bp_to_ENST00000509523_5end | |association_with_transcript=127bp_to_ENST00000509523_5end | ||
|cluster_id=chr5:102143894..102143910,+ | |||
|coexpression_cluster_id=C97 | |||
|description=CAGE_peak_6_at_PAM_5end | |description=CAGE_peak_6_at_PAM_5end | ||
|id=chr5:102143894..102143910,+ | |id=chr5:102143894..102143910,+ | ||
|ontology_enrichment_celltype=CL:0000047!5.29e-09!8;CL:0002319!5.34e-08!25;CL:0000540!9.24e-07!6;CL:0000031!9.24e-07!6;CL:0000404!9.24e-07!6 | |ontology_enrichment_celltype=CL:0000047!5.29e-09!8;CL:0002319!5.34e-08!25;CL:0000540!9.24e-07!6;CL:0000031!9.24e-07!6;CL:0000404!9.24e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002588;7.24e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002588,7.69e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.75e-09;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p6@PAM | |short_description=p6@PAM | ||
}} | }} |
Latest revision as of 12:54, 19 September 2015
Short description: | p6@PAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PAM_5end |
Coexpression cluster: | C97_small_smallcell_gastrointestinal_argyrophil_putamen_duodenum_brain |
Association with transcript: | 127bp_to_ENST00000509523_5end |
EntrezGene: | PAM |
HGNC: | 8596 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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smooth muscle cell of the umbilical vein | 7.69e-07 | 2 |