FFCP PHASE1:Hg19::chr15:86212972..86212989,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11214 | |EntrezGene=11214 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=371 | |HGNC=371 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_BC063592_5end | |association_with_transcript=0bp_to_BC063592_5end | ||
|cluster_id=chr15:86212972..86212989,+ | |||
|coexpression_cluster_id=C273 | |||
|description=CAGE_peak_20_at_AKAP13_5end | |description=CAGE_peak_20_at_AKAP13_5end | ||
|id=chr15:86212972..86212989,+ | |id=chr15:86212972..86212989,+ | ||
|ontology_enrichment_celltype=CL:0002057!2.35e-23!42;CL:0000860!1.07e-22!45;CL:0000738!1.04e-21!140;CL:0000766!5.03e-19!76;CL:0000557!1.96e-18!71;CL:0002009!3.65e-17!65;CL:0000839!1.48e-16!70;CL:0002031!4.24e-16!124;CL:0002194!5.82e-16!63;CL:0000576!5.82e-16!63;CL:0000040!5.82e-16!63;CL:0000559!5.82e-16!63;CL:0002087!1.29e-15!119;CL:0000037!4.08e-15!172;CL:0000566!4.08e-15!172;CL:0002032!7.14e-14!165;CL:0000837!7.14e-14!165;CL:0000763!5.35e-13!112;CL:0000049!5.35e-13!112;CL:0000988!7.37e-13!182 | |ontology_enrichment_celltype=CL:0002057!2.35e-23!42;CL:0000860!1.07e-22!45;CL:0000738!1.04e-21!140;CL:0000766!5.03e-19!76;CL:0000557!1.96e-18!71;CL:0002009!3.65e-17!65;CL:0000839!1.48e-16!70;CL:0002031!4.24e-16!124;CL:0002194!5.82e-16!63;CL:0000576!5.82e-16!63;CL:0000040!5.82e-16!63;CL:0000559!5.82e-16!63;CL:0002087!1.29e-15!119;CL:0000037!4.08e-15!172;CL:0000566!4.08e-15!172;CL:0002032!7.14e-14!165;CL:0000837!7.14e-14!165;CL:0000763!5.35e-13!112;CL:0000049!5.35e-13!112;CL:0000988!7.37e-13!182 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.05e-52;33!CL:0002057;5.05e-52;33!CL:0000473;4.96e-41;39!CL:0000234;4.96e-41;39!CL:0000576;1.65e-25;48!CL:0000766;2.72e-20;69!CL:0000763;5.11e-09;100!CL:0000738;7.67e-09;136!CL:0002087;1.94e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.35e-49,42;CL:0002057,5.35e-49,42;CL:0000473,1.17e-46,48;CL:0000234,1.17e-46,48;CL:0000557,1.95e-40,67;CL:0002009,1.96e-38,61;CL:0000766,6.59e-37,72;CL:0000839,2.34e-36,66;CL:0002194,4.55e-35,59;CL:0000576,4.55e-35,59;CL:0000040,4.55e-35,59;CL:0000559,4.55e-35,59;CL:0000738,3.07e-28,136;CL:0002031,3.80e-26,120;CL:0000763,4.77e-25,108;CL:0000049,4.77e-25,108;CL:0002087,2.11e-23,115;CL:0000037,4.72e-20,168;CL:0002032,2.05e-19,161;CL:0000837,2.05e-19,161;CL:0000988,2.67e-18,177;CL:0000134,4.10e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;7.36e-35;42!CL:0000049;1.28e-08;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.27e-14!80;UBERON:0002390!1.93e-13!102;UBERON:0003061!1.93e-13!102;UBERON:0001474!5.19e-13!86;UBERON:0002193!2.08e-11!112;UBERON:0004765!3.36e-10!101;UBERON:0001434!3.36e-10!101;UBERON:0002405!2.93e-09!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.11e-34,76;UBERON:0001474,7.39e-31,82;UBERON:0002390,6.97e-30,98;UBERON:0003061,6.97e-30,98;UBERON:0002193,1.97e-27,108;UBERON:0002405,2.06e-27,93;UBERON:0004765,4.62e-27,90;UBERON:0001434,3.50e-23,100;UBERON:0003081,1.24e-14,203;UBERON:0002204,3.26e-14,167;UBERON:0000926,5.32e-08,315;UBERON:0004120,5.32e-08,315;UBERON:0006603,5.32e-08,315 | |||
|phase1_expression=1.2717486548939,0.428201047781966,0.281908808191942,1.0007329835313,0.446961094427288,0,0,0,0,0,0,0,0.263766978228454,0.247532705920093,0,0.672325146451775,0,0,0,0.123121058076788,0,0,0,0.273748850145768,0,0.0764134057479513,0,0.157421562627358,0.786728553697808,0.383829398097213,0.77408061658038,0,0.30120591877825,0,0.619737604642413,0.710846162437108,0,0.553995408531877,0.802177789880567,0.434021741431704,0.671746422719773,0.32389366601898,0,3.19876125315042,2.26725566213286,3.15359279544161,3.0215774797739,2.87817521615278,2.47765096716083,5.46615545412086,4.86705342405291,2.60130452877444,2.41321976515633,5.16387746867061,2.70852973188684,4.32957380947991,3.0019676506363,1.57306439111559,3.97909060082173,2.88836124368484,4.47535988059329,3.62836430205388,5.78444607102732,4.68847225585964,7.2552309657146,5.10646702222026,1.24564449799115,6.02996796616184,10.429658368404,1.3031330682307,1.21079900526674,0.368277635987565,3.16462387440884,0.633765858935825,0.850417199860174,0.419317291016752,0.673971786878971,1.20141514273205,1.6072558669708,1.71007646244749,1.19350006319454,0,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0.954053754535364,3.41527781465669,0.587237189370939,1.14681968437569,0,0,0.263384084775077,0.393419540227666,1.17903228824749,2.2616164889946,0.167186495390678,0,0,0,0.111410456885174,0.883817722424512,0.221533894583621,1.08321545506006,0.768547918354051,0.390178042679635,0.328875809207352,0.276350017785848,0.289803085735052,0.296573126324121,0.802622484269139,1.04535523804977,0,0.383220493601921,0,0.506039384039006,0,0,0,0.301150238155546,0.127986611154418,0,0,0,1.00803371612366,1.60464117470104,0.434473211648397,2.43806866313962,0,0.12786256184353,0,0,0.144846518960824,0.795285947051099,0.486634870302636,0.283604451492204,0.443458794925128,0,0.327447688744282,0,0,0,0.174129737299267,0,0.476981248610684,0.571994910780128,0.74291500265913,0.198762407366705,0,0,0,0,0.275118041940067,0,0.258416759169329,0,0.33472061276467,0,0,0.488124115096339,0,0,0,0.44905874525234,0.225222960966644,0,0,0,0,0,0,0,0,0.397227542439656,0.286836620748814,0,0,0,0,0,0.269421344139376,0,0,0,0,0.312160076830321,0,0.298897361103602,0,0.161872944368132,0,0,0.245668634623536,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0.89694817844431,0.640672166455702,0.423863802319124,0.300091096084402,0.103052529238439,1.03056216018252,0.37223371266318,0,0,0.252433774244115,0.184099797284599,0.484938170456436,0.355009592516614,0.201504196455281,0.339121184620975,0,0.272746120590835,0,0.121973706129595,0,0.116193942869518,0,0,1.09493207722749,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.220587945464788,0,0.237270619111097,0,0,0,0,0,0.4115740113314,0,1.26755034821831,0.982827216677626,0,0.441463099414651,0.245976877086227,0.343135620597051,0,0,0,0.0925884451585296,0,0,0,0,0.117408694235822,0,0,0,0,0.858486162094873,0.246217006087397,0.234004265139238,0.297262324577456,0,0,0,0.0895585227028483,0.581267877027924,0.383382679165211,0.492663237895943,1.58487181223807,0.414656231081544,2.30591925467138,1.13618190083742,0.317489471460845,0,0,0,0,0,0,0,0,0.36669142910475,0.387815147273333,0,0,0.797814349754612,0,0,0,0,0.142977993658148,0,0,0,0,0,0.602878754119172,0,0.299918973546171,1.2162378064119,1.00451418286425,0,0.239624855491583,0,0,0,0.205476322550383,0.179060963239896,0.112085143993527,0.591092280605782,2.80315847317372,0.77005821767849,0,0,0,0,0,12.7331194071021,8.97484377612075,0.828831026872071,0.12269149171914,0,0,0.415941723061614,0.535286966391485,0.473107245101804,0.234282829985426,0,0,0,0,0.184369168541703,0.0868836144680828,0,0,1.44737618286021,1.2942852049117,0.320182673410333,0,0,0,0.496215615637554,0.153461973288062,0.280660094433074,0.384417447767103,0.511707249066704,0.321707842287215,0,0,0,0,0,0,0.362578348774867,0,1.10497186723076,0.114814448164607,0.182091168006717,0.262248829918848,0,0.0770153371044148,0,0,0.105551628892876,0,0,0.647747748306418,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0.183138929636687,0,0,0,0,0,0.154048617114644,0,0,0.107420244868274,0.145016693914229,0.170453254832202,0.356128142586949,0,0.192190067365106,0.127612712494584,0,0,0,0,0,0,0,0.18532421910392,0,0,0,0.190630193923825,0,0.855877976067841,0,0,0.179872457583315,0.274537029736055,0,0,0,0,0,0.487426979262569,1.05650146756755,0.136499911407986,0.282810863907425,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0.281695602532241,0.143411352204052,0.0982490410131212,0,0,0.422215270595328,0.329294892959902,0,0,0.0962221127255121,0,0,0.470719003883896,0,0,0,0.229723400206959,1.01489521846434,0,0.569647187174163,0.476463550915578,0,1.94541993357815,0.540031437238115,0,0.213648142254946,0,0,0.929015875628594,0.144269212976445,0.142283686696828,0.159426272728822,0.798317485731266,0,0.423347165447766,0,0,0.228234679033192,0,0,0.338583555603207,0.321176150207399,0.80719882876419,0.425846237690326,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0.18714054040822,1.02555725490326,0.121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| ||
|short_description=p20@AKAP13 | |short_description=p20@AKAP13 | ||
}} | }} |
Latest revision as of 14:24, 19 September 2015
Short description: | p20@AKAP13 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_AKAP13_5end |
Coexpression cluster: | C273_Neutrophils_CD14_Eosinophils_Monocytederived_CD4_Natural_Mast |
Association with transcript: | 0bp_to_BC063592_5end |
EntrezGene: | AKAP13 |
HGNC: | 371 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.35e-49 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.35e-49 | 42 |
defensive cell | 1.17e-46 | 48 |
phagocyte | 1.17e-46 | 48 |
granulocyte monocyte progenitor cell | 1.95e-40 | 67 |
macrophage dendritic cell progenitor | 1.96e-38 | 61 |
myeloid leukocyte | 6.59e-37 | 72 |
myeloid lineage restricted progenitor cell | 2.34e-36 | 66 |
monopoietic cell | 4.55e-35 | 59 |
monocyte | 4.55e-35 | 59 |
monoblast | 4.55e-35 | 59 |
promonocyte | 4.55e-35 | 59 |
leukocyte | 3.07e-28 | 136 |
hematopoietic lineage restricted progenitor cell | 3.80e-26 | 120 |
myeloid cell | 4.77e-25 | 108 |
common myeloid progenitor | 4.77e-25 | 108 |
nongranular leukocyte | 2.11e-23 | 115 |
hematopoietic stem cell | 4.72e-20 | 168 |
hematopoietic oligopotent progenitor cell | 2.05e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.05e-19 | 161 |
hematopoietic cell | 2.67e-18 | 177 |
mesenchymal cell | 4.10e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.11e-34 | 76 |
bone element | 7.39e-31 | 82 |
hematopoietic system | 6.97e-30 | 98 |
blood island | 6.97e-30 | 98 |
hemolymphoid system | 1.97e-27 | 108 |
immune system | 2.06e-27 | 93 |
skeletal element | 4.62e-27 | 90 |
skeletal system | 3.50e-23 | 100 |
lateral plate mesoderm | 1.24e-14 | 203 |
musculoskeletal system | 3.26e-14 | 167 |
mesoderm | 5.32e-08 | 315 |
mesoderm-derived structure | 5.32e-08 | 315 |
presumptive mesoderm | 5.32e-08 | 315 |