FFCP PHASE1:Hg19::chr22:29702996..29703061,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10634 | |EntrezGene=10634 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16955 | |HGNC=16955 | ||
|TSSclassifier=strong | |||
|UniProt=Q99501,E7EQM6,B5MCR7,A0A5E8 | |UniProt=Q99501,E7EQM6,B5MCR7,A0A5E8 | ||
|association_with_transcript=0bp_to_ENST00000333679,ENST00000341313,ENST00000360113,ENST00000403764,ENST00000406549,ENST00000407854,ENST00000471961,ENST00000487341,NM_006478,NM_152236,NM_152237,uc003afa.1,uc003afb.1,uc003afc.1,uc003afd.1,uc003afe.1,uc010gvm.1_5end | |association_with_transcript=0bp_to_ENST00000333679,ENST00000341313,ENST00000360113,ENST00000403764,ENST00000406549,ENST00000407854,ENST00000471961,ENST00000487341,NM_006478,NM_152236,NM_152237,uc003afa.1,uc003afb.1,uc003afc.1,uc003afd.1,uc003afe.1,uc010gvm.1_5end | ||
|cluster_id=chr22:29702996..29703061,+ | |||
|description=CAGE_peak_1_at_GAS2L1_5end | |description=CAGE_peak_1_at_GAS2L1_5end | ||
|id=chr22:29702996..29703061,+ | |id=chr22:29702996..29703061,+ | ||
|ontology_enrichment_celltype=CL:0000220!2.33e-10!246;CL:0000222!2.69e-10!119;CL:0002321!8.02e-10!248;CL:0000213!8.75e-08!57;CL:0000215!8.75e-08!57;CL:0000115!1.11e-07!35;CL:0000055!1.98e-07!180;CL:0000071!2.33e-07!18;CL:0002546!2.33e-07!18;CL:0002078!8.91e-07!44 | |ontology_enrichment_celltype=CL:0000220!2.33e-10!246;CL:0000222!2.69e-10!119;CL:0002321!8.02e-10!248;CL:0000213!8.75e-08!57;CL:0000215!8.75e-08!57;CL:0000115!1.11e-07!35;CL:0000055!1.98e-07!180;CL:0000071!2.33e-07!18;CL:0002546!2.33e-07!18;CL:0002078!8.91e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000071;2.43e-07;18!CL:0000115;9.32e-07;36 | |ontology_enrichment_celltype_v019=CL:0000071;2.43e-07;18!CL:0000115;9.32e-07;36 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.86e-10,121;CL:0002321,8.03e-10,250;CL:0000213,4.75e-08,58;CL:0000215,4.75e-08,58;CL:0000115,5.69e-08,36;CL:0000071,2.29e-07,18;CL:0002546,2.29e-07,18;CL:0002078,4.81e-07,45 | |||
|ontology_enrichment_development_v019=CL:0002546;2.43e-07;18 | |ontology_enrichment_development_v019=CL:0002546;2.43e-07;18 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.98e-22!659;UBERON:0000467!1.61e-21!625;UBERON:0000480!3.63e-21!626;UBERON:0004111!1.10e-20!241;UBERON:0000477!3.00e-19!286;UBERON:0000475!3.32e-19!365;UBERON:0000025!7.07e-18!194;UBERON:0000923!1.61e-17!604;UBERON:0005291!1.61e-17!604;UBERON:0006598!1.61e-17!604;UBERON:0002532!1.61e-17!604;UBERON:0002050!1.80e-17!605;UBERON:0005423!1.80e-17!605;UBERON:0000483!2.86e-17!309;UBERON:0000119!3.83e-17!312;UBERON:0000922!5.06e-16!612;UBERON:0001049!1.09e-15!57;UBERON:0005068!1.09e-15!57;UBERON:0006241!1.09e-15!57;UBERON:0007135!1.09e-15!57;UBERON:0000033!1.21e-15!123;UBERON:0002616!1.14e-14!59;UBERON:0004121!4.19e-14!169;UBERON:0000924!1.85e-13!173;UBERON:0006601!1.85e-13!173;UBERON:0007023!1.95e-13!115;UBERON:0000153!2.64e-13!129;UBERON:0007811!2.64e-13!129;UBERON:0003075!3.24e-13!86;UBERON:0007284!3.24e-13!86;UBERON:0000955!3.25e-13!69;UBERON:0006238!3.25e-13!69;UBERON:0002346!3.17e-12!90;UBERON:0001981!5.92e-12!60;UBERON:0007500!5.92e-12!60;UBERON:0004537!5.92e-12!60;UBERON:0006965!5.92e-12!60;UBERON:0001017!8.93e-12!82;UBERON:0000055!2.18e-11!69;UBERON:0002049!2.29e-11!79;UBERON:0007798!2.29e-11!79;UBERON:0000481!5.04e-11!347;UBERON:0005743!1.14e-10!86;UBERON:0003080!2.10e-10!42;UBERON:0002020!2.73e-10!34;UBERON:0003528!2.73e-10!34;UBERON:0001893!3.28e-10!34;UBERON:0002780!3.97e-10!41;UBERON:0001890!3.97e-10!41;UBERON:0006240!3.97e-10!41;UBERON:0004872!4.47e-10!84;UBERON:0001637!6.45e-10!42;UBERON:0003509!6.45e-10!42;UBERON:0004572!6.45e-10!42;UBERON:0002791!1.12e-09!33;UBERON:0001869!1.27e-09!32;UBERON:0000062!2.92e-09!511;UBERON:0000064!7.57e-09!219;UBERON:0001009!9.75e-09!113;UBERON:0004535!1.15e-08!110;UBERON:0000073!5.72e-08!94;UBERON:0001016!5.72e-08!94;UBERON:0003914!5.76e-08!118;UBERON:0003056!7.31e-08!61;UBERON:0004573!1.34e-07!33;UBERON:0004571!1.34e-07!33;UBERON:0001986!2.33e-07!18;UBERON:0004638!2.33e-07!18;UBERON:0004852!2.33e-07!18;UBERON:0000956!2.42e-07!25;UBERON:0000203!2.42e-07!25;UBERON:0002619!3.75e-07!22;UBERON:0000487!5.04e-07!22;UBERON:0003076!7.94e-07!15;UBERON:0003057!7.94e-07!15 | |ontology_enrichment_uberon=UBERON:0000468!3.98e-22!659;UBERON:0000467!1.61e-21!625;UBERON:0000480!3.63e-21!626;UBERON:0004111!1.10e-20!241;UBERON:0000477!3.00e-19!286;UBERON:0000475!3.32e-19!365;UBERON:0000025!7.07e-18!194;UBERON:0000923!1.61e-17!604;UBERON:0005291!1.61e-17!604;UBERON:0006598!1.61e-17!604;UBERON:0002532!1.61e-17!604;UBERON:0002050!1.80e-17!605;UBERON:0005423!1.80e-17!605;UBERON:0000483!2.86e-17!309;UBERON:0000119!3.83e-17!312;UBERON:0000922!5.06e-16!612;UBERON:0001049!1.09e-15!57;UBERON:0005068!1.09e-15!57;UBERON:0006241!1.09e-15!57;UBERON:0007135!1.09e-15!57;UBERON:0000033!1.21e-15!123;UBERON:0002616!1.14e-14!59;UBERON:0004121!4.19e-14!169;UBERON:0000924!1.85e-13!173;UBERON:0006601!1.85e-13!173;UBERON:0007023!1.95e-13!115;UBERON:0000153!2.64e-13!129;UBERON:0007811!2.64e-13!129;UBERON:0003075!3.24e-13!86;UBERON:0007284!3.24e-13!86;UBERON:0000955!3.25e-13!69;UBERON:0006238!3.25e-13!69;UBERON:0002346!3.17e-12!90;UBERON:0001981!5.92e-12!60;UBERON:0007500!5.92e-12!60;UBERON:0004537!5.92e-12!60;UBERON:0006965!5.92e-12!60;UBERON:0001017!8.93e-12!82;UBERON:0000055!2.18e-11!69;UBERON:0002049!2.29e-11!79;UBERON:0007798!2.29e-11!79;UBERON:0000481!5.04e-11!347;UBERON:0005743!1.14e-10!86;UBERON:0003080!2.10e-10!42;UBERON:0002020!2.73e-10!34;UBERON:0003528!2.73e-10!34;UBERON:0001893!3.28e-10!34;UBERON:0002780!3.97e-10!41;UBERON:0001890!3.97e-10!41;UBERON:0006240!3.97e-10!41;UBERON:0004872!4.47e-10!84;UBERON:0001637!6.45e-10!42;UBERON:0003509!6.45e-10!42;UBERON:0004572!6.45e-10!42;UBERON:0002791!1.12e-09!33;UBERON:0001869!1.27e-09!32;UBERON:0000062!2.92e-09!511;UBERON:0000064!7.57e-09!219;UBERON:0001009!9.75e-09!113;UBERON:0004535!1.15e-08!110;UBERON:0000073!5.72e-08!94;UBERON:0001016!5.72e-08!94;UBERON:0003914!5.76e-08!118;UBERON:0003056!7.31e-08!61;UBERON:0004573!1.34e-07!33;UBERON:0004571!1.34e-07!33;UBERON:0001986!2.33e-07!18;UBERON:0004638!2.33e-07!18;UBERON:0004852!2.33e-07!18;UBERON:0000956!2.42e-07!25;UBERON:0000203!2.42e-07!25;UBERON:0002619!3.75e-07!22;UBERON:0000487!5.04e-07!22;UBERON:0003076!7.94e-07!15;UBERON:0003057!7.94e-07!15 | ||
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| ||
|short_description=p1@GAS2L1 | |short_description=p1@GAS2L1 | ||
}} | }} |
Latest revision as of 15:25, 19 September 2015
Short description: | p1@GAS2L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GAS2L1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000333679, ENST00000341313, ENST00000360113, ENST00000403764, ENST00000406549, ENST00000407854, ENST00000471961, ENST00000487341, NM_006478, NM_152236, NM_152237, uc003afa.1, uc003afb.1, uc003afc.1, uc003afd.1, uc003afe.1, uc010gvm.1_5end |
EntrezGene: | GAS2L1 |
HGNC: | 16955 |
UniProt: | Q99501E7EQM6B5MCR7A0A5E8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.86e-10 | 121 |
embryonic cell | 8.03e-10 | 250 |
lining cell | 4.75e-08 | 58 |
barrier cell | 4.75e-08 | 58 |
endothelial cell | 5.69e-08 | 36 |
blood vessel endothelial cell | 2.29e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.29e-07 | 18 |
meso-epithelial cell | 4.81e-07 | 45 |