FFCP PHASE1:Hg19::chr5:114505591..114505614,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr5:114505591..114505614,-
|short_description=p1@TRIM36
|description=CAGE_peak_1_at_TRIM36_5end
|association_with_transcript=0bp_to_ENST00000508894_5end
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55521 | |EntrezGene=55521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16280 | |HGNC=16280 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAU9 | |UniProt=D6RAU9 | ||
|association_with_transcript=0bp_to_ENST00000508894_5end | |||
|cluster_id=chr5:114505591..114505614,- | |||
|description=CAGE_peak_1_at_TRIM36_5end | |||
|id=chr5:114505591..114505614,- | |||
|ontology_enrichment_celltype=CL:0002009!8.13e-20!65;CL:0000557!3.82e-19!71;CL:0002194!1.37e-18!63;CL:0000576!1.37e-18!63;CL:0000040!1.37e-18!63;CL:0000559!1.37e-18!63;CL:0000766!3.10e-16!76;CL:0000839!4.14e-16!70;CL:0000860!3.02e-15!45;CL:0002057!1.44e-14!42;CL:0000763!2.57e-10!112;CL:0000049!2.57e-10!112;CL:0000738!4.28e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.65e-15;33!CL:0002057;3.65e-15;33!CL:0000473;1.79e-14;39!CL:0000234;1.79e-14;39!CL:0000576;1.28e-10;48!CL:0000766;1.16e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,2.56e-22,61;CL:0000557,2.05e-21,67;CL:0002194,6.28e-21,59;CL:0000576,6.28e-21,59;CL:0000040,6.28e-21,59;CL:0000559,6.28e-21,59;CL:0000839,2.28e-18,66;CL:0000473,3.13e-18,48;CL:0000234,3.13e-18,48;CL:0000766,2.08e-17,72;CL:0000860,5.41e-16,42;CL:0002057,5.41e-16,42;CL:0000763,2.54e-11,108;CL:0000049,2.54e-11,108;CL:0000738,3.64e-08,136;CL:0002031,3.47e-07,120;CL:0002087,5.40e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;1.13e-11;42 | |||
|ontology_enrichment_disease=DOID:305!5.15e-10!106;DOID:0050687!6.49e-10!143;DOID:162!5.31e-09!235;DOID:14566!8.14e-09!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,5.24e-08,106;DOID:0050687,1.23e-07,143;DOID:162,8.84e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0005743!5.87e-28!86;UBERON:0001017!5.70e-27!82;UBERON:0000073!1.45e-26!94;UBERON:0001016!1.45e-26!94;UBERON:0001049!2.31e-24!57;UBERON:0005068!2.31e-24!57;UBERON:0006241!2.31e-24!57;UBERON:0007135!2.31e-24!57;UBERON:0002780!1.78e-22!41;UBERON:0001890!1.78e-22!41;UBERON:0006240!1.78e-22!41;UBERON:0003080!2.65e-22!42;UBERON:0000955!1.31e-20!69;UBERON:0006238!1.31e-20!69;UBERON:0002346!1.58e-20!90;UBERON:0003075!2.77e-20!86;UBERON:0007284!2.77e-20!86;UBERON:0003056!1.43e-19!61;UBERON:0002616!8.49e-19!59;UBERON:0001893!1.03e-18!34;UBERON:0002020!1.20e-18!34;UBERON:0003528!1.20e-18!34;UBERON:0002791!4.46e-18!33;UBERON:0001869!1.12e-17!32;UBERON:0001474!2.17e-15!86;UBERON:0002371!4.07e-15!80;UBERON:0000956!5.14e-15!25;UBERON:0000203!5.14e-15!25;UBERON:0002619!4.22e-14!22;UBERON:0000924!1.43e-13!173;UBERON:0006601!1.43e-13!173;UBERON:0004121!3.51e-13!169;UBERON:0001950!6.40e-13!20;UBERON:0000033!1.10e-12!123;UBERON:0004765!3.30e-12!101;UBERON:0001434!3.30e-12!101;UBERON:0000062!5.35e-12!511;UBERON:0000922!6.40e-12!612;UBERON:0000153!6.95e-12!129;UBERON:0007811!6.95e-12!129;UBERON:0007023!8.87e-12!115;UBERON:0002390!1.22e-11!102;UBERON:0003061!1.22e-11!102;UBERON:0000923!3.87e-10!604;UBERON:0005291!3.87e-10!604;UBERON:0006598!3.87e-10!604;UBERON:0002532!3.87e-10!604;UBERON:0002050!4.06e-10!605;UBERON:0005423!4.06e-10!605;UBERON:0002193!1.20e-08!112;UBERON:0002405!4.86e-07!115;UBERON:0000480!7.35e-07!626;UBERON:0000467!9.48e-07!625 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;4.78e-18;41!UBERON:0001890;4.78e-18;41!UBERON:0001893;7.15e-18;34!UBERON:0001869;8.03e-18;32!UBERON:0003528;8.43e-18;34!UBERON:0002020;8.43e-18;34!UBERON:0002791;1.47e-17;32!UBERON:0000956;1.70e-16;25!UBERON:0000203;1.70e-16;25!UBERON:0002619;1.82e-15;22!UBERON:0000073;8.58e-15;53!UBERON:0002616;8.58e-15;53!UBERON:0001950;3.66e-14;20!UBERON:0001017;9.17e-11;75!UBERON:0000955;9.73e-11;68!UBERON:0001016;7.92e-10;83 | |||
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| ||
|short_description=p1@TRIM36 | |||
}} | }} |
Latest revision as of 19:27, 19 September 2015
Short description: | p1@TRIM36 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRIM36_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508894_5end |
EntrezGene: | TRIM36 |
HGNC: | 16280 |
UniProt: | D6RAU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 2.56e-22 | 61 |
granulocyte monocyte progenitor cell | 2.05e-21 | 67 |
monopoietic cell | 6.28e-21 | 59 |
monocyte | 6.28e-21 | 59 |
monoblast | 6.28e-21 | 59 |
promonocyte | 6.28e-21 | 59 |
myeloid lineage restricted progenitor cell | 2.28e-18 | 66 |
defensive cell | 3.13e-18 | 48 |
phagocyte | 3.13e-18 | 48 |
myeloid leukocyte | 2.08e-17 | 72 |
classical monocyte | 5.41e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.41e-16 | 42 |
myeloid cell | 2.54e-11 | 108 |
common myeloid progenitor | 2.54e-11 | 108 |
leukocyte | 3.64e-08 | 136 |
hematopoietic lineage restricted progenitor cell | 3.47e-07 | 120 |
nongranular leukocyte | 5.40e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 5.24e-08 | 106 |
cell type cancer | 1.23e-07 | 143 |
cancer | 8.84e-07 | 235 |