FFCP PHASE1:Hg19::chr14:29236269..29236285,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr14:29236269..29236285,+ to FFCP PHASE1:Hg19::chr14:29236269..29236285,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2290 | |EntrezGene=2290 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3811 | |HGNC=3811 | ||
|TSSclassifier=strong | |||
|UniProt=P55316 | |UniProt=P55316 | ||
|association_with_transcript=-1bp_to_ENST00000313071,NM_005249,uc001wqe.2_5end | |||
|cluster_id=chr14:29236269..29236285,+ | |||
|coexpression_cluster_id=C214 | |||
|description=CAGE_peak_3_at_FOXG1_5end | |||
|id=chr14:29236269..29236285,+ | |||
|ontology_enrichment_celltype=CL:0002319!7.71e-14!25;CL:0000243!1.05e-10!15;CL:0000125!1.05e-10!15;CL:0000030!1.05e-10!15;CL:0000339!1.05e-10!15;CL:0000095!2.43e-10!17;CL:0000123!2.43e-10!17;CL:0000133!8.57e-09!59;CL:0000128!1.42e-07!7;CL:0000126!1.42e-07!7;CL:0000127!1.42e-07!7;CL:0002453!1.42e-07!7 | |||
|ontology_enrichment_celltype_v019=CL:0002319;8.25e-15;25!CL:0000243;9.54e-12;15!CL:0000125;9.54e-12;15!CL:0000095;3.52e-10;17!CL:0000128;8.20e-09;7!CL:0000126;8.20e-09;7!CL:0000127;8.20e-09;7!CL:0000306;9.78e-07;4!CL:0002222;9.78e-07;4!CL:0002224;9.78e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.39e-15,25;CL:0000243,9.72e-12,15;CL:0000125,9.72e-12,15;CL:0000030,9.72e-12,15;CL:0000339,9.72e-12,15;CL:0000133,2.29e-10,59;CL:0000095,3.58e-10,17;CL:0000123,3.58e-10,17;CL:0000128,8.16e-09,7;CL:0000126,8.16e-09,7;CL:0000127,8.16e-09,7;CL:0002453,8.16e-09,7;CL:0000221,3.92e-08,72;CL:0000306,8.05e-07,4;CL:0002222,8.05e-07,4;CL:0002224,8.05e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000339;9.54e-12;15!UBERON:0006238;5.36e-09;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.09e-39!82;UBERON:0005743!2.62e-37!86;UBERON:0000073!2.53e-35!94;UBERON:0001016!2.53e-35!94;UBERON:0000955!6.02e-35!69;UBERON:0006238!6.02e-35!69;UBERON:0002780!2.21e-33!41;UBERON:0001890!2.21e-33!41;UBERON:0006240!2.21e-33!41;UBERON:0001893!1.47e-32!34;UBERON:0003080!3.30e-32!42;UBERON:0002791!1.46e-31!33;UBERON:0001869!1.71e-31!32;UBERON:0003056!4.13e-31!61;UBERON:0002020!1.54e-29!34;UBERON:0003528!1.54e-29!34;UBERON:0000153!1.50e-28!129;UBERON:0007811!1.50e-28!129;UBERON:0001049!4.30e-28!57;UBERON:0005068!4.30e-28!57;UBERON:0006241!4.30e-28!57;UBERON:0007135!4.30e-28!57;UBERON:0002616!5.41e-28!59;UBERON:0003075!9.70e-28!86;UBERON:0007284!9.70e-28!86;UBERON:0002346!2.73e-27!90;UBERON:0000033!3.58e-27!123;UBERON:0000956!4.71e-25!25;UBERON:0000203!4.71e-25!25;UBERON:0000924!1.90e-22!173;UBERON:0006601!1.90e-22!173;UBERON:0004121!2.04e-22!169;UBERON:0002619!5.86e-22!22;UBERON:0001950!4.47e-20!20;UBERON:0000025!6.89e-14!194;UBERON:0000475!3.72e-13!365;UBERON:0000483!1.46e-12!309;UBERON:0000119!3.96e-12!312;UBERON:0007023!6.13e-11!115;UBERON:0000477!5.64e-10!286;UBERON:0004111!3.12e-09!241;UBERON:0002420!4.37e-09!9;UBERON:0007245!4.37e-09!9;UBERON:0010009!4.37e-09!9;UBERON:0010011!4.37e-09!9;UBERON:0000454!4.37e-09!9;UBERON:0000064!7.20e-09!219;UBERON:0000481!5.47e-08!347;UBERON:0000200!1.78e-07!6;UBERON:0001871!2.37e-07!7;UBERON:0009663!4.41e-07!7;UBERON:0000467!9.22e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.05e-44;32!UBERON:0001893;2.60e-43;34!UBERON:0002791;4.88e-42;32!UBERON:0000956;2.62e-39;25!UBERON:0000203;2.62e-39;25!UBERON:0003528;3.21e-38;34!UBERON:0002020;3.21e-38;34!UBERON:0002619;2.29e-34;22!UBERON:0002780;3.93e-34;41!UBERON:0001890;3.93e-34;41!UBERON:0001950;2.28e-31;20!UBERON:0000073;7.17e-22;53!UBERON:0002616;7.17e-22;53!UBERON:0000955;5.13e-20;68!UBERON:0001017;7.97e-20;75!UBERON:0001016;5.47e-16;83!UBERON:0002420;1.57e-11;9!UBERON:0007245;1.57e-11;9!UBERON:0010009;1.57e-11;9!UBERON:0010011;1.57e-11;9!UBERON:0000454;1.57e-11;9!UBERON:0000200;5.75e-11;6!UBERON:0001872;1.46e-09;5!UBERON:0001871;1.48e-09;6!UBERON:0000349;2.04e-09;5!UBERON:0002021;2.91e-09;5!UBERON:0009663;1.95e-08;7!UBERON:0007625;2.64e-08;11!UBERON:0000369;9.25e-08;4!UBERON:0002435;9.25e-08;4!UBERON:0000204;9.25e-08;4!UBERON:0000488;6.13e-07;4!UBERON:0010077;9.78e-07;4!UBERON:0005389;9.78e-07;4!UBERON:0000484;9.78e-07;4!UBERON:0000965;9.78e-07;4!UBERON:0001803;9.78e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,1.24e-49,32;UBERON:0001893,3.01e-49,34;UBERON:0002780,9.27e-47,41;UBERON:0001890,9.27e-47,41;UBERON:0003080,9.27e-47,41;UBERON:0006240,9.27e-47,41;UBERON:0002791,3.05e-46,32;UBERON:0003056,1.24e-45,61;UBERON:0001017,7.30e-45,81;UBERON:0001016,8.86e-44,89;UBERON:0003528,5.88e-43,34;UBERON:0002020,5.88e-43,34;UBERON:0000955,1.80e-41,68;UBERON:0006238,1.80e-41,68;UBERON:0000956,2.42e-39,25;UBERON:0000203,2.42e-39,25;UBERON:0000073,8.04e-38,53;UBERON:0002616,8.04e-38,53;UBERON:0003075,2.86e-35,82;UBERON:0007284,2.86e-35,82;UBERON:0001049,3.87e-35,56;UBERON:0005068,3.87e-35,56;UBERON:0006241,3.87e-35,56;UBERON:0007135,3.87e-35,56;UBERON:0002619,2.13e-34,22;UBERON:0002346,6.40e-33,86;UBERON:0001950,2.15e-31,20;UBERON:0004121,2.98e-25,171;UBERON:0000924,2.98e-25,171;UBERON:0006601,2.98e-25,171;UBERON:0010371,1.27e-24,104;UBERON:0010314,2.81e-22,132;UBERON:0011216,4.63e-18,223;UBERON:0000025,1.55e-12,192;UBERON:0002420,1.39e-11,9;UBERON:0007245,1.39e-11,9;UBERON:0010009,1.39e-11,9;UBERON:0010011,1.39e-11,9;UBERON:0000454,1.39e-11,9;UBERON:0000200,5.81e-11,6;UBERON:0007023,8.55e-11,114;UBERON:0000483,2.63e-10,306;UBERON:0000119,4.99e-10,309;UBERON:0001872,1.43e-09,5;UBERON:0001871,1.47e-09,6;UBERON:0000349,2.02e-09,5;UBERON:0002021,2.84e-09,5;UBERON:0009663,1.74e-08,7;UBERON:0007625,2.33e-08,11;UBERON:0004111,4.08e-08,240;UBERON:0000369,9.35e-08,4;UBERON:0002435,9.35e-08,4;UBERON:0000204,9.35e-08,4;UBERON:0010082,9.35e-08,4;UBERON:0000488,6.24e-07,4;UBERON:0000923,7.96e-07,560;UBERON:0010316,7.96e-07,560;UBERON:0005291,7.96e-07,560;UBERON:0006598,7.96e-07,560;UBERON:0010317,7.96e-07,560;UBERON:0002532,7.96e-07,560;UBERON:0010077,8.05e-07,4;UBERON:0005389,8.05e-07,4;UBERON:0000484,8.05e-07,4;UBERON:0002546,8.05e-07,4;UBERON:0000965,8.05e-07,4;UBERON:0001803,8.05e-07,4;UBERON:0003073,8.05e-07,4;UBERON:0005426,8.05e-07,4 | |||
|phase1_expression=0.363356758541113,0,0,0,0,0,0,0,0.261185628199839,0.491467873003018,0.697801167972428,0,0,0,0,16.8081286612944,18.0808358407193,22.6396128020086,13.6621183661342,4.18611597461079,11.6280394009224,0.626909442956176,38.6418582626927,51.3279094023316,16.8227137057036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.5878995223756,13.747222642679,7.81729592668822,4.84622579341537,0,0,0,0,0,0,0,0,0.39752481473341,0,0,0,0,0,1.25396979922086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14734648299525,0.354668382198357,0,0,0,0.311211035399766,0.269421344139376,0.817309515567294,0.908144565869588,0.576175924479999,0.234321431833797,0,0,0,0.23486899728753,0,0.140450806702248,0,0.122834317311768,0.103325781175765,0,0,1.82032272387605,3.59309070908119,0,0.125118519871964,0,0,0,0.150238058906597,0.907457465280168,0.358779271377724,0.427114777637135,0,0.300091096084402,0.103052529238439,0,0,0,0,0,0,0,0,0.403008392910561,0.67824236924195,0,0.272746120590835,0,0,0,0.348581828608555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.8290128564135,0,0,0,0,0,0,0,4.11762744716461,0,0,0,2.68506490959736,0.325808305310325,0,21.649701303791,22.7223593751151,1.99594780200897,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.797814349754612,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410952645100767,0,0,0,0,0,103.16241743432,123.632861164741,113.673455478321,132.672882144804,59.9662426553973,0,0,0,0,0,0,0,0,0,0,0,0,2.0694614258501,0,0,0.173767228936166,0.587403472388222,1.02943027143257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.8086860257121,0,0,0,0,0,0.364182336013434,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0.831076008928724,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.145016693914229,0,0,0,0,0,0,0.464845549297286,0,0.6970372701606,4.62050370264133,0,0,0.37064843820784,0.143124886741991,0,0,0,0.767693373934002,0,0,0,0.179872457583315,0,0,0.808729926293264,1.58510321173008,0,7.31450608634386,0.243713489631284,0,0,0,6.78048699721457,0,0.66343897524122,0.438450885253763,4.6302042741335,5.24715801637306,0,0.30982349809975,0.563391205064483,0.143411352204052,0.196498082026242,0,0.354761064070598,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.213648142254946,0,2.69544237579135,0,0,0,0,0,0,0,0,0,0,0.156679895773023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.8478388419237,27.2898667836395,0.111308705022906,0,0.844501632511974,0,0,0,11.6586298052456,15.6317702935558,0,0,0,0,0,0,0,13.5706584453331,25.5112269945091,41.9188975802508,0,0,0,0,0,0,0,0,1.21537496453305,15.0576035588353,18.8130444255636,0,0,0,16.01513399224,0,0,0,0,0.23056390438806,1.43612231055635,3.36806852958225,0,0.0915975934018623,0,0,0,0,3.83512623049207,1.17637520590644,2.18168063068596,1.3282761290693,0,0.421996129056054,0,0,3.89499551535764,0,0,0,0,0.123563938946503,0,9.23395521835275,2.40773294189637,6.32514003458416,0,0,0,0,0,137.732742733721,0.442306057399416,5.56196651833622,5.39178595265685,0,0,0,0,7.9690672888342,1.52542140314453,0,0,0,0,0,0,0,0,0.872901148395775,0,0.451961481561065,0,11.1280182553674,27.666817832719,0,0,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.313808538937,7.0378770169062,2.02265412931063,1.80126086612937,7.25598508127563,0,0.429765441419957,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,8.74752658790234,26.4234607856457,0,0.137539436597234,0,0,0,31.3467712355407,0,0,0,1.05600336519407,0,0,0,0,0,1.08599920350743,0,0,2.39460383124975,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0.496166021811951,0,0,1.91502377331055,0,0,0,0,1.41348686625211,17.7213635993397,19.2801498545102,25.538949864126,0,0.110929051536852,0,45.7933981638924,5.99905958218112,0,0,0,0,0.724605143054126,0,0,0,0,0.251567901752575,0,4.11912123114462,1.81477108515887,3.10874401165561,6.20991629956462,1.59296767163702,0,1.08684069813382,0,0,0,0,0,0,0.363697318405119,0,0.928067519756987,0,0,0,0,0,0,0,0.782982875895635,0,1.15761237161917,0.489473409012935,0,0,0,0,0,0,0,0,5.46947921119288,22.8126419650356,0,0.132864840313363,0,6.87980682577466,0,0,0,0,0,0,0,0.279759015438889,1.24415452006595,0,0,0,0,0,0,0.123935764259002,0,0,0,7.20513673456923,0,0,26.0770653891626,5.6678630530234,27.2973898987729,12.3069818544453,44.6166902312441,30.4983483367201,14.2098568156029,1.42769420259154,0,0,0,0,0,0,0,0.0752103283492573,0.20170506870352,0,1.30953347240711,0,0,22.422478093307,10.9350933805939,29.9695854926717,24.5419185450419,39.92916105833,0,0,0.175871244359621,0,0,0,0.606965604236632,1.59363533945908,0,0.345701962667338,0,0.40781839786099,28.4138381791508,0,0,0,23.5673384874003,0,0.913158720509496,0,0,0.357382720883282,0,0,2.43401581223611,0,0,0,0,0,2.60330401607244,3.66417640464378,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,19.5694119806864,6.94429080406698,0,0,1.41095188908457,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,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| ||
|short_description=p3@FOXG1 | |||
}} | }} |
Latest revision as of 16:26, 19 September 2015
Short description: | p3@FOXG1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXG1_5end |
Coexpression cluster: | C214_Neurons_Neural_duodenum_temporal_occipital_parietal_brain |
Association with transcript: | -1bp_to_ENST00000313071, NM_005249, uc001wqe.2_5end |
EntrezGene: | FOXG1 |
HGNC: | 3811 |
UniProt: | P55316 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.39e-15 | 25 |
glial cell (sensu Vertebrata) | 9.72e-12 | 15 |
glial cell | 9.72e-12 | 15 |
glioblast | 9.72e-12 | 15 |
glioblast (sensu Vertebrata) | 9.72e-12 | 15 |
neurectodermal cell | 2.29e-10 | 59 |
neuron associated cell | 3.58e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 3.58e-10 | 17 |
oligodendrocyte | 8.16e-09 | 7 |
macroglial cell | 8.16e-09 | 7 |
astrocyte | 8.16e-09 | 7 |
oligodendrocyte precursor cell | 8.16e-09 | 7 |
ectodermal cell | 3.92e-08 | 72 |
crystallin accumulating cell | 8.05e-07 | 4 |
vertebrate lens cell | 8.05e-07 | 4 |
lens epithelial cell | 8.05e-07 | 4 |