FFCP PHASE1:Hg19::chr5:113769205..113769213,+: Difference between revisions
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|id=chr5:113769205..113769213,+
|short_description=p9@KCNN2
|description=CAGE_peak_9_at_KCNN2_5end
|association_with_transcript=-13bp_to_ENST00000503706,NM_170775,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3781 | |EntrezGene=3781 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6291 | |HGNC=6291 | ||
|TSSclassifier=strong | |||
|UniProt=Q6PJI0,Q9H2S1 | |UniProt=Q6PJI0,Q9H2S1 | ||
|association_with_transcript=-13bp_to_ENST00000503706,NM_170775,uc003kqp.2,uc010jcg.2_5end | |||
|cluster_id=chr5:113769205..113769213,+ | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_9_at_KCNN2_5end | |||
|id=chr5:113769205..113769213,+ | |||
|ontology_enrichment_celltype=CL:0002150!7.00e-11!3;CL:0000861!7.00e-11!3 | |||
|ontology_enrichment_celltype_v019=CL:0002097;7.79e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002097,8.09e-09,2;CL:0000763,2.02e-08,108;CL:0000049,2.02e-08,108 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.43e-16;1 | |||
|ontology_enrichment_disease=DOID:8692!4.16e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;5.65e-30;31!DOID:1240;3.60e-18;39!DOID:2531;2.98e-09;51!DOID:0060083;2.98e-09;51 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,3.68e-31,31;DOID:1240,1.14e-24,39;DOID:2531,9.71e-19,51;DOID:0060083,9.71e-19,51;DOID:0050686,3.20e-08,137 | |||
|ontology_enrichment_uberon=UBERON:0002298!6.30e-22!8;UBERON:0003076!8.46e-19!15;UBERON:0003057!8.46e-19!15;UBERON:0001049!3.36e-16!57;UBERON:0005068!3.36e-16!57;UBERON:0006241!3.36e-16!57;UBERON:0007135!3.36e-16!57;UBERON:0004732!3.10e-13!13;UBERON:0001017!1.46e-12!82;UBERON:0002240!2.05e-12!3;UBERON:0001896!3.23e-12!3;UBERON:0005290!3.23e-12!3;UBERON:0010096!3.23e-12!3;UBERON:0003075!4.49e-12!86;UBERON:0007284!4.49e-12!86;UBERON:0005743!8.91e-12!86;UBERON:0006331!9.56e-12!3;UBERON:0000073!1.42e-11!94;UBERON:0001016!1.42e-11!94;UBERON:0002346!2.46e-11!90;UBERON:0000988!2.48e-11!3;UBERON:0004733!1.40e-10!12;UBERON:0002028!1.40e-10!12;UBERON:0007277!1.40e-10!12;UBERON:0002616!3.32e-10!59;UBERON:0007023!4.11e-10!115;UBERON:0000955!2.35e-09!69;UBERON:0006238!2.35e-09!69;UBERON:0001897!2.01e-08!2;UBERON:0002148!2.51e-08!2;UBERON:0009662!2.51e-08!2;UBERON:0005174!1.32e-07!5;UBERON:0001137!1.32e-07!5;UBERON:0002020!8.51e-07!34;UBERON:0003528!8.51e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;2.43e-16;1!UBERON:0001785;2.43e-16;1!UBERON:0002464;2.43e-16;1!UBERON:0004904;2.43e-16;1!UBERON:0001021;2.43e-16;1!UBERON:0001954;6.17e-09;2!UBERON:0003022;6.17e-09;2!UBERON:0002421;6.17e-09;2!UBERON:0002600;6.17e-09;2!UBERON:0003714;7.79e-09;2!UBERON:0005162;7.79e-09;2!UBERON:0000122;7.79e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,2.25e-16,1;UBERON:0001785,2.25e-16,1;UBERON:0002464,2.25e-16,1;UBERON:0004904,2.25e-16,1;UBERON:0001021,2.25e-16,1;UBERON:0003902,2.25e-16,1;UBERON:0005425,2.25e-16,1;UBERON:0001954,5.94e-09,2;UBERON:0003022,5.94e-09,2;UBERON:0002421,5.94e-09,2;UBERON:0002600,5.94e-09,2;UBERON:0003714,7.49e-09,2;UBERON:0005162,7.49e-09,2;UBERON:0000122,7.49e-09,2 | |||
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| ||
|short_description=p9@KCNN2 | |||
}} | }} |
Latest revision as of 19:09, 19 September 2015
Short description: | p9@KCNN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_KCNN2_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | -13bp_to_ENST00000503706, NM_170775, uc003kqp.2, uc010jcg.2_5end |
EntrezGene: | KCNN2 |
HGNC: | 6291 |
UniProt: | Q6PJI0Q9H2S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cortical cell of adrenal gland | 8.09e-09 | 2 |
myeloid cell | 2.02e-08 | 108 |
common myeloid progenitor | 2.02e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 2.25e-16 | 1 |
cranial nerve | 2.25e-16 | 1 |
nerve trunk | 2.25e-16 | 1 |
nerve connecting eye with brain | 2.25e-16 | 1 |
nerve | 2.25e-16 | 1 |
retinal neural layer | 2.25e-16 | 1 |
presumptive neural retina | 2.25e-16 | 1 |
Ammon's horn | 5.94e-09 | 2 |
lobe parts of cerebral cortex | 5.94e-09 | 2 |
hippocampal formation | 5.94e-09 | 2 |
limbic lobe | 5.94e-09 | 2 |
neural tissue | 7.49e-09 | 2 |
multi cell component structure | 7.49e-09 | 2 |
neuron projection bundle | 7.49e-09 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 3.68e-31 | 31 |
leukemia | 1.14e-24 | 39 |
hematologic cancer | 9.71e-19 | 51 |
immune system cancer | 9.71e-19 | 51 |
organ system cancer | 3.20e-08 | 137 |