FFCP PHASE1:Hg19::chr18:43652211..43652267,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr18:43652211..43652267,-
|short_description=p1@PSTPIP2
|description=CAGE_peak_1_at_PSTPIP2_5end
|association_with_transcript=0bp_to_ENST00000360076,ENST000004...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9050 | |EntrezGene=9050 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9581 | |HGNC=9581 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H939 | |UniProt=Q9H939 | ||
|association_with_transcript=0bp_to_ENST00000360076,ENST00000409746,ENST00000469996,NM_024430,uc002lbp.3,uc002lbq.3_5end | |||
|cluster_id=chr18:43652211..43652267,- | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_1_at_PSTPIP2_5end | |||
|id=chr18:43652211..43652267,- | |||
|ontology_enrichment_celltype=CL:0000763!1.03e-45!112;CL:0000049!1.03e-45!112;CL:0000766!1.53e-31!76;CL:0000557!1.53e-28!71;CL:0000839!4.58e-28!70;CL:0002009!6.53e-26!65;CL:0002057!1.98e-25!42;CL:0002194!6.68e-25!63;CL:0000576!6.68e-25!63;CL:0000040!6.68e-25!63;CL:0000559!6.68e-25!63;CL:0000860!2.57e-21!45;CL:0000037!2.63e-21!172;CL:0000566!2.63e-21!172;CL:0002032!3.03e-21!165;CL:0000837!3.03e-21!165;CL:0000988!4.64e-18!182;CL:0000738!5.07e-11!140;CL:0002031!1.69e-09!124;CL:0002087!1.89e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000860;8.30e-19;33!CL:0002057;8.30e-19;33!CL:0000473;7.49e-18;39!CL:0000234;7.49e-18;39!CL:0000576;3.38e-17;48!CL:0000766;1.49e-15;69!CL:0000763;5.57e-15;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.56e-49,108;CL:0000049,3.56e-49,108;CL:0000766,4.58e-35,72;CL:0000557,5.50e-32,67;CL:0000839,1.67e-31,66;CL:0002009,2.43e-29,61;CL:0002194,2.60e-28,59;CL:0000576,2.60e-28,59;CL:0000040,2.60e-28,59;CL:0000559,2.60e-28,59;CL:0000473,7.55e-28,48;CL:0000234,7.55e-28,48;CL:0000860,1.83e-25,42;CL:0002057,1.83e-25,42;CL:0000037,3.42e-23,168;CL:0002032,3.44e-23,161;CL:0000837,3.44e-23,161;CL:0000988,3.98e-20,177;CL:0000738,2.09e-12,136;CL:0002031,7.33e-11,120;CL:0002087,1.25e-08,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.61e-18;42!CL:0000049;1.11e-13;108 | |||
|ontology_enrichment_disease=DOID:8692!3.38e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;6.78e-12;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.19e-12,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.36e-27!102;UBERON:0003061!1.36e-27!102;UBERON:0002193!7.76e-26!112;UBERON:0002371!3.70e-25!80;UBERON:0001474!1.35e-22!86;UBERON:0004765!8.28e-21!101;UBERON:0001434!8.28e-21!101;UBERON:0002405!1.96e-17!115;UBERON:0002204!5.98e-15!167;UBERON:0003081!1.97e-14!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.37e-30,98;UBERON:0003061,2.37e-30,98;UBERON:0002193,2.65e-28,108;UBERON:0002371,4.31e-28,76;UBERON:0001474,3.50e-25,82;UBERON:0004765,3.85e-24,90;UBERON:0002405,1.00e-23,93;UBERON:0001434,3.95e-22,100;UBERON:0002204,9.64e-16,167;UBERON:0003081,2.99e-15,203;UBERON:0000926,4.85e-07,315;UBERON:0004120,4.85e-07,315;UBERON:0006603,4.85e-07,315 | |||
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| ||
|short_description=p1@PSTPIP2 | |||
}} | }} |
Latest revision as of 14:53, 19 September 2015
Short description: | p1@PSTPIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PSTPIP2_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 0bp_to_ENST00000360076, ENST00000409746, ENST00000469996, NM_024430, uc002lbp.3, uc002lbq.3_5end |
EntrezGene: | PSTPIP2 |
HGNC: | 9581 |
UniProt: | Q9H939 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.56e-49 | 108 |
common myeloid progenitor | 3.56e-49 | 108 |
myeloid leukocyte | 4.58e-35 | 72 |
granulocyte monocyte progenitor cell | 5.50e-32 | 67 |
myeloid lineage restricted progenitor cell | 1.67e-31 | 66 |
macrophage dendritic cell progenitor | 2.43e-29 | 61 |
monopoietic cell | 2.60e-28 | 59 |
monocyte | 2.60e-28 | 59 |
monoblast | 2.60e-28 | 59 |
promonocyte | 2.60e-28 | 59 |
defensive cell | 7.55e-28 | 48 |
phagocyte | 7.55e-28 | 48 |
classical monocyte | 1.83e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.83e-25 | 42 |
hematopoietic stem cell | 3.42e-23 | 168 |
hematopoietic oligopotent progenitor cell | 3.44e-23 | 161 |
hematopoietic multipotent progenitor cell | 3.44e-23 | 161 |
hematopoietic cell | 3.98e-20 | 177 |
leukocyte | 2.09e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 7.33e-11 | 120 |
nongranular leukocyte | 1.25e-08 | 115 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.37e-30 | 98 |
blood island | 2.37e-30 | 98 |
hemolymphoid system | 2.65e-28 | 108 |
bone marrow | 4.31e-28 | 76 |
bone element | 3.50e-25 | 82 |
skeletal element | 3.85e-24 | 90 |
immune system | 1.00e-23 | 93 |
skeletal system | 3.95e-22 | 100 |
musculoskeletal system | 9.64e-16 | 167 |
lateral plate mesoderm | 2.99e-15 | 203 |
mesoderm | 4.85e-07 | 315 |
mesoderm-derived structure | 4.85e-07 | 315 |
presumptive mesoderm | 4.85e-07 | 315 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.19e-12 | 31 |