FFCP PHASE1:Hg19::chr10:86088337..86088377,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:86088337..86088377,+
|short_description=p2@FAM190B
|description=CAGE_peak_2_at_FAM190B_5end
|association_with_transcript=0bp_to_ENST00000359979_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=54462 | |EntrezGene=54462 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29197 | |HGNC=29197 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H7U1 | |UniProt=Q9H7U1 | ||
|association_with_transcript=0bp_to_ENST00000359979_5end | |||
|cluster_id=chr10:86088337..86088377,+ | |||
|description=CAGE_peak_2_at_FAM190B_5end | |||
|id=chr10:86088337..86088377,+ | |||
|ontology_enrichment_celltype=CL:0000791!9.23e-10!18;CL:0000789!9.23e-10!18;CL:0002420!9.23e-10!18;CL:0002419!9.23e-10!18;CL:0000790!9.23e-10!18;CL:0000084!1.42e-07!25;CL:0000827!1.42e-07!25;CL:0000625!5.86e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000791;6.55e-10;18!CL:0000789;6.55e-10;18!CL:0002419;6.55e-10;18!CL:0000084;9.33e-08;25!CL:0000625;5.03e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,9.17e-10,18;CL:0000789,9.17e-10,18;CL:0002420,9.17e-10,18;CL:0002419,9.17e-10,18;CL:0000790,9.17e-10,18;CL:0000084,1.29e-07,25;CL:0000827,1.29e-07,25;CL:0000625,5.83e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;6.55e-10;18!UBERON:0006601;6.89e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.72e-30!115;UBERON:0001049!1.49e-25!57;UBERON:0005068!1.49e-25!57;UBERON:0006241!1.49e-25!57;UBERON:0007135!1.49e-25!57;UBERON:0002616!2.89e-22!59;UBERON:0003080!3.64e-22!42;UBERON:0001017!9.04e-22!82;UBERON:0002780!1.51e-21!41;UBERON:0001890!1.51e-21!41;UBERON:0006240!1.51e-21!41;UBERON:0000955!1.97e-21!69;UBERON:0006238!1.97e-21!69;UBERON:0005743!6.64e-20!86;UBERON:0000073!4.27e-19!94;UBERON:0001016!4.27e-19!94;UBERON:0002020!1.28e-18!34;UBERON:0003528!1.28e-18!34;UBERON:0001893!2.45e-18!34;UBERON:0001869!4.17e-18!32;UBERON:0002791!1.02e-17!33;UBERON:0003075!5.58e-17!86;UBERON:0007284!5.58e-17!86;UBERON:0002346!6.75e-16!90;UBERON:0002619!2.91e-14!22;UBERON:0000956!3.20e-14!25;UBERON:0000203!3.20e-14!25;UBERON:0000153!4.12e-14!129;UBERON:0007811!4.12e-14!129;UBERON:0001950!4.39e-13!20;UBERON:0003056!1.07e-12!61;UBERON:0000033!1.21e-12!123;UBERON:0004121!1.32e-11!169;UBERON:0000924!3.95e-11!173;UBERON:0006601!3.95e-11!173 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.70e-16;32!UBERON:0003528;2.94e-16;34!UBERON:0002020;2.94e-16;34!UBERON:0002791;4.93e-16;32!UBERON:0001893;6.66e-16;34!UBERON:0002780;8.69e-16;41!UBERON:0001890;8.69e-16;41!UBERON:0002619;2.10e-14;22!UBERON:0000956;2.92e-14;25!UBERON:0000203;2.92e-14;25!UBERON:0000073;7.62e-14;53!UBERON:0002616;7.62e-14;53!UBERON:0001950;3.32e-13;20!UBERON:0000955;2.46e-10;68!UBERON:0001017;9.32e-10;75!UBERON:0001016;5.41e-09;83!UBERON:0007023;2.13e-08;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,8.71e-30,114;UBERON:0001049,7.02e-25,56;UBERON:0005068,7.02e-25,56;UBERON:0006241,7.02e-25,56;UBERON:0007135,7.02e-25,56;UBERON:0000073,3.69e-23,53;UBERON:0002616,3.69e-23,53;UBERON:0002780,1.48e-21,41;UBERON:0001890,1.48e-21,41;UBERON:0003080,1.48e-21,41;UBERON:0006240,1.48e-21,41;UBERON:0001017,3.61e-21,81;UBERON:0000955,8.22e-21,68;UBERON:0006238,8.22e-21,68;UBERON:0001016,3.39e-20,89;UBERON:0003528,1.26e-18,34;UBERON:0002020,1.26e-18,34;UBERON:0001893,2.41e-18,34;UBERON:0001869,4.11e-18,32;UBERON:0002791,1.93e-17,32;UBERON:0003075,6.96e-15,82;UBERON:0007284,6.96e-15,82;UBERON:0002619,2.87e-14,22;UBERON:0000956,3.17e-14,25;UBERON:0000203,3.17e-14,25;UBERON:0002346,7.02e-14,86;UBERON:0001950,4.35e-13,20;UBERON:0003056,1.86e-12,61;UBERON:0010314,9.62e-11,132;UBERON:0010371,1.33e-09,104;UBERON:0004121,1.34e-09,171;UBERON:0000924,1.34e-09,171;UBERON:0006601,1.34e-09,171;UBERON:0011216,3.20e-08,223 | |||
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| ||
|short_description=p2@FAM190B | |||
}} | }} |
Latest revision as of 16:57, 19 September 2015
Short description: | p2@FAM190B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM190B_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000359979_5end |
EntrezGene: | FAM190B |
HGNC: | 29197 |
UniProt: | Q9H7U1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 9.17e-10 | 18 |
alpha-beta T cell | 9.17e-10 | 18 |
immature T cell | 9.17e-10 | 18 |
mature T cell | 9.17e-10 | 18 |
immature alpha-beta T cell | 9.17e-10 | 18 |
T cell | 1.29e-07 | 25 |
pro-T cell | 1.29e-07 | 25 |
CD8-positive, alpha-beta T cell | 5.83e-07 | 11 |