FFCP PHASE1:Hg19::chrX:135863084..135863115,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9459 | |EntrezGene=9459 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=685 | |HGNC=685 | ||
|TSSclassifier=strong | |||
|UniProt=F5H8B2,Q15052,Q8N4Q3 | |UniProt=F5H8B2,Q15052,Q8N4Q3 | ||
|association_with_transcript=387bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | |association_with_transcript=387bp_to_ENST00000535736,NM_004840,uc004fab.2_5end | ||
|cluster_id=chrX:135863084..135863115,- | |||
|coexpression_cluster_id=C1020 | |||
|description=CAGE_peak_2_at_ARHGEF6_5end | |description=CAGE_peak_2_at_ARHGEF6_5end | ||
|id=chrX:135863084..135863115,- | |id=chrX:135863084..135863115,- | ||
|ontology_enrichment_celltype=CL:0000037!6.73e-70!172;CL:0000566!6.73e-70!172;CL:0002032!1.18e-65!165;CL:0000837!1.18e-65!165;CL:0000988!2.16e-62!182;CL:0000738!3.07e-56!140;CL:0002031!8.19e-48!124;CL:0002087!1.68e-45!119;CL:0000763!3.20e-38!112;CL:0000049!3.20e-38!112;CL:0000766!1.70e-26!76;CL:0000542!8.46e-24!53;CL:0000051!8.46e-24!53;CL:0000838!1.84e-23!52;CL:0000557!3.54e-23!71;CL:0000839!8.25e-23!70;CL:0002009!1.01e-19!65;CL:0002194!2.66e-19!63;CL:0000576!2.66e-19!63;CL:0000040!2.66e-19!63;CL:0000559!2.66e-19!63;CL:0002057!2.10e-16!42;CL:0000134!2.15e-15!358;CL:0000084!3.22e-15!25;CL:0000827!3.22e-15!25;CL:0000860!1.94e-14!45;CL:0002320!5.43e-14!365;CL:0000791!4.20e-12!18;CL:0000789!4.20e-12!18;CL:0002420!4.20e-12!18;CL:0002419!4.20e-12!18;CL:0000790!4.20e-12!18;CL:0000048!1.25e-11!430;CL:0000219!7.73e-11!390;CL:0000723!1.64e-10!436;CL:0000034!2.28e-10!444;CL:0000945!1.79e-08!24;CL:0000826!1.79e-08!24;CL:0000236!2.30e-08!14;CL:0000625!3.96e-08!11 | |ontology_enrichment_celltype=CL:0000037!6.73e-70!172;CL:0000566!6.73e-70!172;CL:0002032!1.18e-65!165;CL:0000837!1.18e-65!165;CL:0000988!2.16e-62!182;CL:0000738!3.07e-56!140;CL:0002031!8.19e-48!124;CL:0002087!1.68e-45!119;CL:0000763!3.20e-38!112;CL:0000049!3.20e-38!112;CL:0000766!1.70e-26!76;CL:0000542!8.46e-24!53;CL:0000051!8.46e-24!53;CL:0000838!1.84e-23!52;CL:0000557!3.54e-23!71;CL:0000839!8.25e-23!70;CL:0002009!1.01e-19!65;CL:0002194!2.66e-19!63;CL:0000576!2.66e-19!63;CL:0000040!2.66e-19!63;CL:0000559!2.66e-19!63;CL:0002057!2.10e-16!42;CL:0000134!2.15e-15!358;CL:0000084!3.22e-15!25;CL:0000827!3.22e-15!25;CL:0000860!1.94e-14!45;CL:0002320!5.43e-14!365;CL:0000791!4.20e-12!18;CL:0000789!4.20e-12!18;CL:0002420!4.20e-12!18;CL:0002419!4.20e-12!18;CL:0000790!4.20e-12!18;CL:0000048!1.25e-11!430;CL:0000219!7.73e-11!390;CL:0000723!1.64e-10!436;CL:0000034!2.28e-10!444;CL:0000945!1.79e-08!24;CL:0000826!1.79e-08!24;CL:0000236!2.30e-08!14;CL:0000625!3.96e-08!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;2.35e-17;25!CL:0000542;2.76e-15;53!CL:0002087;4.74e-15;104!CL:0000738;1.85e-14;136!CL:0000576;3.38e-14;48!CL:0000766;5.83e-14;69!CL:0000791;9.67e-14;18!CL:0000789;9.67e-14;18!CL:0002419;9.67e-14;18!CL:0000763;1.18e-13;100!CL:0000988;5.88e-13;177!CL:0000473;1.55e-12;39!CL:0000234;1.55e-12;39!CL:0000860;1.89e-12;33!CL:0002057;1.89e-12;33!CL:0000236;3.45e-09;13!CL:0000625;3.74e-09;11!CL:0000945;1.21e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,9.04e-82,168;CL:0002032,7.58e-77,161;CL:0000837,7.58e-77,161;CL:0000988,4.41e-74,177;CL:0000738,8.75e-67,136;CL:0002031,5.57e-57,120;CL:0002087,2.69e-54,115;CL:0000763,4.27e-46,108;CL:0000049,4.27e-46,108;CL:0000766,2.67e-33,72;CL:0000557,2.59e-29,67;CL:0000839,6.97e-29,66;CL:0000542,3.83e-26,53;CL:0000051,3.83e-26,53;CL:0000838,9.43e-26,52;CL:0002009,3.69e-25,61;CL:0002194,1.08e-24,59;CL:0000576,1.08e-24,59;CL:0000040,1.08e-24,59;CL:0000559,1.08e-24,59;CL:0000473,5.57e-21,48;CL:0000234,5.57e-21,48;CL:0000860,9.75e-19,42;CL:0002057,9.75e-19,42;CL:0000084,2.30e-17,25;CL:0000827,2.30e-17,25;CL:0000134,3.66e-16,354;CL:0002320,8.23e-15,361;CL:0000791,9.28e-14,18;CL:0000789,9.28e-14,18;CL:0002420,9.28e-14,18;CL:0002419,9.28e-14,18;CL:0000790,9.28e-14,18;CL:0000219,4.65e-11,386;CL:0000236,1.95e-09,14;CL:0000625,3.66e-09,11;CL:0000945,1.26e-08,24;CL:0000826,1.26e-08,24;CL:0000048,1.97e-08,427;CL:0000034,8.97e-08,441;CL:0000723,1.08e-07,433 | |||
|ontology_enrichment_development_v019=CL:0000051;2.76e-15;53!CL:0000790;9.67e-14;18!CL:0002057;1.40e-13;42!CL:0000049;5.59e-13;108 | |||
|ontology_enrichment_disease=DOID:1240!1.11e-15!39;DOID:2531!7.14e-15!51;DOID:0060083!7.14e-15!51;DOID:8692!8.55e-12!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;5.26e-13;39!DOID:8692;3.47e-12;31!DOID:2531;8.16e-10;51!DOID:0060083;8.16e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.15e-17,39;DOID:2531,9.38e-16,51;DOID:0060083,9.38e-16,51;DOID:8692,9.21e-13,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.67e-27!102;UBERON:0003061!8.67e-27!102;UBERON:0002193!3.11e-25!112;UBERON:0002371!1.27e-19!80;UBERON:0001474!1.78e-17!86;UBERON:0007023!1.50e-15!115;UBERON:0002405!1.96e-14!115;UBERON:0002384!2.02e-14!375;UBERON:0004765!4.37e-12!101;UBERON:0001434!4.37e-12!101;UBERON:0002204!3.05e-07!167 | |||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@ARHGEF6 | |short_description=p2@ARHGEF6 | ||
}} | }} |
Latest revision as of 15:22, 19 September 2015
Short description: | p2@ARHGEF6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ARHGEF6_5end |
Coexpression cluster: | C1020_Mast_CD4_acute_chronic_CD8_thymus_Peripheral |
Association with transcript: | 387bp_to_ENST00000535736, NM_004840, uc004fab.2_5end |
EntrezGene: | ARHGEF6 |
HGNC: | 685 |
UniProt: | F5H8B2Q15052Q8N4Q3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 6.25e-34 | 98 |
blood island | 6.25e-34 | 98 |
hemolymphoid system | 2.44e-30 | 108 |
bone marrow | 6.69e-25 | 76 |
immune system | 1.18e-24 | 93 |
bone element | 1.27e-22 | 82 |
skeletal element | 2.52e-18 | 90 |
connective tissue | 5.87e-15 | 371 |
skeletal system | 1.28e-14 | 100 |
adult organism | 1.60e-12 | 114 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.15e-17 | 39 |
hematologic cancer | 9.38e-16 | 51 |
immune system cancer | 9.38e-16 | 51 |
myeloid leukemia | 9.21e-13 | 31 |