FFCP PHASE1:Hg19::chrX:148586804..148586877,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3423 | |EntrezGene=3423 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5389 | |HGNC=5389 | ||
|TSSclassifier=strong | |||
|UniProt=P22304,O60597 | |UniProt=P22304,O60597 | ||
|association_with_transcript=0bp_to_ENST00000340855,ENST00000370441,ENST00000428056,ENST00000466323,uc011mxe.1,uc011mxf.1,uc011mxg.1,uc011mxh.1,uc011mxi.1,uc011mxj.1_5end | |association_with_transcript=0bp_to_ENST00000340855,ENST00000370441,ENST00000428056,ENST00000466323,uc011mxe.1,uc011mxf.1,uc011mxg.1,uc011mxh.1,uc011mxi.1,uc011mxj.1_5end | ||
|cluster_id=chrX:148586804..148586877,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_1_at_IDS_5end | |description=CAGE_peak_1_at_IDS_5end | ||
|id=chrX:148586804..148586877,- | |id=chrX:148586804..148586877,- | ||
|ontology_enrichment_celltype=CL:0000738!2.00e-17!140;CL:0000766!2.19e-15!76;CL:0002057!1.35e-13!42;CL:0000557!7.77e-13!71;CL:0002031!1.43e-12!124;CL:0002087!5.94e-12!119;CL:0002009!1.37e-10!65;CL:0000860!1.63e-10!45;CL:0000839!1.86e-10!70;CL:0002194!5.73e-10!63;CL:0000576!5.73e-10!63;CL:0000040!5.73e-10!63;CL:0000559!5.73e-10!63;CL:0000037!2.43e-08!172;CL:0000566!2.43e-08!172;CL:0000988!1.07e-07!182;CL:0002032!1.14e-07!165;CL:0000837!1.14e-07!165 | |ontology_enrichment_celltype=CL:0000738!2.00e-17!140;CL:0000766!2.19e-15!76;CL:0002057!1.35e-13!42;CL:0000557!7.77e-13!71;CL:0002031!1.43e-12!124;CL:0002087!5.94e-12!119;CL:0002009!1.37e-10!65;CL:0000860!1.63e-10!45;CL:0000839!1.86e-10!70;CL:0002194!5.73e-10!63;CL:0000576!5.73e-10!63;CL:0000040!5.73e-10!63;CL:0000559!5.73e-10!63;CL:0000037!2.43e-08!172;CL:0000566!2.43e-08!172;CL:0000988!1.07e-07!182;CL:0002032!1.14e-07!165;CL:0000837!1.14e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.44e-13;33!CL:0002057;3.44e-13;33!CL:0000473;8.37e-12;39!CL:0000234;8.37e-12;39!CL:0000766;2.47e-08;69!CL:0000576;1.91e-07;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.12e-19,136;CL:0000766,7.34e-18,72;CL:0000557,4.02e-15,67;CL:0000473,1.59e-14,48;CL:0000234,1.59e-14,48;CL:0002031,3.82e-14,120;CL:0000860,1.35e-13,42;CL:0002057,1.35e-13,42;CL:0002087,1.64e-13,115;CL:0002009,1.03e-12,61;CL:0000839,1.86e-12,66;CL:0002194,4.80e-12,59;CL:0000576,4.80e-12,59;CL:0000040,4.80e-12,59;CL:0000559,4.80e-12,59;CL:0000037,2.45e-09,168;CL:0000988,7.53e-09,177;CL:0002032,1.24e-08,161;CL:0000837,1.24e-08,161 | |||
|ontology_enrichment_development_v019=CL:0002057;2.82e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.77e-32!115;UBERON:0001049!4.19e-27!57;UBERON:0005068!4.19e-27!57;UBERON:0006241!4.19e-27!57;UBERON:0007135!4.19e-27!57;UBERON:0003080!4.18e-23!42;UBERON:0002780!7.48e-23!41;UBERON:0001890!7.48e-23!41;UBERON:0006240!7.48e-23!41;UBERON:0001017!1.12e-22!82;UBERON:0002616!6.11e-22!59;UBERON:0000955!1.55e-21!69;UBERON:0006238!1.55e-21!69;UBERON:0005743!1.63e-21!86;UBERON:0000073!4.96e-20!94;UBERON:0001016!4.96e-20!94;UBERON:0003075!8.80e-20!86;UBERON:0007284!8.80e-20!86;UBERON:0002020!2.38e-19!34;UBERON:0003528!2.38e-19!34;UBERON:0001893!2.55e-19!34;UBERON:0002791!1.15e-18!33;UBERON:0001869!1.44e-18!32;UBERON:0002346!2.31e-17!90;UBERON:0002619!1.63e-15!22;UBERON:0003056!2.90e-15!61;UBERON:0000956!3.18e-14!25;UBERON:0000203!3.18e-14!25;UBERON:0001950!3.61e-14!20;UBERON:0002390!4.43e-14!102;UBERON:0003061!4.43e-14!102;UBERON:0002193!1.87e-11!112;UBERON:0002371!2.25e-11!80;UBERON:0000033!5.87e-11!123;UBERON:0000153!7.26e-11!129;UBERON:0007811!7.26e-11!129;UBERON:0001474!4.65e-10!86;UBERON:0004121!7.64e-09!169;UBERON:0004765!1.86e-08!101;UBERON:0001434!1.86e-08!101;UBERON:0000924!7.02e-08!173;UBERON:0006601!7.02e-08!173;UBERON:0002420!7.60e-07!9;UBERON:0007245!7.60e-07!9;UBERON:0010009!7.60e-07!9;UBERON:0010011!7.60e-07!9;UBERON:0000454!7.60e-07!9 | |ontology_enrichment_uberon=UBERON:0007023!3.77e-32!115;UBERON:0001049!4.19e-27!57;UBERON:0005068!4.19e-27!57;UBERON:0006241!4.19e-27!57;UBERON:0007135!4.19e-27!57;UBERON:0003080!4.18e-23!42;UBERON:0002780!7.48e-23!41;UBERON:0001890!7.48e-23!41;UBERON:0006240!7.48e-23!41;UBERON:0001017!1.12e-22!82;UBERON:0002616!6.11e-22!59;UBERON:0000955!1.55e-21!69;UBERON:0006238!1.55e-21!69;UBERON:0005743!1.63e-21!86;UBERON:0000073!4.96e-20!94;UBERON:0001016!4.96e-20!94;UBERON:0003075!8.80e-20!86;UBERON:0007284!8.80e-20!86;UBERON:0002020!2.38e-19!34;UBERON:0003528!2.38e-19!34;UBERON:0001893!2.55e-19!34;UBERON:0002791!1.15e-18!33;UBERON:0001869!1.44e-18!32;UBERON:0002346!2.31e-17!90;UBERON:0002619!1.63e-15!22;UBERON:0003056!2.90e-15!61;UBERON:0000956!3.18e-14!25;UBERON:0000203!3.18e-14!25;UBERON:0001950!3.61e-14!20;UBERON:0002390!4.43e-14!102;UBERON:0003061!4.43e-14!102;UBERON:0002193!1.87e-11!112;UBERON:0002371!2.25e-11!80;UBERON:0000033!5.87e-11!123;UBERON:0000153!7.26e-11!129;UBERON:0007811!7.26e-11!129;UBERON:0001474!4.65e-10!86;UBERON:0004121!7.64e-09!169;UBERON:0004765!1.86e-08!101;UBERON:0001434!1.86e-08!101;UBERON:0000924!7.02e-08!173;UBERON:0006601!7.02e-08!173;UBERON:0002420!7.60e-07!9;UBERON:0007245!7.60e-07!9;UBERON:0010009!7.60e-07!9;UBERON:0010011!7.60e-07!9;UBERON:0000454!7.60e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.20e-17;32!UBERON:0002780;1.10e-16;41!UBERON:0001890;1.10e-16;41!UBERON:0003528;1.20e-16;34!UBERON:0002020;1.20e-16;34!UBERON:0001893;1.22e-16;34!UBERON:0002791;1.55e-16;32!UBERON:0002619;1.62e-15;22!UBERON:0000073;1.05e-14;53!UBERON:0002616;1.05e-14;53!UBERON:0000956;3.00e-14;25!UBERON:0000203;3.00e-14;25!UBERON:0001950;3.59e-14;20!UBERON:0000955;2.65e-10;68!UBERON:0001017;4.10e-10;75!UBERON:0001016;2.72e-09;83!UBERON:0007023;1.33e-08;114!UBERON:0002420;7.70e-07;9!UBERON:0007245;7.70e-07;9!UBERON:0010009;7.70e-07;9!UBERON:0010011;7.70e-07;9!UBERON:0000454;7.70e-07;9 | |||
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| ||
|short_description=p1@IDS | |short_description=p1@IDS | ||
}} | }} |
Latest revision as of 21:34, 19 September 2015
Short description: | p1@IDS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IDS_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000340855, ENST00000370441, ENST00000428056, ENST00000466323, uc011mxe.1, uc011mxf.1, uc011mxg.1, uc011mxh.1, uc011mxi.1, uc011mxj.1_5end |
EntrezGene: | IDS |
HGNC: | 5389 |
UniProt: | P22304O60597 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 3.12e-19 | 136 |
myeloid leukocyte | 7.34e-18 | 72 |
granulocyte monocyte progenitor cell | 4.02e-15 | 67 |
defensive cell | 1.59e-14 | 48 |
phagocyte | 1.59e-14 | 48 |
hematopoietic lineage restricted progenitor cell | 3.82e-14 | 120 |
classical monocyte | 1.35e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-13 | 42 |
nongranular leukocyte | 1.64e-13 | 115 |
macrophage dendritic cell progenitor | 1.03e-12 | 61 |
myeloid lineage restricted progenitor cell | 1.86e-12 | 66 |
monopoietic cell | 4.80e-12 | 59 |
monocyte | 4.80e-12 | 59 |
monoblast | 4.80e-12 | 59 |
promonocyte | 4.80e-12 | 59 |
hematopoietic stem cell | 2.45e-09 | 168 |
hematopoietic cell | 7.53e-09 | 177 |
hematopoietic oligopotent progenitor cell | 1.24e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.24e-08 | 161 |