FFCP PHASE1:Hg19::chr10:88717384..88717401,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:88717384..88717401,- to FFCP PHASE1:Hg19::chr10:88717384..88717401,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79812 | |EntrezGene=79812 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19888 | |HGNC=19888 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H8L6 | |UniProt=Q9H8L6 | ||
|association_with_transcript=-12bp_to_ENST00000372027_5end | |||
|cluster_id=chr10:88717384..88717401,- | |||
|coexpression_cluster_id=C140 | |||
|description=CAGE_peak_3_at_MMRN2_5end | |||
|id=chr10:88717384..88717401,- | |||
|ontology_enrichment_celltype=CL:0002139!3.99e-30!24;CL:0000115!5.25e-30!35;CL:0000071!3.61e-23!18;CL:0002546!3.61e-23!18;CL:0002078!1.12e-22!44;CL:0000213!7.83e-15!57;CL:0000215!7.83e-15!57;CL:1000413!1.51e-12!9;CL:0002543!6.52e-09!6;CL:0002544!7.71e-09!6;CL:0005020!1.71e-08!6;CL:0002138!1.71e-08!6;CL:0005022!1.71e-08!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;2.73e-56;24!CL:0000115;1.58e-48;36!CL:0000071;7.11e-43;18!CL:0002078;5.04e-28;45!CL:1000413;1.43e-22;9!CL:0000213;7.65e-20;58!CL:0000215;7.65e-20;58!CL:0002543;1.45e-15;6!CL:0002544;1.74e-15;6!CL:0002138;7.99e-15;6!CL:0002188;7.24e-09;5!CL:0002618;1.65e-08;3!CL:0002144;5.53e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.69e-57,36;CL:0002139,2.52e-56,24;CL:0002078,4.55e-44,45;CL:0000071,6.16e-43,18;CL:0002546,6.16e-43,18;CL:0000213,4.56e-32,58;CL:0000215,4.56e-32,58;CL:1000413,1.53e-22,9;CL:0002543,1.35e-15,6;CL:0002544,1.86e-15,6;CL:0005020,8.53e-15,6;CL:0002138,8.53e-15,6;CL:0005022,8.53e-15,6;CL:0000222,7.96e-11,121;CL:0002188,6.98e-09,5;CL:0000076,1.39e-08,63;CL:0002618,1.57e-08,3;CL:0002144,4.80e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;7.11e-43;18!CL:0005022;7.99e-15;6!UBERON:0004872;2.49e-08;7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.71e-46!115;UBERON:0004111!4.31e-25!241;UBERON:0001986!3.61e-23!18;UBERON:0004638!3.61e-23!18;UBERON:0004852!3.61e-23!18;UBERON:0000025!7.86e-22!194;UBERON:0000477!2.13e-21!286;UBERON:0000487!1.20e-17!22;UBERON:0006914!4.13e-16!25;UBERON:0001049!5.62e-14!57;UBERON:0005068!5.62e-14!57;UBERON:0006241!5.62e-14!57;UBERON:0007135!5.62e-14!57;UBERON:0000055!5.41e-13!69;UBERON:0003915!1.51e-12!9;UBERON:0004700!1.51e-12!9;UBERON:0001917!1.51e-12!9;UBERON:0004872!1.66e-12!84;UBERON:0000119!1.50e-11!312;UBERON:0000483!1.58e-11!309;UBERON:0002616!1.74e-11!59;UBERON:0003103!4.19e-11!69;UBERON:0003075!5.79e-11!86;UBERON:0007284!5.79e-11!86;UBERON:0003080!7.90e-11!42;UBERON:0001009!2.46e-10!113;UBERON:0003914!2.60e-10!118;UBERON:0002780!4.54e-10!41;UBERON:0001890!4.54e-10!41;UBERON:0006240!4.54e-10!41;UBERON:0002346!5.82e-10!90;UBERON:0002049!6.14e-10!79;UBERON:0007798!6.14e-10!79;UBERON:0001981!9.72e-10!60;UBERON:0007500!9.72e-10!60;UBERON:0004537!9.72e-10!60;UBERON:0006965!9.72e-10!60;UBERON:0001017!1.05e-09!82;UBERON:0000955!1.33e-09!69;UBERON:0006238!1.33e-09!69;UBERON:0005743!1.64e-09!86;UBERON:0002020!4.15e-09!34;UBERON:0003528!4.15e-09!34;UBERON:0001893!6.39e-09!34;UBERON:0004535!8.30e-09!110;UBERON:0002791!2.13e-08!33;UBERON:0000468!4.12e-08!659;UBERON:0001869!4.13e-08!32;UBERON:0007100!9.14e-08!27;UBERON:0000073!1.23e-07!94;UBERON:0001016!1.23e-07!94;UBERON:0002465!2.11e-07!10;UBERON:0001638!2.61e-07!9;UBERON:0003920!2.61e-07!9;UBERON:0004582!2.61e-07!9;UBERON:0002298!5.79e-07!8;UBERON:0002619!6.29e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;7.11e-43;18!UBERON:0001986;7.11e-43;18!UBERON:0004852;7.11e-43;18!UBERON:0000487;4.61e-34;22!UBERON:0006914;2.60e-29;25!UBERON:0003915;1.43e-22;9!UBERON:0004700;1.43e-22;9!UBERON:0001917;1.43e-22;9!UBERON:0000490;2.73e-19;33!UBERON:0000055;1.23e-13;65!UBERON:0001638;2.62e-13;9!UBERON:0003920;2.62e-13;9!UBERON:0004582;2.62e-13;9!UBERON:0001473;6.74e-11;8!UBERON:0004536;6.74e-11;8!UBERON:0006558;6.74e-11;8!UBERON:0007500;2.07e-10;56!UBERON:0001981;2.07e-10;56!UBERON:0004537;2.07e-10;56!UBERON:0007100;8.75e-09;25!UBERON:0002049;1.49e-08;75!UBERON:0007798;1.49e-08;75!UBERON:0002465;1.52e-08;10!UBERON:0001009;2.20e-08;112!UBERON:0004151;4.20e-08;3!UBERON:0010523;5.53e-08;3!UBERON:0001915;5.53e-08;3!UBERON:0001982;5.53e-08;3!UBERON:0006947;7.34e-08;3!UBERON:0004054;7.34e-08;3!UBERON:0004535;7.55e-08;109!UBERON:0003914;1.53e-07;74 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,6.16e-43,18;UBERON:0001986,6.16e-43,18;UBERON:0004852,6.16e-43,18;UBERON:0000487,4.11e-34,22;UBERON:0006914,2.35e-29,25;UBERON:0000055,2.05e-25,68;UBERON:0004872,1.75e-23,83;UBERON:0001009,7.90e-23,112;UBERON:0003915,1.53e-22,9;UBERON:0004700,1.53e-22,9;UBERON:0001917,1.53e-22,9;UBERON:0002049,5.25e-21,78;UBERON:0007798,5.25e-21,78;UBERON:0004535,1.44e-19,109;UBERON:0003914,1.09e-18,117;UBERON:0007500,2.27e-18,59;UBERON:0001981,2.27e-18,59;UBERON:0004537,2.27e-18,59;UBERON:0006965,2.27e-18,59;UBERON:0004111,3.14e-15,240;UBERON:0001638,2.23e-13,9;UBERON:0003920,2.23e-13,9;UBERON:0004582,2.23e-13,9;UBERON:0003887,1.68e-12,12;UBERON:0007023,8.72e-12,114;UBERON:0000025,6.66e-11,192;UBERON:0001473,7.06e-11,8;UBERON:0004536,7.06e-11,8;UBERON:0006558,7.06e-11,8;UBERON:0003103,1.10e-10,68;UBERON:0004876,1.59e-10,11;UBERON:0003081,5.30e-10,203;UBERON:0000080,7.36e-10,9;UBERON:0002120,7.36e-10,9;UBERON:0004875,7.36e-10,9;UBERON:0005721,7.36e-10,9;UBERON:0005754,7.36e-10,9;UBERON:0007297,7.36e-10,9;UBERON:0007100,1.70e-09,27;UBERON:0000058,2.46e-09,19;UBERON:0002465,1.58e-08,10;UBERON:0000926,2.85e-08,315;UBERON:0004120,2.85e-08,315;UBERON:0006603,2.85e-08,315;UBERON:0004151,3.52e-08,3;UBERON:0010523,4.80e-08,3;UBERON:0001915,4.80e-08,3;UBERON:0001982,4.80e-08,3;UBERON:0005103,5.94e-08,8;UBERON:0000083,5.94e-08,8;UBERON:0009201,5.94e-08,8;UBERON:0006553,5.94e-08,8;UBERON:0003074,5.94e-08,8;UBERON:0003060,5.94e-08,8;UBERON:0006947,7.53e-08,3;UBERON:0004054,7.53e-08,3 | |||
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| ||
|short_description=p3@MMRN2 | |||
}} | }} |
Latest revision as of 18:10, 19 September 2015
Short description: | p3@MMRN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MMRN2_5end |
Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
Association with transcript: | -12bp_to_ENST00000372027_5end |
EntrezGene: | MMRN2 |
HGNC: | 19888 |
UniProt: | Q9H8L6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.69e-57 | 36 |
endothelial cell of vascular tree | 2.52e-56 | 24 |
meso-epithelial cell | 4.55e-44 | 45 |
blood vessel endothelial cell | 6.16e-43 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.16e-43 | 18 |
lining cell | 4.56e-32 | 58 |
barrier cell | 4.56e-32 | 58 |
endothelial cell of artery | 1.53e-22 | 9 |
vein endothelial cell | 1.35e-15 | 6 |
aortic endothelial cell | 1.86e-15 | 6 |
lymphangioblast | 8.53e-15 | 6 |
endothelial cell of lymphatic vessel | 8.53e-15 | 6 |
vascular lymphangioblast | 8.53e-15 | 6 |
mesodermal cell | 7.96e-11 | 121 |
glomerular endothelial cell | 6.98e-09 | 5 |
squamous epithelial cell | 1.39e-08 | 63 |
endothelial cell of umbilical vein | 1.57e-08 | 3 |
capillary endothelial cell | 4.80e-08 | 3 |